Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11h18r
(782 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 59 3e-09
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 46 4e-05
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 46 4e-05
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 45 5e-05
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 45 7e-05
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 33 0.17
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 32 0.40
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 32 0.40
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 32 0.40
AF024503-12|AAG24092.2| 329|Caenorhabditis elegans Serpentine r... 30 1.6
Z82278-10|CAC15860.2| 390|Caenorhabditis elegans Hypothetical p... 30 2.1
AL132943-14|CAC14395.2| 390|Caenorhabditis elegans Hypothetical... 30 2.1
U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical pr... 28 8.7
U29612-3|AAA68802.2| 289|Caenorhabditis elegans Hypothetical pr... 28 8.7
DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated... 28 8.7
AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical... 28 8.7
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 59.3 bits (137), Expect = 3e-09
Identities = 39/153 (25%), Positives = 65/153 (42%), Gaps = 1/153 (0%)
Frame = -1
Query: 686 NDSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV-ECGDRTIPENV 510
N DG+ RF C + + CP +L+Y+ + E CDW HNV ECG+ E
Sbjct: 27 NVGDGMYPLGACEPRFLACVSGEARYMDCPEDLVYHKNLEFCDWRHNVFECGE----EGE 82
Query: 509 EDEDNDNAXXXXXXXXXXXXXXXXXXNCDPSAAPTLCAQTGSDSVLIAHENCDKFYICWN 330
E+E + + + +C ++ D V + + IC +
Sbjct: 83 ENEFSGDGSGESSGDEEITFGDSSGESSGDELLENVC-ESLKDGVYSSGTCSSSYIICNS 141
Query: 329 HKPVVLSCPPNLLYNPSKEECDWPQNVDCGSRI 231
P LSC L+Y+P+ ++C W +D S++
Sbjct: 142 GSPRFLSCSTPLIYDPTNKKCSWKGMIDECSQV 174
Score = 46.4 bits (105), Expect = 2e-05
Identities = 42/197 (21%), Positives = 73/197 (37%), Gaps = 21/197 (10%)
Frame = -1
Query: 773 GQCNGGTETKRYHXNGHADPSLATEICAENDSDGVLVAHEHCTRFYKCFNSRPVALICPP 594
G+ +G E +G + E E+ DGV + + + C + P L C
Sbjct: 92 GESSGDEEITFGDSSGESSGDELLENVCESLKDGVYSSGTCSSSYIICNSGSPRFLSCST 151
Query: 593 NLLYNPSNEQCDWPHNVECGDRTIPENVEDEDNDNAXXXXXXXXXXXXXXXXXXNCDPSA 414
L+Y+P+N++C W ++ + E E + N + NC +
Sbjct: 152 PLIYDPTNKKCSWKGMIDECSQVSGEYCESDGNISKSECSNVFFSCSEGIAHRRNCPANL 211
Query: 413 A--PTLCAQTGSDSVLIAHE------NC-------------DKFYICWNHKPVVLSCPPN 297
P + + +V+ E NC F C N P+V+ CP
Sbjct: 212 VFNPAISSCDWPKNVMDCSEKSEKPQNCGEVDGYFSFGRCSSSFSACTNGIPIVMFCPDG 271
Query: 296 LLYNPSKEECDWPQNVD 246
L+++ + CD+ NVD
Sbjct: 272 LMFSEKNQMCDYEWNVD 288
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = -1
Query: 386 SDSVLIAHENCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNV-DCGSR 234
SD + E + F+ C +CP NL++NP+ CDWP+NV DC +
Sbjct: 181 SDGNISKSECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDCSEK 232
Score = 38.3 bits (85), Expect(2) = 6e-08
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = -1
Query: 677 DGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV-EC 537
