Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11h18r
(782 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 2e-09
SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 2e-05
SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29) 46 3e-05
SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15) 46 3e-05
SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16) 46 3e-05
SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18) 43 2e-04
SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17) 42 6e-04
SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15) 37 0.021
SB_725| Best HMM Match : Apolipoprotein (HMM E-Value=0.51) 32 0.46
SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09) 31 1.1
SB_44060| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 30 1.8
SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10) 30 1.8
SB_25563| Best HMM Match : HEAT (HMM E-Value=2.5e-20) 29 3.2
SB_51467| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14) 29 5.6
SB_15991| Best HMM Match : SCP (HMM E-Value=2.3e-23) 29 5.6
SB_43298| Best HMM Match : WD40 (HMM E-Value=1.7e-30) 29 5.6
SB_13112| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_27164| Best HMM Match : CBM_14 (HMM E-Value=1.1e-05) 28 7.4
SB_9147| Best HMM Match : Sushi (HMM E-Value=0) 28 7.4
>SB_12083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1671
Score = 51.6 bits (118), Expect = 7e-07
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = -1
Query: 359 NCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNVDCGSR 234
NC+ F +C N + CP NL Y+P+K C+W VDCG R
Sbjct: 531 NCNGFVMCSNGYIYYMDCPSNLRYDPAKGRCEWADTVDCGQR 572
Score = 50.4 bits (115), Expect = 2e-06
Identities = 24/59 (40%), Positives = 30/59 (50%)
Frame = -1
Query: 695 CAENDSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNVECGDRTIP 519
CAE SDG + C F C N + CP NL +NP+ + CD P NV+CG P
Sbjct: 443 CAER-SDGDYQDPDACEGFISCSNHITYHMPCPENLRFNPTTKHCDNPENVQCGPTRPP 500
Score = 49.2 bits (112), Expect(2) = 2e-09
Identities = 22/54 (40%), Positives = 30/54 (55%)
Frame = -1
Query: 401 CAQTGSDSVLIAHENCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNVDCG 240
CA+ SD + C+ F C NH + CP NL +NP+ + CD P+NV CG
Sbjct: 443 CAER-SDGDYQDPDACEGFISCSNHITYHMPCPENLRFNPTTKHCDNPENVQCG 495
Score = 44.8 bits (101), Expect = 8e-05
Identities = 21/51 (41%), Positives = 27/51 (52%)
Frame = -1
Query: 359 NCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNVDCGSRIIP*THTYI 207
NC+ F C N CP NL ++ K EC+WP V+C SR P T Y+
Sbjct: 610 NCNGFITCSNGYAYKRDCPFNLKFDTKKLECEWPNKVNCKSR--PTTVPYV 658
Score = 44.4 bits (100), Expect = 1e-04
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -1
Query: 653 HCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNVECGDR 528
+C F C N + CP NL Y+P+ +C+W V+CG R
Sbjct: 531 NCNGFVMCSNGYIYYMDCPSNLRYDPAKGRCEWADTVDCGQR 572
