Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11h17r
(742 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0104 + 13434954-13435145,13436220-13436288,13436386-134365... 68 7e-12
03_02_0168 + 6094658-6096220,6096335-6096608,6096671-6096821,609... 62 4e-10
06_03_1108 - 27661916-27662812,27662889-27663529,27663613-276645... 60 1e-09
06_03_1114 + 27719099-27719252,27719340-27719570,27720508-277211... 60 2e-09
07_03_0108 + 13481249-13481464,13484556-13484693,13485320-134853... 59 4e-09
01_01_0195 + 1697447-1697691,1698150-1698808,1699754-1701570,170... 51 1e-06
01_01_1161 + 9244628-9245748,9247696-9247828,9248233-9248448,924... 42 4e-04
02_04_0509 - 23554609-23555241,23555371-23556318 32 0.55
01_06_0777 + 31919196-31919909,31919984-31920082 31 0.73
12_01_0272 + 1985348-1986036,1986142-1988020 31 1.3
05_01_0520 - 4492182-4492780,4496886-4497951 31 1.3
08_01_0461 - 4063614-4064375,4064439-4066017,4066041-4066086,406... 30 1.7
05_04_0240 + 19325981-19326260,19327135-19327156,19327361-193274... 30 2.2
08_02_0126 + 12835431-12838183,12838471-12838566,12838920-128389... 29 3.9
11_06_0515 - 24483282-24483478,24486451-24486927,24486949-24489580 29 5.1
11_01_0271 + 2039100-2041760 29 5.1
02_05_0797 - 31805956-31806902,31806992-31807505 29 5.1
12_01_0610 + 5030130-5030247,5030957-5033193 28 6.8
02_05_0798 - 31810579-31811516,31811646-31811666,31811715-31812225 28 6.8
11_06_0307 - 22250221-22250482,22250664-22250758 28 9.0
10_08_0798 + 20649370-20649428,20649515-20649719 28 9.0
09_04_0524 + 18321110-18323978,18324098-18324576 28 9.0
04_04_0702 + 27383876-27384862 28 9.0
04_01_0352 - 4619946-4619984,4620062-4620133,4621515-4621880,462... 28 9.0
03_02_0067 + 5364713-5364936,5365513-5367016,5367207-5368250,536... 28 9.0
02_05_0912 - 32689665-32690007,32690117-32690275,32690380-326905... 28 9.0
02_04_0317 + 21996324-21996681,21996833-21996859,21997299-219982... 28 9.0
>07_03_0104 +
13434954-13435145,13436220-13436288,13436386-13436523,
13436612-13436729,13437214-13437296,13438305-13438400,
13438552-13438720,13438798-13438940,13439027-13439113,
13439197-13439382,13439956-13440123,13441028-13441148,
13441453-13441522,13441694-13441781,13441866-13442018
Length = 626
Score = 68.1 bits (159), Expect = 7e-12
Identities = 60/205 (29%), Positives = 82/205 (40%), Gaps = 8/205 (3%)
Frame = -2
Query: 660 ESYVRAVAKFGPMIEIRAGMRTQDLPVFVRMVDKDTLWDFNNGLATLVTTLLQMNLNGYT 481
E +A + P + RAG D + W+ L V +LQ+ L+G
Sbjct: 377 EGMAKANTEKRPFVLTRAGFIGSQRYAATWTGDNLSNWEH---LHMSVPMVLQLGLSGQP 433
Query: 480 LVLPDMIGGNGYNESPSKELLVRWLQANVFMP-------TLQYSFVPWDHDEEAVEICRK 322
