BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV11h18f (764 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_03_0285 - 14604499-14604608,14604692-14605203,14605339-146054... 31 1.0 >01_03_0285 - 14604499-14604608,14604692-14605203,14605339-14605418, 14605597-14605699,14605759-14605907,14606088-14606180, 14606289-14606675,14607690-14608124,14608198-14608311, 14608405-14608453,14608684-14608843,14608941-14609499 Length = 916 Score = 31.1 bits (67), Expect = 1.0 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +2 Query: 476 AEKDSDGVLVAHEHCTRFYKCFDSHPVALI 565 +EKD DGV+ H HC+ Y+ D+ ++ Sbjct: 806 SEKDKDGVIELHNHCSSVYQEGDARSALIV 835 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 17,939,284 Number of Sequences: 37544 Number of extensions: 333000 Number of successful extensions: 777 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 729 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 777 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 2051430072 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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