Score = 43.6 bits (98), Expect = 2e-04
Identities = 35/149 (23%), Positives = 50/149 (33%)
Frame = -1
Query: 689 ENDSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNVECGDRTIPENV 510
E +G +C F C N CP NL ++ +C+WP+ V C R P V
Sbjct: 598 EEKKNGDYADPSNCNGFITCSNGYAYKRDCPFNLKFDTKKLECEWPNKVNCKSR--PTTV 655
Query: 509 EDEDNDNAXXXXXXXXXXXXXXXXXXNCDPSAAPTLCAQTGSDSVLIAHENCDKFYICWN 330
PS C + G+ H NC + +C
Sbjct: 656 P---------------------YVTKPTPPSGNSEFCKKNGNGRYRDPH-NCLGYIVCRG 693
Query: 329 HKPVVLSCPPNLLYNPSKEECDWPQNVDC 243
+C L +N + CD P+NV C
Sbjct: 694 GNIYFRNCRRGLRFNGVTKRCDLPRNVKC 722
Score = 35.1 bits (77), Expect(2) = 4e-06
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = -1
Query: 716 PSLATEICAENDSDGVLVAHEHCTRFYKCFNSRPVA-LICPPNLLYNPSNEQCDWPHNV 543
P + + C E DG +C + C N +A CP L +N + CD+P NV
Sbjct: 309 PLVDSNFCTERQ-DGNYADSSNCNLYITCSNGFTIANRHCPTGLAFNEAIGMCDYPSNV 366
Score = 33.5 bits (73), Expect(2) = 4e-06
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = -1
Query: 428 CDPSAAPTLCAQTGSDSVLIAHENCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNV 249
C S+ C + SD NC F +C N ++CP ++P+K+ C ++
Sbjct: 369 CSGSSGSGFCHEK-SDGNYKDSGNCHGFIMCSNGHTYHMTCPGQTNFDPAKKRC---EDY 424
Query: 248 DCGSR 234
DC R
Sbjct: 425 DCSGR 429
Score = 33.1 bits (72), Expect = 0.26
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Frame = -1
Query: 716 PSLATEICAENDSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNVEC 537
PS +E C +N + H +C + C C L +N ++CD P NV+C
Sbjct: 664 PSGNSEFCKKNGNGRYRDPH-NCLGYIVCRGGNIYFRNCRRGLRFNGVTKRCDLPRNVKC 722
Query: 536 ---GDRTIPENVEDED 498
G T E +D D
Sbjct: 723 AGAGGGTFCEGRKDGD 738
Score = 32.3 bits (70), Expect = 0.46
Identities = 17/66 (25%), Positives = 28/66 (42%)
Frame = -1
Query: 428 CDPSAAPTLCAQTGSDSVLIAHENCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNV 249
C + T C + D + NC+ F C N CP NL +N K+ ++ +
Sbjct: 722 CAGAGGGTFC-EGRKDGDYVDAVNCNGFIKCSNQLTYYFDCPSNLRFNIKKDWAEYNKTG 780
Query: 248 DCGSRI 231
+ G R+
Sbjct: 781 ERGYRL 786
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = -1
Query: 689 ENDSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNVECGDR 528
E DG V +C F KC N CP NL +N DW + G+R
Sbjct: 732 EGRKDGDYVDAVNCNGFIKCSNQLTYYFDCPSNLRFNIKK---DWAEYNKTGER 782
Score = 30.7 bits (66), Expect(2) = 2e-09
Identities = 17/72 (23%), Positives = 30/72 (41%)
Frame = -1
Query: 713 SLATEICAENDSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNVECG 534
S + C E SDG +C F C N + CP ++P+ ++C+ + +C
Sbjct: 372 SSGSGFCHEK-SDGNYKDSGNCHGFIMCSNGHTYHMTCPGQTNFDPAKKRCE---DYDCS 427
Query: 533 DRTIPENVEDED 498
R + + D
Sbjct: 428 GRDVAYLTDQND 439
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = -1
Query: 359 NCDKFYICWNHKPVV-LSCPPNLLYNPSKEECDWPQNV 249
NC+ + C N + CP L +N + CD+P NV
Sbjct: 329 NCNLYITCSNGFTIANRHCPTGLAFNEAIGMCDYPSNV 366