L PD IGG N +P +L RW+ P T PW EE E+CR
Sbjct: 434 LSGPD-IGGFAGNATP--KLFGRWMGLGALFPFSRGHTETGSIDHEPWSFGEECEEVCRL 490
Query: 321 YTHLHAEYADEIVAAMEASIQKGTPVNPPIWWLDPTDQDALAVWDEFLLGE-RVLAAPVL 145
I S KGTPV P+++ DP D + + FLLG V A+ V
Sbjct: 491 ALLRRYRLLPHIYTLFYFSHMKGTPVAAPVFFADPQDPELRKIETSFLLGPLLVCASTVP 550
Query: 144 QQGAVSRDVYLPRGSWRDGVTGELH 70
+GA LP+G+W G+ H
Sbjct: 551 DKGAHECSHKLPKGNWLPFDFGDSH 575
>03_02_0168 + 6094658-6096220,6096335-6096608,6096671-6096821,
6097052-6097262,6097344-6097550,6097982-6098350
Length = 924
Score = 62.1 bits (144), Expect = 4e-10
Identities = 45/177 (25%), Positives = 72/177 (40%), Gaps = 10/177 (5%)
Frame = -2
Query: 564 DKDTLWDFNNGLATLVTTLLQMNLNGYTLVLPDMIGGN--GYNESPSKELLVRWLQANVF 391
D WD L + + +L + L G T + + G + G+ +P +LLVRW Q F
Sbjct: 586 DNSADWDH---LKSSIPMVLTLGLTGMTFSVGALTGADIGGFFGNPEPDLLVRWYQVGAF 642
Query: 390 MPTLQYSF-------VPWDHDEEAVEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPI 232
P + PW E + R+ H+ + G PV P+
Sbjct: 643 YPFFRGHAHHDTKRREPWLFGERRTALMREAIHMRYSLLPYYYTLFREASVTGVPVMRPL 702
Query: 231 WWLDPTDQDALAVWDEFLLGERVLAAPVLQQGAVSRDVYLP-RGSWRDGVTGELHQG 64
W P D++ + F++G +LA + ++G S VYLP W D G ++G
Sbjct: 703 WLEFPDDKETYNNGEAFMVGPSLLAQGIYEEGQKSVSVYLPGEELWYDLRNGSPYKG 759
>06_03_1108 - 27661916-27662812,27662889-27663529,27663613-27664592,
27664854-27664934,27668582-27668634,27669294-27669308,
27670069-27670296
Length = 964
Score = 60.5 bits (140), Expect = 1e-09
Identities = 41/150 (27%), Positives = 64/150 (42%), Gaps = 9/150 (6%)
Frame = -2
Query: 519 VTTLLQMNLNGYTLVLPDMIGGNGYNESPSKELLVRWLQANVFMP---------TLQYSF 367
+ T+L L G ++ D+ G G + ++EL RW+Q F P T++
Sbjct: 631 INTMLSFGLFGIPMIGADICGFGG---NTTEELCSRWIQLGAFYPFSRDHSAIGTVRREL 687
Query: 366 VPWDHDEEAVEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPIWWLDPTDQDALAVWD 187
W E RK L + M + G P+ P+++ P D + +
Sbjct: 688 YLW---ESVARSARKALGLRYRLLPYLYTLMYEAHTTGAPIARPLFFSYPGDVETYGIDR 744
Query: 186 EFLLGERVLAAPVLQQGAVSRDVYLPRGSW 97
+FLLG VL +PVL+ GA + Y P G W
Sbjct: 745 QFLLGRGVLVSPVLEPGATTVTAYFPAGRW 774
>06_03_1114 +
27719099-27719252,27719340-27719570,27720508-27721148,
27721225-27722124
Length = 641
Score = 59.7 bits (138), Expect = 2e-09
Identities = 45/165 (27%), Positives = 67/165 (40%), Gaps = 9/165 (5%)
Frame = -2
Query: 564 DKDTLWDFNNGLATLVTTLLQMNLNGYTLVLPDMIGGNGYNESPSKELLVRWLQANVFMP 385
D WD L + T+L L G ++ D+ G G + ++EL RW+Q F P
Sbjct: 295 DNFATWD---DLRYSINTMLSFGLFGIPMIGADICGFGG---NTTEELCSRWIQLGAFYP 348
Query: 384 ---------TLQYSFVPWDHDEEAVEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPI 232
T++ W E RK L + M + G P+ P+
