Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11h21r
(699 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 387 e-108
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 65 4e-11
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 65 5e-11
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 62 4e-10
Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical ... 29 2.4
Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical pr... 29 3.2
U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical pr... 29 4.2
U23513-1|ABD94110.1| 294|Caenorhabditis elegans Hypothetical pr... 29 4.2
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 28 7.4
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 7.4
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z50797-5|CAA90675.1| 342|Caenorhabditis elegans Hypothetical pr... 27 9.8
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 27 9.8
AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical ... 27 9.8
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 27 9.8
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 387 bits (952), Expect = e-108
Identities = 188/215 (87%), Positives = 200/215 (93%)
Frame = -1
Query: 699 FTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDP 520
FTQAGSEVSALLGRIPSAVGYQPTLATDMG+MQERITTTKKGSITSVQAIYVPADDLTDP
Sbjct: 320 FTQAGSEVSALLGRIPSAVGYQPTLATDMGSMQERITTTKKGSITSVQAIYVPADDLTDP 379
Query: 519 APATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQD 340
APATTFAHLDATTVLSR IAEL IYPAVDPLDSTSRIMDPN++G HY++ARGVQKILQD
Sbjct: 380 APATTFAHLDATTVLSRGIAELAIYPAVDPLDSTSRIMDPNVVGQNHYDIARGVQKILQD 439
Query: 339 YKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTGHAGKLVPLEETIKG 160
YKSLQDIIAILGMDELSEEDKLTV+RARKIQRFLSQPFQVAEVFTGH GK V LEETI+G
Sbjct: 440 YKSLQDIIAILGMDELSEEDKLTVSRARKIQRFLSQPFQVAEVFTGHQGKFVSLEETIRG 499
Query: 159 FSKILAGDYDHLPEVAFYMVGPIEEVVAKADTLAK 55
F+ IL G+ DHLPEVAFYM G I++V KA+ LAK
Sbjct: 500 FTMILKGELDHLPEVAFYMQGGIDDVFKKAEELAK 534
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 65.3 bits (152), Expect = 4e-11
Identities = 43/163 (26%), Positives = 82/163 (50%), Gaps = 7/163 (4%)
Frame = -1
Query: 699 FTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK--KGSITSVQAIYVPADDLT 526
+ +A E+SA +P G+ + TD+ T+ ER K +GSIT + + +P +D+T
Sbjct: 295 YAEALREISAAREEVPGRRGFPGYMYTDLATIYERAGRVKGREGSITQIPILTMPNNDIT 354
Query: 525 DPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIM----DPNIIGAEHYNVARGV 358
P P T + + + + + IYP +D L S SR+M + +H +++ +
Sbjct: 355 HPIPDLTGYITEGQIYIDKQLHKRLIYPPIDVLPSLSRLMKSAVGEGMTREDHSDLSNQL 414
Query: 357 QKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQR-FLSQ 232
K +Q + A++G++ LS +D L + K ++ F++Q
Sbjct: 415 YACYAMGKDVQAMKAVVGVEALSPDDLLYLEFLAKFEKNFIAQ 457
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 64.9 bits (151), Expect = 5e-11
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 7/163 (4%)
Frame = -1
Query: 699 FTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTT--KKGSITSVQAIYVPADDLT 526
+ +A EVSA +P G+ + TD+ T+ ER + GSIT + + +P DD+T
Sbjct: 283 YAEALREVSAAREEVPGRRGFPGYMYTDLATIYERAGRVEGRDGSITQIPILTMPNDDIT 342