DG + F C N P+ + CP L+++ N+ CD+ NV EC
Sbjct: 243 DGYFSFGRCSSSFSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDEC 290
Score = 36.3 bits (80), Expect(2) = 6e-08
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = -1
Query: 416 AAPTLCAQTGSDSVLIAHENCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQ 255
A+ L T D+ L A + + C N + + CPP+L++N + CD+P+
Sbjct: 303 ASEALTPCTNMDNGLYALDCTPRVLSCQNGRENIFECPPSLVFNENSLICDYPE 356
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = -1
Query: 677 DGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPH-NVEC 537
D L A + R C N R CPP+L++N ++ CD+P +++C
Sbjct: 314 DNGLYALDCTPRVLSCQNGRENIFECPPSLVFNENSLICDYPETSLKC 361
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 45.6 bits (103), Expect = 4e-05
Identities = 33/144 (22%), Positives = 54/144 (37%), Gaps = 1/144 (0%)
Frame = -1
Query: 683 DSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV-ECGDRTIPENVE 507
+ DG + + F C N R + + CP L ++ S +CD+ NV EC + + E+ E
Sbjct: 310 EEDGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSECQETSGEESGE 369
Query: 506 DEDNDNAXXXXXXXXXXXXXXXXXXNCDPSAAPTLCAQTGSDSVLIAHENCDKFYICWNH 327
+ + S G D+ L A + C N
Sbjct: 370 ASGEQSGEGSGEASGEASGESSG----EGSGVEEQNQCVGLDNGLHAIGCSPRVLSCQNG 425
Query: 326 KPVVLSCPPNLLYNPSKEECDWPQ 255
+ CP +L++N CD+PQ
Sbjct: 426 HVDIFECPSSLVFNDQSLICDYPQ 449
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = -1
Query: 701 EICAENDSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV-ECGDRT 525
E E +DG+ T F C + CP +L++NP+ CDWP +V EC
Sbjct: 244 EPTCEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECAGLP 303
Query: 524 IPENVEDED 498
P+ +ED
Sbjct: 304 TPQPTCEED 312
Score = 39.5 bits (88), Expect = 0.003
Identities = 38/170 (22%), Positives = 63/170 (37%), Gaps = 12/170 (7%)
Frame = -1
Query: 698 ICAENDSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNVE-CG-DRT 525
+C EN DG + T ++ C + L CP L Y+ +++C W VE C D T
Sbjct: 137 VC-ENLEDGAYSSGGCTTYYFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVEECKEDLT 195
Query: 524 IPENVEDEDNDNAXXXXXXXXXXXXXXXXXXNCDPSAAPTLCAQTGSDSVLIA------H 363
I + + + + + + +G H
Sbjct: 196 ITDGSGETSGEGSGEASGEASGEGSGEASGESSGQGSGEASGEGSGELEPTCEGKADGIH 255
Query: 362 EN--CD-KFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNV-DCGSRIIP 225
N C F C ++ CP +L++NP+ CDWP++V +C P
Sbjct: 256 PNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECAGLPTP 305
Score = 35.1 bits (77), Expect = 0.057
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -1
Query: 686 NDSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV 543
N DG+ E +F C + CP +L+YN CDW HNV
Sbjct: 26 NALDGLYALGECEPQFLTCSGGIARIMDCPADLIYNEPLLICDWRHNV 73
Score = 32.3 bits (70), Expect = 0.40
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -1
Query: 422 PSAAPTLCAQTGSDSVLIAHENCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNV 249
P+ PT C + G S + F C N + +V+ CP L ++ S CD+ NV
Sbjct: 303 PTPQPT-CEEDGYFSF---GQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNV 356