Sbjct: 349 FSRDHSAIGTVRRELYLW---ESVARSARKALGLRYRLLPYLYTLMYEAHTTGAPIARPL 405
Query: 231 WWLDPTDQDALAVWDEFLLGERVLAAPVLQQGAVSRDVYLPRGSW 97
++ P D + +FLLG VL +PVL+ GA + Y P G W
Sbjct: 406 FFSYPGDVATYGIDRQFLLGRGVLVSPVLEPGATTVTAYFPAGRW 450
>07_03_0108 +
13481249-13481464,13484556-13484693,13485320-13485388,
13485462-13485599,13485685-13485802,13486265-13486347,
13486921-13487013,13487801-13487969,13488056-13488129,
13488448-13488633,13490009-13490101,13490469-13490534,
13490618-13490785,13491199-13491319,13492072-13492141,
13492389-13492476,13492565-13492685,13492964-13493157,
13493239-13493347,13493488-13493643,13493858-13493957,
13494115-13494288,13494549-13494694,13494796-13494860,
13495013-13495018
Length = 986
Score = 58.8 bits (136), Expect = 4e-09
Identities = 43/155 (27%), Positives = 62/155 (40%), Gaps = 8/155 (5%)
Frame = -2
Query: 510 LLQMNLNGYTLVLPDMIGGNGYNESPSKELLVRWLQANVFMPTLQ-------YSFVPWDH 352
++ + L+G PD IGG N +P +L RW+ P + PW
Sbjct: 478 IVDLGLSGQPFAGPD-IGGFAGNATP--KLFGRWMGVGALFPFSRGHSDKGSLDHEPWSF 534
Query: 351 DEEAVEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPIWWLDPTDQDALAVWDEFLLG 172
EE E+CR I S GTPV P+++ DP D + + FLLG
Sbjct: 535 GEECEEVCRLALLRRYRLLPHIYTLFYLSHTNGTPVAAPVYFADPQDLELRKIETSFLLG 594
Query: 171 ERVLAAPVL-QQGAVSRDVYLPRGSWRDGVTGELH 70
++ A +GA LP+G W G+ H
Sbjct: 595 SLLVCASTCPDKGAHESSQKLPKGIWLPFDFGDSH 629
>01_01_0195 + 1697447-1697691,1698150-1698808,1699754-1701570,
1701700-1701771
Length = 930
Score = 50.8 bits (116), Expect = 1e-06
Identities = 36/147 (24%), Positives = 63/147 (42%), Gaps = 6/147 (4%)
Frame = -2
Query: 519 VTTLLQMNLNGYTLVLPDMIGGNGYNESPSKELLVRWLQANVFMPTLQ--YSFVPWDHD- 349
++T+L + G +V D+ G + P++EL RW++ F P + +F +
Sbjct: 584 ISTMLNFGIFGMPMVGADICG---FYPQPTEELCNRWIELGAFYPFSRDHANFASPRQEL 640
Query: 348 ---EEAVEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPIWWLDPTDQDALAVWDEFL 178
E + R + + + G PV P+++ P + ++L
Sbjct: 641 YVWESVAKSARNALGMRYRLLPYLYTLNYQAHLTGAPVARPVFFSFPDFTPCYGLSTQYL 700
Query: 177 LGERVLAAPVLQQGAVSRDVYLPRGSW 97
LG V+ +PVL+QGA S P GSW
Sbjct: 701 LGASVMVSPVLEQGATSVSAMFPPGSW 727
>01_01_1161 + 9244628-9245748,9247696-9247828,9248233-9248448,
9249802-9249957,9250788-9250979,9251118-9251234,
9251822-9252193
Length = 768
Score = 42.3 bits (95), Expect = 4e-04
Identities = 42/172 (24%), Positives = 76/172 (44%), Gaps = 17/172 (9%)
Frame = -2
Query: 540 NNGLATLVTTLLQMNLNGYTLVLPDMIGGNGYNESP------SKELLVRWLQANVFMPTL 379
N+G+ + V LL ++G+ L D GG + P S+ELL+RWL+ + F
Sbjct: 544 NDGIKSSVVGLLTGGMSGFPLNHGDA-GGYCTVDLPLLRYRRSEELLLRWLELSAFTVVF 602