>SB_58974| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1831
Score = 57.2 bits (132), Expect = 1e-08
Identities = 39/162 (24%), Positives = 59/162 (36%), Gaps = 8/162 (4%)
Frame = -1
Query: 704 TEICAENDSDGVLVAHEHCTRFYKCFNSRPVALI-CPPNLLYNPSNEQCDWPHNVECGDR 528
T C + + G C+RFY+C L C P L ++ + CDWP NV+C +
Sbjct: 780 TTFCKDKPN-GYYADPRDCSRFYQCDAFHRAFLHRCSPGLKWSITKTTCDWPRNVDCDRK 838
Query: 527 T------IPENVEDEDNDNAXXXXXXXXXXXXXXXXXXNCDPSAAPTLCAQTGSDSVLIA 366
T P + + + T + +
Sbjct: 839 TPTPPSPTPPTTTPKPACDLHCQTLNPDGSCTVAPGYEVVNGMCVDTTFCKDKPNGHYAD 898
Query: 365 HENCDKFYIC-WNHKPVVLSCPPNLLYNPSKEECDWPQNVDC 243
+C KFY C H+ + CP L ++ K CDWP+ VDC
Sbjct: 899 PRDCSKFYQCDAFHRAFLHRCPAGLKWSVKKTACDWPRYVDC 940
Score = 56.8 bits (131), Expect = 2e-08
Identities = 36/140 (25%), Positives = 53/140 (37%), Gaps = 4/140 (2%)
Frame = -1
Query: 650 CTRFYKCFNSRPVALI-CPPNLLYNPSNEQCDWPHNVECGDRTI--PENVEDEDNDNAXX 480
C+RFY+C L CP L ++ CDWP V+C DRT P + +
Sbjct: 1152 CSRFYQCDAFHKTFLHRCPAGLKWSVKKTACDWPRYVDC-DRTTSTPPTPTTKPECDLHC 1210
Query: 479 XXXXXXXXXXXXXXXXNCDPSAAPTLCAQTGSDSVLIAHENCDKFYICWN-HKPVVLSCP 303
+ T + + +C +FY C H+ + CP
Sbjct: 1211 QTLSPDGSCTVAPGYAVVNGMCVDTYFCKEKPNGHYADPRDCSRFYQCDAFHRAFLHRCP 1270
Query: 302 PNLLYNPSKEECDWPQNVDC 243
L ++ K CDWP+ VDC
Sbjct: 1271 AGLKWSVKKTACDWPRYVDC 1290
Score = 48.8 bits (111), Expect = 5e-06
Identities = 36/145 (24%), Positives = 53/145 (36%), Gaps = 9/145 (6%)
Frame = -1
Query: 650 CTRFYKCFNSRPVALI-CPPNLLYNPSNEQCDWPHNVECGDRTIPENVEDEDNDNAXXXX 474
C++FY+C L CP L ++ CDWP V+C DRT +
Sbjct: 902 CSKFYQCDAFHRAFLHRCPAGLKWSVKKTACDWPRYVDC-DRTTSTPPTPTTHTPTIKPA 960
Query: 473 XXXXXXXXXXXXXXNCDPS--AAPTLCAQTG-----SDSVLIAHENCDKFYICWN-HKPV 318
P+ +C T + +C +FY C H+
Sbjct: 961 CDLHCQTLNLDGTCTVMPNYQVVNGMCVDTTFCKDKPNGHYADPMDCSRFYQCDAFHRAF 1020
Query: 317 VLSCPPNLLYNPSKEECDWPQNVDC 243
+ CP L ++ K CDWP+ VDC
Sbjct: 1021 LHRCPAGLKWSVKKTTCDWPRYVDC 1045
Score = 47.2 bits (107), Expect = 1e-05
Identities = 41/168 (24%), Positives = 57/168 (33%), Gaps = 8/168 (4%)
Frame = -1
Query: 704 TEICAENDSDGVLVAHEHCTRFYKCFNSRPVALI-CPPNLLYNPSNEQCDWPHNVECGDR 528
T C E + G C+RFY+C L CP L ++ CDWP V+C
Sbjct: 1235 TYFCKEKPN-GHYADPRDCSRFYQCDAFHRAFLHRCPAGLKWSVKKTACDWPRYVDCDRT 1293
Query: 527 T------IPENVEDEDNDNAXXXXXXXXXXXXXXXXXXNCDPSAAPTLCAQTGSDSVLIA 366
T P + + + T +
Sbjct: 1294 TSTPPTPTPLTPTTKPACDLHCQTLNPDGSCTVAPGYEVVNGMCVDTTFCKDRPHGHYAD 1353
Query: 365 HENCDKFYIC-WNHKPVVLSCPPNLLYNPSKEECDWPQNVDCGSRIIP 225
+C +FY C +HK + CP L ++ K CD P VDC R IP
Sbjct: 1354 PRDCSRFYQCDASHKTFLHRCPDGLKWSVKKTACDLPLYVDC-DRTIP 1400
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1
Query: 362 ENCDKFYICWNHKPVVLS-CPPNLLYNPSKEECDWPQNVDCGSRIIP 225
++C +FY C+ +LS CP LL++ K+ CD+P VDC P
Sbjct: 580 KDCAQFYFCYGSAESLLSRCPRGLLWSVVKKTCDYPHLVDCSRPTTP 626
Score = 41.9 bits (94), Expect = 6e-04
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = -1