Query: 525 DPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIMDPNI----IGAEHYNVARGV 358
P P T + + R + IYP ++ L S SR+M I +H +V+ +
Sbjct: 343 HPIPDLTGYITEGQIYVDRQLHNRLIYPPINVLPSLSRLMKSAIGEGMTREDHSDVSNQL 402
Query: 357 QKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQR-FLSQ 232
K +Q + A++G + LS +D L + K ++ F++Q
Sbjct: 403 YACYAIGKDVQAMKAVVGEEALSSDDLLYLEFLTKFEKNFITQ 445
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 62.1 bits (144), Expect = 4e-10
Identities = 52/204 (25%), Positives = 95/204 (46%), Gaps = 14/204 (6%)
Frame = -1
Query: 699 FTQAGSEVSALLGRIPSAVGYQPTLATDMGTMQERITTTK-------KGSITSVQAIYVP 541
+ +A E+S LG +P+ GY LA + + ER K +GS+T V A+ P
Sbjct: 343 WAEALREISGRLGEMPADSGYPAYLAARLASFYERAGRVKCLGSPEREGSVTIVGAVSPP 402
Query: 540 ADDLTDPAPATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRIM-------DPNIIGAE 382
D DP + T + L + +A+ +P+++ L S S M + N E
Sbjct: 403 GGDFADPVTSATLGIVQVFWGLDKKLAQRKHFPSINWLISYSEYMRALEEFYEKNY--PE 460
Query: 381 HYNVARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRFLSQPFQVAEVFTG 202
++ ++ILQ+ + L +I+ ++G L+E DK+T+ ++ + + F +T
Sbjct: 461 FVSLRTKCKEILQEEEDLSEIVQLVGKASLAESDKVTL----EVAKIIKDDFLQQNGYTK 516
Query: 201 HAGKLVPLEETIKGFSKILAGDYD 130
+ + P +T+ G K + G YD
Sbjct: 517 Y-DRFCPFYKTV-GMLKNMIGFYD 538
>Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical
protein ZK896.7 protein.
Length = 380
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = -1
Query: 639 YQPTLATDMG--TMQERITTTKKGSITSVQ-AIYVPADDLTDPAPATTFAHLDATTV 478
Y PT T T+ TTT+ + T+V+ A +T P P TT + TTV
Sbjct: 146 YDPTATTSAAPTTIPPTTTTTRAPTTTTVRKTTQTTATTMTTPKPTTTVSTTTTTTV 202
>AF098994-4|AAO21390.1| 606|Caenorhabditis elegans Hypothetical
protein T06A4.1b protein.
Length = 606
Score = 29.5 bits (63), Expect = 2.4
Identities = 26/112 (23%), Positives = 45/112 (40%)
Frame = -1
Query: 621 TDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELGIYP 442
T+ T +E TTT + T+ P + T+P+P T A +TT + +E
Sbjct: 482 TEAPTTEEPTTTTTEEPTTTTTT-EEPTEAPTEPSPTTVEATEASTTPEASTSSETSTTE 540
Query: 441 AVDPLDSTSRIMDPNIIGAEHYNVARGVQKILQDYKSLQDIIAILGMDELSE 286
+P TS + P E + DY L ++ + D++S+
Sbjct: 541 NSEPNQKTSTPVAPEASTVEEETITPIKCVDYGDYCRLWGVLQLCYRDQVSK 592
>Z93391-7|CAB07685.3| 405|Caenorhabditis elegans Hypothetical
protein W04G5.9 protein.
Length = 405
Score = 29.1 bits (62), Expect = 3.2
Identities = 21/77 (27%), Positives = 32/77 (41%)
Frame = -1
Query: 630 TLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAELG 451
T+AT + TTTK + T++ + T P P TT + TT +R IA
Sbjct: 173 TVATTKTSPSTLRTTTKPPTTTTIATTRITTKTTTSPPPFTT--TVTTTTSAARTIATTT 230
Query: 450 IYPAVDPLDSTSRIMDP 400
V P+ + + P
Sbjct: 231 PIKTVPPVKVFGKAIKP 247
>U50197-2|AAA91255.2| 624|Caenorhabditis elegans Hypothetical
protein F25E2.2 protein.
Length = 624
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/60 (30%), Positives = 23/60 (38%)
Frame = -1
Query: 633 PTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFAHLDATTVLSRAIAEL 454
PT T T + TTT + + P T PAP TT TT+ + A L
Sbjct: 419 PTTTTTTTTTPKPTTTTTTTTTPAPTTTQKPTTTTTTPAPTTTSTTSIPTTIATTTAAPL 478
>U23513-1|ABD94110.1| 294|Caenorhabditis elegans Hypothetical
protein D2021.4a protein.
