BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV11h20f (598 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 25 0.43 DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 24 0.98 AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 1.7 DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein ... 23 3.0 AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 3.0 AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein ... 23 3.0 AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 22 5.3 DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 6.9 DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 21 9.2 >AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor protein. Length = 1370 Score = 25.4 bits (53), Expect = 0.43 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +2 Query: 467 TSSPLAARGAEIQSSIKPSSRLTLSGTAIAS 559 + + L GA++ + + +RLTLSG AIAS Sbjct: 391 SDNKLRTVGAQLFNGLFVLNRLTLSGNAIAS 421 >DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. Length = 495 Score = 24.2 bits (50), Expect = 0.98 Identities = 10/23 (43%), Positives = 16/23 (69%) Frame = +2 Query: 200 TLSATPAVSQSMEPSSTSTTTVS 268 +L T S + EPS+T++TT+S Sbjct: 377 SLVPTTTASPTTEPSTTTSTTIS 399 >AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. Length = 1598 Score = 23.4 bits (48), Expect = 1.7 Identities = 10/40 (25%), Positives = 19/40 (47%) Frame = +2 Query: 215 PAVSQSMEPSSTSTTTVSIACPASPNITARGAMDAATPSL 334 PA + + ++T+TTT + +PN T + P + Sbjct: 654 PATTITTITTTTTTTTTTTTTTTTPNTTQNASATTPPPQV 693 Score = 22.2 bits (45), Expect = 4.0 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = +2 Query: 194 PSTLSATPAVSQSMEPSSTSTTTV 265 P+T SA A S + +T TTT+ Sbjct: 238 PATPSAVVATSNATAAMTTGTTTI 261 Score = 21.0 bits (42), Expect = 9.2 Identities = 9/23 (39%), Positives = 13/23 (56%) Frame = +2 Query: 59 HESKKI*KQSPAQSCQQRLKPPP 127 H S+K +Q P Q QQ+ + P Sbjct: 1495 HSSQKTQQQQPQQQQQQQQQQQP 1517 >DQ855483-1|ABH88170.1| 117|Apis mellifera chemosensory protein 2 protein. Length = 117 Score = 22.6 bits (46), Expect = 3.0 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = +3 Query: 336 PCDPSSWRIVARSPLRLR 389 PCDP R+ + +PL LR Sbjct: 60 PCDPVGRRLKSLAPLVLR 77 >AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. Length = 1946 Score = 22.6 bits (46), Expect = 3.0 Identities = 10/16 (62%), Positives = 11/16 (68%) Frame = -2 Query: 480 SGELVCIAIGAIGTAS 433 +GE VC A A GTAS Sbjct: 653 AGEYVCTAENAAGTAS 668 >AJ973398-1|CAJ01445.1| 117|Apis mellifera hypothetical protein protein. Length = 117 Score = 22.6 bits (46), Expect = 3.0 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = +3 Query: 336 PCDPSSWRIVARSPLRLR 389 PCDP R+ + +PL LR Sbjct: 60 PCDPVGRRLKSLAPLVLR 77 >AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. Length = 615 Score = 21.8 bits (44), Expect = 5.3 Identities = 6/10 (60%), Positives = 9/10 (90%) Frame = +3 Query: 387 RWMQEGAWRW 416 RW+Q+GA+ W Sbjct: 171 RWVQQGAFGW 180 >DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex determiner protein. Length = 189 Score = 21.4 bits (43), Expect = 6.9 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = +3 Query: 48 TQHNTKVKKYKNNHRHNHVN 107 T HN KY N+++N+ N Sbjct: 89 TIHNNNNYKYNYNNKYNYNN 108 >DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein protein. Length = 486 Score = 21.0 bits (42), Expect = 9.2 Identities = 6/15 (40%), Positives = 9/15 (60%) Frame = -3 Query: 359 TPRAWITRSVMGSPH 315 TP W+ R+V+ H Sbjct: 179 TPHGWMRRNVLNKQH 193 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 170,331 Number of Sequences: 438 Number of extensions: 3505 Number of successful extensions: 13 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 13 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 17482179 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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