Query: 378 QY-------SFVPWDHDEEAVEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPIWWLD 220
+ S + + + + ++ + + +E + +KG PV ++
Sbjct: 603 RTHEGNKPGSNCQFYSNNRTLAHFARCAKIYKAWEFYRIQLVEEAAEKGLPVARHLFLHY 662
Query: 219 PTDQDALAV-WDEFLLGERVLAAPVLQQGAVSRDVYLPR---GSWRDGVTGE 76
P DQ + + +FL+G +L PVL +G + Y P G W+ TG+
Sbjct: 663 PEDQRVQKMTYQQFLVGTEMLVVPVLDKGRSTVTAYFPMSDGGLWKHVWTGD 714
>02_04_0509 - 23554609-23555241,23555371-23556318
Length = 526
Score = 31.9 bits (69), Expect = 0.55
Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Frame = -2
Query: 207 DALAVWDEFLLGERVLAAPVLQQ-GAVSRDVY-LPRGSWRDGVTGELHQ----GPL---W 55
+ +A W F+ LA +L + GA RDV LP G WR V G LHQ GPL
Sbjct: 2 EQVAYW--FICACAFLALVLLVRLGAARRDVVRLPPGPWRLPVVGNLHQLMLRGPLVHRT 59
Query: 54 LRDYPAPLDTLPYFTLE 4
+ D LD P L+
Sbjct: 60 MADLARGLDDAPLMRLQ 76
>01_06_0777 + 31919196-31919909,31919984-31920082
Length = 270
Score = 31.5 bits (68), Expect = 0.73
Identities = 16/46 (34%), Positives = 21/46 (45%)
Frame = +3
Query: 138 PAAVPGQPARALLTRTRPKQPKRPGR*DPTTRWEGSREFLFGWTPP 275
P P +PA A + +R P +P DP E S + GW PP
Sbjct: 57 PLGAPPRPAAAAASPSRAALPDKPWVCDPPPEPEPSASWGCGWGPP 102
>12_01_0272 + 1985348-1986036,1986142-1988020
Length = 855
Score = 30.7 bits (66), Expect = 1.3
Identities = 25/88 (28%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Frame = -2
Query: 294 DEIVAAMEASIQKGTPVNPPIWWLDPTDQDALAVWDE----FLLGERVLAAPVLQQGAVS 127
+ +++ + A +++ P D D + +WDE +LL LAA V Q A+S
Sbjct: 658 NSLLSKLGAPLEEDAGERLPHTAADGGDGEPRDLWDEKLPKYLLLLAALAAAVTYQAAMS 717
Query: 126 RDVYLPRGSWRDGVTGELHQGPLWLRDY 43
P G W DG T + P+ L +Y
Sbjct: 718 P----PGGLWDDGQTEHIVGDPVLLTNY 741
>05_01_0520 - 4492182-4492780,4496886-4497951
Length = 554
Score = 30.7 bits (66), Expect = 1.3
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +1
Query: 556 VFVNHADEDWEVLGSHARSDLDHWAELGNGSHVRLNHVTRMEI 684
+ VNHA W VL ARSD A LG V +H E+
Sbjct: 355 ILVNHATRQWVVLPESARSDKRQIAYLGFDPAVSSSHFHVFEL 397
>08_01_0461 - 4063614-4064375,4064439-4066017,4066041-4066086,
4066416-4066933,4067435-4067694,4068089-4068594,
4068667-4071319
Length = 2107
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = -2
Query: 405 QANVFMPTLQYSFVPWDHDEEAV-EICRKYTHLHAE 301
+AN+F P+L +++P +HDE + E C T L E
Sbjct: 1824 EANLFAPSLSNAYLPSEHDENHIEEKCSNATLLEDE 1859
>05_04_0240 +
19325981-19326260,19327135-19327156,19327361-19327484,
19327721-19327811,19327984-19328073,19328450-19328550,
19328702-19328866
Length = 290
Score = 29.9 bits (64), Expect = 2.2
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = -2
Query: 492 NGYTLVLPDMIGGNGYNESPSKELLVRWLQAN 397
+GY +V+PD++ G+ Y + P++ V W+ A+
Sbjct: 110 SGYYVVVPDLLYGDPYTDDPARPFWV-WIMAH 140