Length = 294
Score = 28.7 bits (61), Expect = 4.2
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = -1
Query: 417 SRIMDPNIIGAEHYN-VARGVQKILQDYKSLQDIIAILGMDELSEEDKLTVARARKIQRF 241
++I D N+I + HYN V+ G + L D K ++ + + D E K+ +A + +F
Sbjct: 56 NKIKDENVIFSMHYNFVSAGDPRKLIDIK-IEKVGNVYTADVYHENKKIGLAHIKTDSKF 114
Query: 240 LSQ-PF 226
L + PF
Sbjct: 115 LRKIPF 120
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 547 INSL-YRCDGTFLGGGNSFLHSTHVSSQSRLISYS 648
INSL + GTFLG G + HV S S ++S S
Sbjct: 426 INSLSFDMTGTFLGIGGQKVQVLHVKSWSEVVSLS 460
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/80 (27%), Positives = 39/80 (48%)
Frame = -1
Query: 678 VSALLGRIPSAVGYQPTLATDMGTMQERITTTKKGSITSVQAIYVPADDLTDPAPATTFA 499
VS+ ++P QPT+++++G + + T K+ +I V+ P+ P T
Sbjct: 1332 VSSFAPKVPETKINQPTISSNIGDLSK---TEKESTIPRVEV--TPS---ASPESTTVTE 1383
Query: 498 HLDATTVLSRAIAELGIYPA 439
H+DA T S I +G P+
Sbjct: 1384 HIDAET-NSATIPTIGTPPS 1402
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 27.5 bits (58), Expect = 9.8
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 355 ENSSGLQIPAGHYCYFG 305
ENS+G + AGH+C+ G
Sbjct: 424 ENSNGTECSAGHWCHIG 440
>Z50797-5|CAA90675.1| 342|Caenorhabditis elegans Hypothetical
protein T22H6.4 protein.
Length = 342
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -1
Query: 495 LDATTVLSRAIAELGIYPAVDPLDSTSRIMD 403
+D ++ A LGIYPA+DP+ + I D
Sbjct: 275 IDVGVAANKTAAFLGIYPALDPMIAIFLIKD 305
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 27.5 bits (58), Expect = 9.8
Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Frame = -1
Query: 681 EVSALLGRIPSAVGYQPTLATDMGTMQERITTTKK----GSITSVQAIYVPADDLTDPAP 514
++S LL R P Y + + ER GS+T++ I A D++ P
Sbjct: 281 QMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIP 340
Query: 513 ATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRI 409
+ D L + G+ PA++ S SR+
Sbjct: 341 TNVISITDGQIFLETELFYKGVRPAINVGLSVSRV 375
>AL023815-3|CAD92384.1| 503|Caenorhabditis elegans Hypothetical
protein H28O16.1c protein.
Length = 503
Score = 27.5 bits (58), Expect = 9.8
Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Frame = -1
Query: 681 EVSALLGRIPSAVGYQPTLATDMGTMQERITTTKK----GSITSVQAIYVPADDLTDPAP 514
++S LL R P Y + + ER GS+T++ I A D++ P
Sbjct: 273 QMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIP 332
Query: 513 ATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRI 409
+ D L + G+ PA++ S SR+
Sbjct: 333 TNVISITDGQIFLETELFYKGVRPAINVGLSVSRV 367
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 27.5 bits (58), Expect = 9.8
Identities = 23/95 (24%), Positives = 38/95 (40%), Gaps = 4/95 (4%)
Frame = -1
Query: 681 EVSALLGRIPSAVGYQPTLATDMGTMQERITTTKK----GSITSVQAIYVPADDLTDPAP 514
++S LL R P Y + + ER GS+T++ I A D++ P
Sbjct: 308 QMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNNSLGGGSLTALPVIETQAGDVSAYIP 367
Query: 513 ATTFAHLDATTVLSRAIAELGIYPAVDPLDSTSRI 409
+ D L + G+ PA++ S SR+
Sbjct: 368 TNVISITDGQIFLETELFYKGVRPAINVGLSVSRV 402
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,513,685
Number of Sequences: 27780
Number of extensions: 367987
Number of successful extensions: 1005
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 934
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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