Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11h20r
         (728 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4XRS9 Cluster: Putative uncharacterized protein; n=6; ...    39   0.11 
UniRef50_A0NE42 Cluster: ENSANGP00000030073; n=1; Anopheles gamb...    33   5.4  

>UniRef50_Q4XRS9 Cluster: Putative uncharacterized protein; n=6;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 1726

 Score = 39.1 bits (87), Expect = 0.11
 Identities = 22/66 (33%), Positives = 33/66 (50%)
 Frame = +2

Query: 437 NSSMQKCNNNVTLKVYLHTKYYCA*VIYLWCILFFVCLLNDINSRENHHN*RYLKVFYEL 616
           N+ +Q C NN   K+Y H KY     +Y +  LF       I   EN +  +YLK+F + 
Sbjct: 427 NTFLQICVNNYDDKIYKHMKYLYFSNLYFYNPLFIFQYFQFIPISENKYYEKYLKIFLKF 486

Query: 617 RHNKIM 634
            +N I+
Sbjct: 487 LNNIII 492


>UniRef50_A0NE42 Cluster: ENSANGP00000030073; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000030073 - Anopheles gambiae
           str. PEST
          Length = 68

 Score = 33.5 bits (73), Expect = 5.4
 Identities = 20/53 (37%), Positives = 30/53 (56%)
 Frame = +2

Query: 83  ACFINHKYLNCFQFLILKFYVFDIKTVQFCTGTYN*LFVIFFLLIHYNTFMDF 241
           A F+N+ YL+ F F+ L  + F+I  V F    +  LF+++F    YNTF  F
Sbjct: 18  AVFLNYVYLSFFYFVCL--FCFEICLVSFVLVLWLVLFLLYFFYF-YNTFALF 67


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 570,644,980
Number of Sequences: 1657284
Number of extensions: 10503902
Number of successful extensions: 22131
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22127
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)