Query: 650 CTRFYKCFNSRPVALI-CPPNLLYNPSNEQCDWPHNVECGDRTIP 519
C +FY C+ S L CP LL++ + CD+PH V+C T P
Sbjct: 582 CAQFYFCYGSAESLLSRCPRGLLWSVVKKTCDYPHLVDCSRPTTP 626
Score = 41.9 bits (94), Expect = 6e-04
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -1
Query: 359 NCDKFYICWN-HKPVVLSCPPNLLYNPSKEECDWPQNVDC 243
+C +FY C HK + CP L ++ K CDWP+ VDC
Sbjct: 1151 DCSRFYQCDAFHKTFLHRCPAGLKWSVKKTACDWPRYVDC 1190
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -1
Query: 359 NCDKFYIC-WNHKPVVLSCPPNLLYNPSKEECDWPQNVDC 243
NC + Y C H+ + SCP L +N K CD P NV+C
Sbjct: 1467 NCSRLYQCDIFHRAFLKSCPHGLKWNIEKNACDHPVNVNC 1506
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 650 CTRFYKCFNSRPVALI-CPPNLLYNPSNEQCDWPHNVECGDRT 525
C+RFY+C L CP L ++ CDWP V+C DRT
Sbjct: 1007 CSRFYQCDAFHRAFLHRCPAGLKWSVKKTTCDWPRYVDC-DRT 1048
Score = 34.7 bits (76), Expect = 0.085
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Frame = -1
Query: 704 TEICAENDSDGVLVAHEHCTRFYKC-FNSRPVALICPPNLLYNPSNEQCDWPHNVEC 537
T C + SD +C+R Y+C R CP L +N CD P NV C
Sbjct: 1451 TSFCKDKTSD-YYHDPRNCSRLYQCDIFHRAFLKSCPHGLKWNIEKNACDHPVNVNC 1506
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = -1
Query: 359 NCDKFYICWNHKPVVL-SCPPNLLYNPSKEECDWPQNVDCGSRIIP*T 219
+C K+Y C + V SCP L+N ++CD V C P T
Sbjct: 80 DCFKYYHCDGYDDVRWRSCPTGQLWNHVNKKCDRADLVICDRDATPGT 127
>SB_13694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 767
Score = 49.2 bits (112), Expect = 4e-06
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = -1
Query: 365 HENCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNVDC 243
++ C F C N+ CP LLYN ++CDWP+NVDC
Sbjct: 88 YDACRGFIHCHNYNASYKPCPGGLLYNEKTKQCDWPRNVDC 128
Score = 47.6 bits (108), Expect = 1e-05
Identities = 18/41 (43%), Positives = 22/41 (53%)
Frame = -1
Query: 659 HEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNVEC 537
++ C F C N CP LLYN +QCDWP NV+C
Sbjct: 88 YDACRGFIHCHNYNASYKPCPGGLLYNEKTKQCDWPRNVDC 128
>SB_23047| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1601
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/76 (30%), Positives = 34/76 (44%)
Frame = -1
Query: 728 GHADPSLATEICAENDSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPH 549
G A P+ + CA +DG + C+ +Y+C R CP L +N + CD P
Sbjct: 217 GKATPAEDEKFCA-GKTDGTYADPKDCSAYYQCKKGRSFKKFCPDGLKFNALIKSCDEPS 275
Query: 548 NVECGDRTIPENVEDE 501
V C + E E+E
Sbjct: 276 KVNCVTKQRDEEEEEE 291
Score = 33.1 bits (72), Expect = 0.26
Identities = 16/60 (26%), Positives = 25/60 (41%)
Frame = -1
Query: 422 PSAAPTLCAQTGSDSVLIAHENCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNVDC 243
P+ CA +D ++C +Y C + CP L +N + CD P V+C
Sbjct: 221 PAEDEKFCAGK-TDGTYADPKDCSAYYQCKKGRSFKKFCPDGLKFNALIKSCDEPSKVNC 279
>SB_27121| Best HMM Match : CBM_14 (HMM E-Value=5.8e-29)
Length = 339
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -1