Score = 31.5 bits (68), Expect = 0.70
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -1
Query: 374 LIAHENCD-KFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNV 249
L A C+ +F C ++ CP +L+YN CDW NV
Sbjct: 31 LYALGECEPQFLTCSGGIARIMDCPADLIYNEPLLICDWRHNV 73
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 45.6 bits (103), Expect = 4e-05
Identities = 33/144 (22%), Positives = 54/144 (37%), Gaps = 1/144 (0%)
Frame = -1
Query: 683 DSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV-ECGDRTIPENVE 507
+ DG + + F C N R + + CP L ++ S +CD+ NV EC + + E+ E
Sbjct: 310 EEDGYFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSECQETSGEESGE 369
Query: 506 DEDNDNAXXXXXXXXXXXXXXXXXXNCDPSAAPTLCAQTGSDSVLIAHENCDKFYICWNH 327
+ + S G D+ L A + C N
Sbjct: 370 ASGEQSGEGSGEASGEASGESSG----EGSGVEEQNQCVGLDNGLHAIGCSPRVLSCQNG 425
Query: 326 KPVVLSCPPNLLYNPSKEECDWPQ 255
+ CP +L++N CD+PQ
Sbjct: 426 HVDIFECPSSLVFNDQSLICDYPQ 449
Score = 42.3 bits (95), Expect = 4e-04
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = -1
Query: 701 EICAENDSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV-ECGDRT 525
E E +DG+ T F C + CP +L++NP+ CDWP +V EC
Sbjct: 244 EPTCEGKADGIHPNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECAGLP 303
Query: 524 IPENVEDED 498
P+ +ED
Sbjct: 304 TPQPTCEED 312
Score = 39.5 bits (88), Expect = 0.003
Identities = 38/170 (22%), Positives = 63/170 (37%), Gaps = 12/170 (7%)
Frame = -1
Query: 698 ICAENDSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNVE-CG-DRT 525
+C EN DG + T ++ C + L CP L Y+ +++C W VE C D T
Sbjct: 137 VC-ENLEDGAYSSGGCTTYYFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVEECKEDLT 195
Query: 524 IPENVEDEDNDNAXXXXXXXXXXXXXXXXXXNCDPSAAPTLCAQTGSDSVLIA------H 363
I + + + + + + +G H
Sbjct: 196 ITDGSGETSGEGSGEASGEASGEGSGEASGESSGQGSGEASGEGSGELEPTCEGKADGIH 255
Query: 362 EN--CD-KFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNV-DCGSRIIP 225
N C F C ++ CP +L++NP+ CDWP++V +C P
Sbjct: 256 PNGVCSTNFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAECAGLPTP 305
Score = 35.1 bits (77), Expect = 0.057
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -1
Query: 686 NDSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV 543
N DG+ E +F C + CP +L+YN CDW HNV
Sbjct: 26 NALDGLYALGECEPQFLTCSGGIARIMDCPADLIYNEPLLICDWRHNV 73
Score = 32.3 bits (70), Expect = 0.40
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -1
Query: 422 PSAAPTLCAQTGSDSVLIAHENCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNV 249
P+ PT C + G S + F C N + +V+ CP L ++ S CD+ NV
Sbjct: 303 PTPQPT-CEEDGYFSF---GQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNV 356
Score = 31.5 bits (68), Expect = 0.70
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = -1
Query: 374 LIAHENCD-KFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNV 249
L A C+ +F C ++ CP +L+YN CDW NV
Sbjct: 31 LYALGECEPQFLTCSGGIARIMDCPADLIYNEPLLICDWRHNV 73
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 45.2 bits (102), Expect = 5e-05