>08_02_0126 +
12835431-12838183,12838471-12838566,12838920-12838971,
12839198-12839298,12839349-12839370
Length = 1007
Score = 29.1 bits (62), Expect = 3.9
Identities = 18/36 (50%), Positives = 18/36 (50%)
Frame = -1
Query: 250 SREPSHLVVGSYRPGRFGCLGRVLVRRARAGCPGTA 143
SRE SH SYRPG F L R LV R G A
Sbjct: 116 SRERSH----SYRPGTFAALARRLVDARRYAAAGRA 147
>11_06_0515 - 24483282-24483478,24486451-24486927,24486949-24489580
Length = 1101
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/84 (23%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = -2
Query: 522 LVTTLLQMNLNGYTLVLPDMIGGNGYNESPSKELL-VRWLQANVFMPTLQYSFVPWDHDE 346
L +L ++ N L D+ G+ S E +R+LQ F+ Y +DH
Sbjct: 422 LFCSLFPLDFNFTAEELADLFAAKGFIPSTVPEAQRIRFLQQ--FLDECFYPVEEYDHGG 479
Query: 345 EAVEICRKYTHLHAEYADEIVAAM 274
+ K H+ +YAD + +++
Sbjct: 480 RHMYRMHKILHIFVQYADRVSSSI 503
>11_01_0271 + 2039100-2041760
Length = 886
Score = 28.7 bits (61), Expect = 5.1
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Frame = -2
Query: 195 VWDE----FLLGERVLAAPVLQQGAVSRDVYLPRGSWRDGVTGELHQGPLWLRDY 43
+WDE +LL LAA V Q A+S P G W DG T + P+ L +Y
Sbjct: 722 LWDEKLPKYLLLLAALAAAVTYQAAMSP----PGGLWDDGQTEHIVGDPVLLTNY 772
>02_05_0797 - 31805956-31806902,31806992-31807505
Length = 486
Score = 28.7 bits (61), Expect = 5.1
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Frame = -2
Query: 606 GMRTQDLPVFVRMVDKDT-LWDFNNGLATLVTTLLQMNLNGYTLVLPDMI 460
G+R +D+P F+R D+D + +F++G A + LN + V D++
Sbjct: 193 GIRLRDMPSFIRTTDRDEFMLNFDSGEAQNARHAQGLILNTFDAVEHDVV 242
>12_01_0610 + 5030130-5030247,5030957-5033193
Length = 784
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = -3
Query: 371 RLCPGIMMKRQ*KSAANTRIFTPNMLMRSWPLWRRPSKKELP*TLPSGG-WI 219
R C ++ + +A+NT++ P +L+ + P+ RR +K E LP+G W+
Sbjct: 307 RYCKNVVQRHIQVAASNTQMENPVVLVDNHPMCRRNTKGER--VLPNGKVWV 356
>02_05_0798 - 31810579-31811516,31811646-31811666,31811715-31812225
Length = 489
Score = 28.3 bits (60), Expect = 6.8
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -2
Query: 606 GMRTQDLPVFVRMVD-KDTLWDFNNGLATLVTTLLQMNLNGYTLVLPDMI 460
G+R +D+P F+R D D + +F+ G A + LN Y + D++
Sbjct: 199 GIRLKDVPSFIRTTDPDDVMLNFDGGEAQNARKARGLILNTYDALEQDVV 248
>11_06_0307 - 22250221-22250482,22250664-22250758
Length = 118
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 514 RDQRRETVVEVPKGVFVNHADEDWEVLGS 600
R +RR P GVF D +W V+GS
Sbjct: 65 RSRRRGATARNPGGVFALGDDAEWHVIGS 93
>10_08_0798 + 20649370-20649428,20649515-20649719
Length = 87
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -3
Query: 134 PCPGTCICRAAPGGTASPGSFTRVHCG 54
PCPG CR A + G T CG
Sbjct: 12 PCPGGTGCRCASSARSGGGDHTTCSCG 38