Query: 359 NCDKFYICWN-HKPVVLSCPPNLLYNPSKEECDWPQNVDC 243
NC +FY C HK + SCP L ++ +K CDWP+ VDC
Sbjct: 128 NCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYVDC 167
Score = 37.5 bits (83), Expect = 0.012
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -1
Query: 653 HCTRFYKCFNSRPVAL-ICPPNLLYNPSNEQCDWPHNVEC 537
+C+RFY+C L CP L ++ + CDWP V+C
Sbjct: 128 NCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYVDC 167
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 362 ENCDKFYICWN-HKPVVLSCPPNLLYNPSKEECDWPQNVDC 243
++C K+Y C + HK +C L ++ K CD +VDC
Sbjct: 34 KDCSKYYQCDDFHKTHHRTCSEQLKWSAVKNICDHAADVDC 74
>SB_27119| Best HMM Match : CBM_14 (HMM E-Value=4.1e-15)
Length = 220
Score = 46.4 bits (105), Expect = 3e-05
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = -1
Query: 359 NCDKFYICWN-HKPVVLSCPPNLLYNPSKEECDWPQNVDC 243
NC +FY C HK + SCP L ++ +K CDWP+ VDC
Sbjct: 35 NCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYVDC 74
Score = 37.5 bits (83), Expect = 0.012
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -1
Query: 653 HCTRFYKCFNSRPVAL-ICPPNLLYNPSNEQCDWPHNVEC 537
+C+RFY+C L CP L ++ + CDWP V+C
Sbjct: 35 NCSRFYQCDAFHKAFLHSCPSGLKWSVTKTTCDWPRYVDC 74
>SB_43832| Best HMM Match : CBM_14 (HMM E-Value=2.8e-16)
Length = 518
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -1
Query: 689 ENDSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNVEC 537
E + DG+ E+C F C CPP L++N CDW H V+C
Sbjct: 459 ERNGDGIYAEKENCYGFVLCGGGIAHKKTCPPGLIFNTDLMVCDWSHEVKC 509
Score = 42.3 bits (95), Expect = 4e-04
Identities = 24/97 (24%), Positives = 32/97 (32%)
Frame = -1
Query: 533 DRTIPENVEDEDNDNAXXXXXXXXXXXXXXXXXXNCDPSAAPTLCAQTGSDSVLIAHENC 354
DRT P N D + + C + G D + ENC
Sbjct: 414 DRTSPNNTSSSAPDKSPILTDMKDFAQTFPTEGTPKYSNKDGMFCERNG-DGIYAEKENC 472
Query: 353 DKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNVDC 243
F +C +CPP L++N CDW V C
Sbjct: 473 YGFVLCGGGIAHKKTCPPGLIFNTDLMVCDWSHEVKC 509
>SB_1784| Best HMM Match : CBM_14 (HMM E-Value=7e-18)
Length = 123
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 368 AH-ENCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNVDC 243
AH ENC + C N CP L +N +K+ CDWP+N C
Sbjct: 71 AHPENCKMYITCSNKITYERQCPAGLNWNDAKKWCDWPKNAPC 113
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -1
Query: 662 AH-EHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNVECGDR 528
AH E+C + C N CP L +N + + CDWP N C ++
Sbjct: 71 AHPENCKMYITCSNKITYERQCPAGLNWNDAKKWCDWPKNAPCEEK 116
>SB_58073| Best HMM Match : CBM_14 (HMM E-Value=1.4e-17)
Length = 225
Score = 41.9 bits (94), Expect = 6e-04
Identities = 18/54 (33%), Positives = 25/54 (46%)
Frame = -1
Query: 698 ICAENDSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNVEC 537
IC +N +DG + C + C N + CP L +N + CDWP N C
Sbjct: 85 IC-KNRADGNYPHPDFCKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWPFNAPC 137