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -1
Query: 401 CAQTGSDSVLIAHENCDKFYIC-WNHKPVVLSCPPNLLYNPSKEECDWPQNV 249
C++ GS + NC+ FY C W K VV++CP ++NP CDWP V
Sbjct: 1245 CSEHGS--FIADANNCEVFYRCVWGRK-VVMTCPSGTVFNPLLSVCDWPSAV 1293
Score = 42.7 bits (96), Expect = 3e-04
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = -1
Query: 695 CAENDSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV-ECGDRTIP 519
C+E+ S + +C FY+C R V + CP ++NP CDWP V C +
Sbjct: 1245 CSEHGS--FIADANNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVCDWPSAVPSCSGQASD 1302
Query: 518 EN 513
N
Sbjct: 1303 SN 1304
Score = 32.7 bits (71), Expect = 0.30
Identities = 35/168 (20%), Positives = 57/168 (33%), Gaps = 2/168 (1%)
Frame = -1
Query: 743 RYHXNGHADPSLATEICAENDSDGVLVAHEHCT-RFYKCFNSRPVALICPPNLLYNPSNE 567
R N D + E + DG+ C+ +F C CP +L++N +
Sbjct: 82 RVDENTEEDDTPYAEFDCTSKQDGIYSIG--CSNQFISCVAGGAYMAKCPDSLVFNERTQ 139
Query: 566 QC-DWPHNVECGDRTIPENVEDEDNDNAXXXXXXXXXXXXXXXXXXNCDPSAAPTLCAQT 390
C + V+ T P+ ED + P + C
Sbjct: 140 DCRESCDEVKQDTTTAPQVYEDGEEGYGEASGEIAGDYERQPSNE---QPDSIDFDC--N 194
Query: 389 GSDSVLIAHENCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNVD 246
G + A D FY C N+ CPP ++N +++ CD+ D
Sbjct: 195 GLEDGNYADGCNDVFYSCSNNMVFQRYCPPGTVFNINQQSCDFQCTTD 242
Score = 31.1 bits (67), Expect = 0.93
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = -1
Query: 356 CDKFYI-CWNHKPVVLSCPPNLLYNPSKEECDWPQNV-DCGSR 234
C + YI C N +V C +L +N + +EC + V +CGS+
Sbjct: 704 CSQKYIQCSNGAAIVRRCGESLYFNEATQECTYRDEVPECGSQ 746
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = -1
Query: 347 FYICWNHKPVVLSCPPNLLYNPSKEECDWPQNV-DC 243
FYIC N + V +CP NL++NP ECD+ NV DC
Sbjct: 591 FYICANGQVVATTCPANLIFNPYVGECDYSTNVRDC 626
Score = 41.5 bits (93), Expect = 7e-04
Identities = 34/143 (23%), Positives = 53/143 (37%), Gaps = 7/143 (4%)
Frame = -1
Query: 650 CTRFY-KCFNSRPVALICPPNLLYNPSNEQCDWPHNVECGDRTIPENVEDEDNDNAXXXX 474
C ++ KC+N + CP L Y+ ++CD NVE PE D A
Sbjct: 701 CEKYLIKCYNRKTFKFPCPSGLYYSRLQDKCDVKENVE----GCPEYKPTTDATPAAEQP 756
Query: 473 XXXXXXXXXXXXXXNCDPSAAPTLCAQTGSDSVLIAHEN----CDKFYI-CWNHKPVVLS 309
+ T Q + + + N C+ +YI C N + +
Sbjct: 757 VISYQNYGYSQSTTKAYNPSVTTPSPQHAAFCERLENGNYGLDCEDYYISCNNFETTINR 816
Query: 308 CPPNLLYNPSKEECDWPQNV-DC 243
CP L Y+ CD+ ++V DC
Sbjct: 817 CPAGLFYSKLNNRCDYKEHVEDC 839
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -1
Query: 641 FYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV 543
FY C N + VA CP NL++NP +CD+ NV
Sbjct: 591 FYICANGQVVATTCPANLIFNPYVGECDYSTNV 623
Score = 39.5 bits (88), Expect = 0.003
Identities = 31/140 (22%), Positives = 48/140 (34%), Gaps = 5/140 (3%)
Frame = -1
Query: 650 CTRFY-KCFNSRPVALICPPNLLYNPSNEQCDWPHNVE-CGD-RTIPENVED-EDNDNAX 483
C +Y C N CP L Y+ N +CD+ +VE C + + P E
Sbjct: 800 CEDYYISCNNFETTINRCPAGLFYSKLNNRCDYKEHVEDCPEYKPTPSTTPAAEQPGTTK 859
Query: 482 XXXXXXXXXXXXXXXXXNCDPSAAPTLCAQTGSDSVLIAHENCDKFYI-CWNHKPVVLSC 306
D + + +G + A C + Y+ C + ++ SC
Sbjct: 860 YTTYNYPNIDYTSTTPGPVDTTPLAKAFSCSGRPDGIYALPYCSQDYVQCMQGRSLISSC 919
