BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV11h17r (742 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pomb... 47 3e-06 SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyce... 41 2e-04 SPAPB24D3.10c |agl1|agl|alpha-glucosidase Agl1|Schizosaccharomyc... 37 0.003 SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces... 30 0.30 SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 29 0.53 SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr... 29 0.53 SPAC3F10.02c |trk1|sptrk|potassium ion transporter Trk1|Schizosa... 28 1.2 SPAC1851.04c ||SPAC27D7.01c|guanyl-nucleotide exchange factor |S... 26 4.9 SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy... 26 4.9 SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 26 6.5 SPAC1705.03c ||SPAC23H4.19|conserved fungal family|Schizosacchar... 25 8.6 >SPAC1002.03c |gls2||glucosidase II Gls2|Schizosaccharomyces pombe|chr 1|||Manual Length = 923 Score = 46.8 bits (106), Expect = 3e-06 Identities = 38/159 (23%), Positives = 66/159 (41%), Gaps = 8/159 (5%) Frame = -2 Query: 564 DKDTLWDFNNGLATLVTTLLQMNLNGYTLVLPDMIGGNGYNESPSKELLVRWLQANVFMP 385 D T W+ G + T+L ++G D+ G G +P EL VRW + +F P Sbjct: 600 DTMTTWEHLRGS---IPTVLTNGISGMAFSGADVAGFFG---NPDAELFVRWYETAIFYP 653 Query: 384 TLQ-YSFV------PWDHDEEAVEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPIWW 226 + ++ + PW + E + R+ + A S G P+ P + Sbjct: 654 FFRAHAHIDTKRREPWLYGEPYTSLVRELLRIRYRLLPTWYTAFYNSHTHGFPILYPQFL 713 Query: 225 LDPTDQDALAVWDEFLLGER-VLAAPVLQQGAVSRDVYL 112 + P D++ A+ D+F +G+ +L PV +YL Sbjct: 714 MHPEDEEGFAIDDQFYVGDSGLLVKPVTHPSIDKITIYL 752 >SPAC30D11.01c ||SPAC56F8.01|alpha-glucosidase|Schizosaccharomyces pombe|chr 1|||Manual Length = 993 Score = 41.1 bits (92), Expect = 2e-04 Identities = 31/136 (22%), Positives = 59/136 (43%), Gaps = 6/136 (4%) Frame = -2 Query: 531 LATLVTTLLQMNLNGYTLVLPDMIGGNGYNESPSKELLVRWLQANVFMPTLQ----YSFV 364 + + ++++L NL G +V D+ G YN + +EL RW+ F+P + + Sbjct: 680 MVSSISSILTFNLLGIPMVGADVCG---YNGNTDEELCARWMALGAFLPFYRNHNSLGSI 736 Query: 363 PWDHDEEA--VEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPIWWLDPTDQDALAVW 190 P + A E R + M + GTP+ P+++ P +V Sbjct: 737 PQEPFRWASVAEASRSAIEIRYSLLPYWYTLMHTASVDGTPMVRPLFFEFPKQISLASVD 796 Query: 189 DEFLLGERVLAAPVLQ 142 +F++G +L +P L+ Sbjct: 797 KQFMIGTALLISPALE 812 >SPAPB24D3.10c |agl1|agl|alpha-glucosidase Agl1|Schizosaccharomyces pombe|chr 1|||Manual Length = 969 Score = 36.7 bits (81), Expect = 0.003 Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 7/148 (4%) Frame = -2 Query: 564 DKDTLWDFNNGLATLVTTLLQMNLNGYTLVLPDMIGGNGYNESPSKELLVRWLQANVFMP 385 D +LW + + ++ ++ N+ G +V D+ G G ++ +EL RW+ F P Sbjct: 647 DNHSLW---SNMFFSISGMIVFNMMGIPMVGADVCGFLGDSD---EELCSRWMAMGAFSP 700 Query: 384 -------TLQYSFVPWDHDEEAVEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPIWW 226 Q S P+ A E R+ ++ M + Q GTP ++ Sbjct: 701 FYRNHNNIYQISQEPYTWSSVA-EASRRAMYIRYSLLPYWYTIMAKASQDGTPALRALFV 759 Query: 225 LDPTDQDALAVWDEFLLGERVLAAPVLQ 142 P D V +F++G+ +L PVL+ Sbjct: 760 EFPNDPTLADVDRQFMVGDSLLVTPVLE 787 >SPAC1039.11c ||SPAC922.02c|alpha-glucosidase|Schizosaccharomyces pombe|chr 1|||Manual Length = 995 Score = 30.3 bits (65), Expect = 0.30 Identities = 32/148 (21%), Positives = 59/148 (39%), Gaps = 7/148 (4%) Frame = -2 Query: 564 DKDTLWDFNNGLATLVTTLLQMNLNGYTLVLPDMIGGNGYNESPSKELLVRWLQANVFMP 385 D +LW + + + L N+ G +V D+ G G + +EL RW+ F+P Sbjct: 