Score = 37.5 bits (83), Expect = 0.012
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = -1
Query: 356 CDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNVDC 243
C + C N + CP L +N K+ CDWP N C
Sbjct: 100 CKMYIACSNGIAYEMPCPAGLNWNDEKKYCDWPFNAPC 137
>SB_10326| Best HMM Match : CBM_14 (HMM E-Value=5.3e-15)
Length = 134
Score = 36.7 bits (81), Expect = 0.021
Identities = 19/71 (26%), Positives = 28/71 (39%)
Frame = -1
Query: 404 LCAQTGSDSVLIAHENCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNVDCGSRIIP 225
LCA + L +C +Y C K V C P +++P C+W C P
Sbjct: 21 LCADKPHGAYLPDSTSCQHYYHCTWGKAVRKDCGPGRVWDPRITNCNWDWAYKCVGTPAP 80
Query: 224 *THTYILFSRN 192
TY+ + N
Sbjct: 81 SVDTYMTSTNN 91
Score = 35.5 bits (78), Expect = 0.049
Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Frame = -1
Query: 713 SLATEICAENDSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNVECG 534
S+ ++CA+ L C +Y C + V C P +++P C+W +C
Sbjct: 16 SVHADLCADKPHGAYLPDSTSCQHYYHCTWGKAVRKDCGPGRVWDPRITNCNWDWAYKCV 75
Query: 533 DRTIPE---NVEDEDNDN 489
P + +NDN
Sbjct: 76 GTPAPSVDTYMTSTNNDN 93
>SB_725| Best HMM Match : Apolipoprotein (HMM E-Value=0.51)
Length = 567
Score = 32.3 bits (70), Expect = 0.46
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = -1
Query: 719 DPSLATEICAENDSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQC 561
D L + + +SD E T +KCF S+P ++C L P E C
Sbjct: 252 DDGLVAIVVKKKESDVRQQQQEFVTALHKCFGSKPTVMVCVDGL--KPLPEDC 302
>SB_2441| Best HMM Match : CBM_14 (HMM E-Value=2.1e-09)
Length = 98
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -1
Query: 386 SDSVLIAHENCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWP 258
+ V +N KF IC+N C L++NP ++ C+ P
Sbjct: 11 TSGVYADEKNPSKFVICYNGVREERECAKGLVFNPKEKICEQP 53
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = -1
Query: 710 LATEICAENDSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWP 552
L++ C S GV ++ ++F C+N C L++NP + C+ P
Sbjct: 2 LSSNFCKVKTS-GVYADEKNPSKFVICYNGVREERECAKGLVFNPKEKICEQP 53
>SB_44060| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 64
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 362 ENCDKFYICWN-HKPVVLSCPPNLLYNPSKEECDWPQNVDC 243
++C K+Y C + HK +C L ++ K CD +VDC
Sbjct: 16 KDCSKYYQCDDFHKTHHRTCSDQLKWSAVKNICDHAADVDC 56
>SB_38764| Best HMM Match : CBM_14 (HMM E-Value=1.5e-10)
Length = 155
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 362 ENCDKFYICWN-HKPVVLSCPPNLLYNPSKEECDWPQNVDC 243
++C K+Y C + HK +C L ++ K CD +VDC
Sbjct: 83 KDCSKYYQCDDFHKTHHRTCSDQLKWSAVKNICDHAADVDC 123
>SB_25563| Best HMM Match : HEAT (HMM E-Value=2.5e-20)
Length = 1803
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -1
Query: 362 ENCDKFYICWNHKPVVL-SCPPNLLYNPSKEECDWPQNVDCGSR 234
++C K+Y C + L SCP L+N ++CD V C R
Sbjct: 1503 KDCSKYYHCDGYDDGRLRSCPTGQLWNHVNKKCDRADLVICDPR 1546
Score = 28.7 bits (61), Expect = 5.6