>09_04_0524 + 18321110-18323978,18324098-18324576
Length = 1115
Score = 27.9 bits (59), Expect = 9.0
Identities = 16/34 (47%), Positives = 18/34 (52%)
Frame = +2
Query: 413 LTSNSLLGDSL*PFPPIISGSTNVYPLRFICNRV 514
L SN L G P PP I G N+Y LR NR+
Sbjct: 452 LISNELSG----PIPPEIGGCGNLYRLRLSVNRL 481
>04_04_0702 + 27383876-27384862
Length = 328
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 119 TSRDTAPCCSTGAASTRSPNKNSSQTAKASWS 214
TSRDT P S+ A SS +SWS
Sbjct: 265 TSRDTTPATSSAGAEHAGAAAESSPATPSSWS 296
>04_01_0352 -
4619946-4619984,4620062-4620133,4621515-4621880,
4622240-4622713
Length = 316
Score = 27.9 bits (59), Expect = 9.0
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +2
Query: 119 TSRDTAPCCST-GAASTRSPNKNSSQTAKASWSV 217
+ RD C ST GAA+ R P + + TA A W V
Sbjct: 79 SDRDDDGCSSTAGAAARRLPLPSGASTAAAVWPV 112
>03_02_0067 + 5364713-5364936,5365513-5367016,5367207-5368250,
5368467-5368577,5368997-5369068,5369719-5369737,
5369838-5371142,5371317-5371397,5372441-5372604,
5373363-5373466,5373537-5373628,5374079-5374216,
5374370-5374426,5374820-5375046
Length = 1713
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/23 (52%), Positives = 17/23 (73%), Gaps = 3/23 (13%)
Frame = +1
Query: 325 AADFYCLFIM---IPGHKRVLKR 384
AA YCL+++ +PG+KRV KR
Sbjct: 1439 AAGIYCLYLVLETVPGNKRVFKR 1461
>02_05_0912 -
32689665-32690007,32690117-32690275,32690380-32690573,
32690669-32690861,32690956-32692169
Length = 700
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 89 PSRQEPRGRYTSRDTAPCCSTGAASTRSPNKN-SSQTAKASWSVGSNHQMGGFTGV 253
PSR R ++D AP G S + + ++ A A + GS HQ+GG + +
Sbjct: 195 PSRSSARNGTMTKDGAPDRINGTDVIASSSGDVTAVKANARNAAGSTHQLGGASAI 250
>02_04_0317 +
21996324-21996681,21996833-21996859,21997299-21998227,
21998317-21999162
Length = 719
Score = 27.9 bits (59), Expect = 9.0
Identities = 25/101 (24%), Positives = 42/101 (41%)
Frame = -2
Query: 450 GYNESPSKELLVRWLQANVFMPTLQYSFVPWDHDEEAVEICRKYTHLHAEYADEIVAAME 271
GY P E + RWL +PT ++ PWD E ++ L + Y IV ++
Sbjct: 441 GYKFDPHGEYVRRWLPELARLPT-EWIHHPWDAPESVLQAAG--IELGSNYPLPIV-ELD 496
Query: 270 ASIQKGTPVNPPIWWLDPTDQDALAVWDEFLLGERVLAAPV 148
A+ + +W L+ + A+ E LG+ P+
Sbjct: 497 AAKTRLQDALSEMWELEAASRAAMENGMEEGLGDSSDVPPI 537
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,741,797
Number of Sequences: 37544
Number of extensions: 631927
Number of successful extensions: 1951
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1944
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1957111448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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