669 DNYSLW---SNMIFSIPGALTFNMVGLPMVGADVCGFMGNTD---EELCSRWMALGAFLP 722 Query: 384 TLQ-------YSFVPWDHDEEAVEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPIWW 226 + S P+ E E R ++ M + +G P+ P+++ Sbjct: 723 FYRNHNSLGSISQEPY-RWESVAESSRCAMNIRYSLLPYWYTLMYEASSQGLPLIRPLFF 781 Query: 225 LDPTDQDALAVWDEFLLGERVLAAPVLQ 142 P + +F++G +L PVL+ Sbjct: 782 EFPNEPSLANADRQFMVGSALLVTPVLE 809 >SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces pombe|chr 3|||Manual Length = 401 Score = 29.5 bits (63), Expect = 0.53 Identities = 15/70 (21%), Positives = 31/70 (44%) Frame = -2 Query: 510 LLQMNLNGYTLVLPDMIGGNGYNESPSKELLVRWLQANVFMPTLQYSFVPWDHDEEAVEI 331 +++ ++ Y+L+L + E + +L+ Q + ++P +PWDH + Sbjct: 87 VMEPSMADYSLLLTQPVFTMPSIEHNTIQLVFEEFQFDAYLPCTPAELIPWDHGSFTMNQ 146 Query: 330 CRKYTHLHAE 301 YT H E Sbjct: 147 EDAYTGQHGE 156 >SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr 3|||Manual Length = 1024 Score = 29.5 bits (63), Expect = 0.53 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = +3 Query: 630 RTWQRLSRKTQPRDQDGDQCRRSVLESVETN*IRQRR 740 + W+ S +T PR+ D+ SV E VE RQ+R Sbjct: 23 KDWKDASVETTPRETSVDEDNTSVFEDVEAQDSRQKR 59 >SPAC3F10.02c |trk1|sptrk|potassium ion transporter Trk1|Schizosaccharomyces pombe|chr 1|||Manual Length = 841 Score = 28.3 bits (60), Expect = 1.2 Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%) Frame = -2 Query: 303 EYADEIVAAMEASIQKGTPVNPPIWWLDPTDQDALAVWDEFLL-GERVLAAPVLQQGAVS 127 +Y D + A A+ Q G L+ D ++L++W +F+L G + P+ G++S Sbjct: 48 KYIDALFLASSATTQTG---------LNSVDLNSLSIWQQFILYGFTAITVPIWMHGSIS 98 >SPAC1851.04c ||SPAC27D7.01c|guanyl-nucleotide exchange factor |Schizosaccharomyces pombe|chr 1|||Manual Length = 1052 Score = 26.2 bits (55), Expect = 4.9 Identities = 9/29 (31%), Positives = 18/29 (62%) Frame = -2 Query: 393 FMPTLQYSFVPWDHDEEAVEICRKYTHLH 307 F+P + + + D E+A+++ + Y HLH Sbjct: 856 FLPEIVRALLLLDKREQAIDLVKTYGHLH 884 >SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces pombe|chr 2|||Manual Length = 573 Score = 26.2 bits (55), Expect = 4.9 Identities = 12/37 (32%), Positives = 22/37 (59%) Frame = +1 Query: 229 PDGRVHGSSFLDGRLHSGHDLISIFGVKMRVFAADFY 339 P+G+ H S + G +++ ++ +IFG M F DF+ Sbjct: 84 PNGKGHYPSGIRGLVNAASNIGNIFGQLMFGFMGDFF 120 >SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces pombe|chr 2|||Manual Length = 932 Score = 25.8 bits (54), Expect = 6.5 Identities = 12/35 (34%), Positives = 18/35 (51%) Frame = -2 Query: 162 LAAPVLQQGAVSRDVYLPRGSWRDGVTGELHQGPL 58 +AAP G VS + RG+W + H+GP+ Sbjct: 239 IAAPNAMNGPVSCVSIIERGTWTSEINLIGHEGPV 273 >SPAC1705.03c ||SPAC23H4.19|conserved fungal family|Schizosaccharomyces pombe|chr 1|||Manual Length = 421 Score = 25.4 bits (53), Expect = 8.6 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = +2 Query: 146 STGAASTRSPNKNSSQTAKASWSVGSNHQMGGFT 247 +TG+A+T S + +SS ++ +S S S+ GFT Sbjct: 372 ATGSATTTSYSSDSSASSSSSSSHESSAASNGFT 405 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 3,385,477 Number of Sequences: 5004 Number of extensions: 77448 Number of successful extensions: 217 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 211 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 216 length of database: 2,362,478 effective HSP length: 71 effective length of database: 2,007,194 effective search space used: 351258950 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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