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Frame = -1
Query: 650 CTRFYKCFNSRPVAL-ICPPNLLYNPSNEQCDWPHNVECGDR--TIPENVEDEDNDN 489
C+++Y C L CP L+N N++CD V C R + P+N DN
Sbjct: 1505 CSKYYHCDGYDDGRLRSCPTGQLWNHVNKKCDRADLVICDPRCYSCPDNKIYNSLDN 1561
>SB_51467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 465
Score = 29.5 bits (63), Expect = 3.2
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +2
Query: 635 CKIWCSAHGRPKHRLNHFQHKFQ*P 709
C +WCS G P H + + K+ P
Sbjct: 226 CDVWCSIDGNPYHEIVKYMEKYTLP 250
>SB_58074| Best HMM Match : CBM_14 (HMM E-Value=2.7e-14)
Length = 480
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/64 (23%), Positives = 25/64 (39%)
Frame = -1
Query: 749 TKRYHXNGHADPSLATEICAENDSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSN 570
T R H + + C ++ +DG C + C N + CP L +N
Sbjct: 318 TTRNHPRQFTVSTSVSNFC-QDKADGNYAHPSKCDMYITCSNGIAHEMPCPAGLNWNDVT 376
Query: 569 EQCD 558
++CD
Sbjct: 377 KECD 380
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -1
Query: 368 AHEN-CDKFYICWNHKPVVLSCPPNLLYNPSKEECD 264
AH + CD + C N + CP L +N +ECD
Sbjct: 345 AHPSKCDMYITCSNGIAHEMPCPAGLNWNDVTKECD 380
>SB_15991| Best HMM Match : SCP (HMM E-Value=2.3e-23)
Length = 1189
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/41 (36%), Positives = 18/41 (43%)
Frame = -1
Query: 422 PSAAPTLCAQTGSDSVLIAHENCDKFYICWNHKPVVLSCPP 300
P +APTLC TG H +C F+ H P PP
Sbjct: 843 PCSAPTLCYHTG------CHVDCCAFHPTHPHHPTTTLAPP 877
>SB_43298| Best HMM Match : WD40 (HMM E-Value=1.7e-30)
Length = 685
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Frame = -1
Query: 578 PSNEQCDWPHN----VECGDRTIPENVEDEDND 492
PSN CDW H+ G+ I + E+ED D
Sbjct: 91 PSNADCDWSHHQMMQANQGETAIEGSSEEEDED 123
>SB_13112| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +3
Query: 519 WNGSVSTLYIMRPVTLLVTRII 584
WN V T Y+ R VTL VTR +
Sbjct: 22 WNNDVVTRYVTRYVTLYVTRYV 43
>SB_27164| Best HMM Match : CBM_14 (HMM E-Value=1.1e-05)
Length = 85
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/40 (35%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -1
Query: 359 NCDKFYICWN-HKPVVLSCPPNLLYNPSKEECDWPQNVDC 243
+C KFY C H+ C ++ K CD +NVDC
Sbjct: 42 DCAKFYQCDGFHRTFHRMCSDVPKWSVMKSTCDHAKNVDC 81
>SB_9147| Best HMM Match : Sushi (HMM E-Value=0)
Length = 1656
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = -1
Query: 428 CDPSAAPTLCAQTGSDSVLIAHE--NCDK-FYI 339
C P AAPT + TG +V H NCDK FY+
Sbjct: 1009 CGPLAAPTNGSMTGQRTVFPNHVTFNCDKGFYL 1041
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,757,789
Number of Sequences: 59808
Number of extensions: 483739
Number of successful extensions: 1037
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 917
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2143884611
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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