Query: 305 PPNLLYNPSKEECDWPQNVD 246
P L YN C + VD
Sbjct: 920 APGLFYNEKNGMCAYKHTVD 939
Score = 36.3 bits (80), Expect = 0.025
Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = -1
Query: 359 NCDKFYI-CWNHKPVVLSCPPNLLYNPSKEECDWPQNVD 246
+C+K+ I C+N K CP L Y+ +++CD +NV+
Sbjct: 700 DCEKYLIKCYNRKTFKFPCPSGLYYSRLQDKCDVKENVE 738
Score = 35.5 bits (78), Expect = 0.043
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = -1
Query: 710 LATEICAENDSDGVLVAHEHCTRFY-KCFNSRPVALICPPNLLYNPSNEQCDWPHNVE 540
LA DG+ A +C++ Y +C R + C P L YN N C + H V+
Sbjct: 883 LAKAFSCSGRPDGIY-ALPYCSQDYVQCMQGRSLISSCAPGLFYNEKNGMCAYKHTVD 939
Score = 35.1 bits (77), Expect = 0.057
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = -1
Query: 656 EHCTR-FYKCFNSRPVALICPPNLLYNPSNEQCDWPHNVE 540
E CT+ F+ C + R A CP +L++N + CD+ N E
Sbjct: 444 EACTKSFFTCHDGRAFANDCPGDLVFNKATGTCDFAENCE 483
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/50 (28%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -1
Query: 392 TGSDSVLIAHENCDK-FYICWNHKPVVLSCPPNLLYNPSKEECDWPQNVD 246
TG + E C K F+ C + + CP +L++N + CD+ +N +
Sbjct: 434 TGKPNGKYIKEACTKSFFTCHDGRAFANDCPGDLVFNKATGTCDFAENCE 483
Score = 31.1 bits (67), Expect = 0.93
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -1
Query: 401 CAQTGSDSVLIAHENCDK-FYICWNHKPVVLSCPPNLLYNPSKEECDWPQNV-DC 243
C TG D + C F+ C N K +CP L+Y + CD+P++V DC
Sbjct: 203 CKVTG-DMHFTDNVKCSPYFWQCSNGKLFRKTCPEKLIYVLDQNLCDFPESVKDC 256
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1
Query: 641 FYKCFNSRPVALICPPNLLYNPSNEQCDWPHNVE 540
F++C N + CP L+Y CD+P +V+
Sbjct: 221 FWQCSNGKLFRKTCPEKLIYVLDQNLCDFPESVK 254
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = -1
Query: 716 PSLATEICAENDSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPH-NVE 540
P++ ++ C S+G+ + C N R + C L+YN + C++ N +
Sbjct: 1017 PAVPSDFCTIR-SNGLHHLKMCSPHYIVCDNGRAFSGTCIAPLVYNGDTQTCNYKSTNKD 1075
Query: 539 CGDRTIPENVE 507
CG+ IP E
Sbjct: 1076 CGNDYIPPVAE 1086
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -1
Query: 704 TEICAENDSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQC 561
T +C+ SDG +C F C +S+ ++ CP L Y+ S + C
Sbjct: 478 TNVCS-GKSDGFYPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKYC 524
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = -1
Query: 419 SAAPTLCAQTGSDSVLIAHENCDKFYICWNHKPVVLSCPPNLLYNPSKEEC 267
+A+ T SD NC F +C + K +SCP L Y+ S + C
Sbjct: 474 TASNTNVCSGKSDGFYPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKYC 524
Score = 31.1 bits (67), Expect = 0.93
Identities = 13/47 (27%), Positives = 18/47 (38%)
Frame = -1
Query: 677 DGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNVEC 537
DG C +F +C N CP L ++ CD P +C
Sbjct: 569 DGFFGVPSDCLKFIRCVNGISYNFECPNGLSFHADTMMCDRPDPSKC 615
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 32.3 bits (70), Expect = 0.40
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -1
Query: 713 SLATEICAENDSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV-EC 537
++A + DG+ +F C + CP +L+Y+P C++ +NV +C
Sbjct: 54 AVAIDTDCSTKEDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQC 113
Query: 536 GDRTIPENV 510
G +P++V
Sbjct: 114 GG--VPQDV 120
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -1
Query: 425 DPSAAPTLCAQTGSDSVLIAHENCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNV- 249
D A T C+ T D + +F C ++ CP +L+Y+P C++ NV
Sbjct: 53 DAVAIDTDCS-TKEDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVP 111
Query: 248 DCG 240
CG
Sbjct: 112 QCG 114
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 32.3 bits (70), Expect = 0.40
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -1
Query: 713 SLATEICAENDSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV-EC 537
++A + DG+ +F C + CP +L+Y+P C++ +NV +C
Sbjct: 54 AVAIDTDCSTKEDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQC 113
Query: 536 GDRTIPENV 510
G +P++V
Sbjct: 114 GG--VPQDV 120
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -1
Query: 425 DPSAAPTLCAQTGSDSVLIAHENCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNV- 249
D A T C+ T D + +F C ++ CP +L+Y+P C++ NV
Sbjct: 53 DAVAIDTDCS-TKEDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVP 111
Query: 248 DCG 240
CG
Sbjct: 112 QCG 114
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -1
Query: 662 AHEHCTRFYK-CFNSRPVALICPPNLLYNPSNEQCDWPHNV-ECGDRTI 522
A E C++ YK C N + IC L ++P +C + EC T+
Sbjct: 533 AIEPCSQHYKNCVNGQEAIFICENGLFFSPEQARCAPADQIAECHQTTV 581
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = -1
Query: 713 SLATEICAENDSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV-EC 537
S T+ C +DG E + C N + + CP L ++ + CD+ NV EC
Sbjct: 208 SAVTKSCV-GKADGFYSFGECSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 32.3 bits (70), Expect = 0.40
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = -1
Query: 713 SLATEICAENDSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV-EC 537
++A + DG+ +F C + CP +L+Y+P C++ +NV +C
Sbjct: 54 AVAIDTDCSTKEDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQC 113
Query: 536 GDRTIPENV 510
G +P++V
Sbjct: 114 GG--VPQDV 120
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -1
Query: 425 DPSAAPTLCAQTGSDSVLIAHENCDKFYICWNHKPVVLSCPPNLLYNPSKEECDWPQNV- 249
D A T C+ T D + +F C ++ CP +L+Y+P C++ NV
Sbjct: 53 DAVAIDTDCS-TKEDGLYAIGGCSPQFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVP 111
Query: 248 DCG 240
CG
Sbjct: 112 QCG 114
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
Frame = -1
Query: 662 AHEHCTRFYK-CFNSRPVALICPPNLLYNPSNEQCDWPHNV-ECGDRTI 522
A E C++ YK C N + IC L ++P +C + EC T+
Sbjct: 533 AIEPCSQHYKNCVNGQEAIFICENGLFFSPEQARCAPADQIAECHQTTV 581
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = -1
Query: 713 SLATEICAENDSDGVLVAHEHCTRFYKCFNSRPVALICPPNLLYNPSNEQCDWPHNV-EC 537
S T+ C +DG E + C N + + CP L ++ + CD+ NV EC
Sbjct: 208 SAVTKSCV-GKADGFYSFGECSDHYTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
>AF024503-12|AAG24092.2| 329|Caenorhabditis elegans Serpentine
receptor, class u protein25 protein.
Length = 329
Score = 30.3 bits (65), Expect = 1.6
Identities = 22/87 (25%), Positives = 39/87 (44%), Gaps = 7/87 (8%)
Frame = +3
Query: 540 LYIMRPVTLLVTRIIQQIWRTNEGYWTTIETFVKSGAVLM-------GDQNTV*IIFSTN 698
L I P+ + T GY T ++ F+ SGA++M G NT ++F+T
Sbjct: 153 LKISIPIVFIYPFFFTFFMFTGSGYCTYMDYFLSSGALVMRITETLFGITNTYPLMFNTF 212
Query: 699 FSSQAGVSVSIPVVSFRFRSSITLSFH 779
F ++++ ++ +TLS H
Sbjct: 213 FWFSTSFTINLILIWKLIHYKLTLSAH 239
>Z82278-10|CAC15860.2| 390|Caenorhabditis elegans Hypothetical
protein Y116F11B.2 protein.
Length = 390
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -2
Query: 604 FVRQICCIILVTSSVTGLIM*SVETEPFQKTSRMRTTIMPAMAIWT 467
F+ IC I+ ++V+G I S E EPF T+ TT +P + T
Sbjct: 4 FLMLICIILFYVNTVSGCIP-SQEIEPFTTTAVPTTTTIPIDPVTT 48
>AL132943-14|CAC14395.2| 390|Caenorhabditis elegans Hypothetical
protein Y116F11B.2 protein.
Length = 390
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = -2
Query: 604 FVRQICCIILVTSSVTGLIM*SVETEPFQKTSRMRTTIMPAMAIWT 467
F+ IC I+ ++V+G I S E EPF T+ TT +P + T
Sbjct: 4 FLMLICIILFYVNTVSGCIP-SQEIEPFTTTAVPTTTTIPIDPVTT 48
>U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical
protein C04E7.4 protein.
Length = 542
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -1
Query: 377 VLIAHENCDKFYICWNHKPVVLSCPPNLL 291
VLIA++NC+ +I N + ++L C N +
Sbjct: 133 VLIANQNCEPRWIAKNREDLLLMCDSNFV 161
>Z81507-4|CAL49434.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 604 MRATGRLLKHL*NLVQCSWATKT-PSESFSAQISVAR 711
++ TG++ +HL NL QCS + T PS S SA S AR
Sbjct: 123 VQLTGQVTEHLRNL-QCSNGSATSPSTSVSASSSSAR 158
>U29612-3|AAA68802.2| 289|Caenorhabditis elegans Hypothetical
protein C09B8.4 protein.
Length = 289
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = -1
Query: 662 AHEHCTRFYKCFNSR--PVALICPPNLLYNPSN 570
A++H ++ K +N + VALICPP + N
Sbjct: 66 ANKHMEKYSKLYNDKGYDVALICPPTFSFTVPN 98
>DQ523832-1|ABF71877.1| 598|Caenorhabditis elegans P21-activated
kinase MAX-2 protein.
Length = 598
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 604 MRATGRLLKHL*NLVQCSWATKT-PSESFSAQISVAR 711
++ TG++ +HL NL QCS + T PS S SA S AR
Sbjct: 123 VQLTGQVTEHLRNL-QCSNGSATSPSTSVSASSSSAR 158
>AL032639-12|CAL49443.1| 598|Caenorhabditis elegans Hypothetical
protein Y38F1A.10a protein.
Length = 598
Score = 27.9 bits (59), Expect = 8.7
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 604 MRATGRLLKHL*NLVQCSWATKT-PSESFSAQISVAR 711
++ TG++ +HL NL QCS + T PS S SA S AR
Sbjct: 123 VQLTGQVTEHLRNL-QCSNGSATSPSTSVSASSSSAR 158
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,143,877
Number of Sequences: 27780
Number of extensions: 368011
Number of successful extensions: 918
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 915
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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