Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11h17r
(742 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g11720.1 68418.m01369 alpha-glucosidase 1 (AGLU1) identical t... 67 1e-11
At3g23640.1 68416.m02973 glycosyl hydrolase family 31 protein si... 62 3e-10
At5g63840.1 68418.m08014 alpha-glucosidase, putative similar to ... 61 9e-10
At1g68560.1 68414.m07833 alpha-xylosidase (XYL1) identical to al... 48 9e-06
At3g45940.1 68416.m04971 alpha-xylosidase, putative strong simil... 45 6e-05
At1g28460.1 68414.m03499 MADS-box family protein contains simila... 35 0.065
At1g28450.1 68414.m03497 MADS-box family protein similar to MADS... 31 0.61
At5g37310.1 68418.m04481 endomembrane protein 70, putative multi... 28 5.7
At4g08920.1 68417.m01469 cryptochrome 1 apoprotein (CRY1) / flav... 28 5.7
At2g17440.1 68415.m02012 leucine-rich repeat family protein cont... 28 7.5
At1g73930.1 68414.m08562 expressed protein 28 7.5
At1g02640.1 68414.m00214 glycosyl hydrolase family 3 protein sim... 28 7.5
At5g63810.1 68418.m08008 beta-galactosidase, putative / lactase,... 27 9.9
At5g56040.1 68418.m06992 leucine-rich repeat protein kinase, put... 27 9.9
At3g23600.1 68416.m02968 dienelactone hydrolase family protein s... 27 9.9
At2g33540.1 68415.m04111 CTD phosphatase-like protein 3 (CPL3) i... 27 9.9
At1g53300.1 68414.m06041 thioredoxin family protein contains Pfa... 27 9.9
>At5g11720.1 68418.m01369 alpha-glucosidase 1 (AGLU1) identical to
alpha-glucosidase 1 [Arabidopsis thaliana] GI:2323344
Length = 902
Score = 67.3 bits (157), Expect = 1e-11
Identities = 56/224 (25%), Positives = 91/224 (40%), Gaps = 16/224 (7%)
Frame = -2
Query: 714 PQIPVQNGDIDLHPGHVVESYVRAVAKFGPMIEIRAGMRTQDLP--VFVRMVDKDTLWDF 541
P + G+I + H + + A A +++I G R L FV W
Sbjct: 499 PATSIHFGNISEYDAHNLYGLLEAKATHQAVVDI-TGKRPFILSRSTFVSSGKYTAHWTG 557
Query: 540 NNG-----LATLVTTLLQMNLNGYTLVLPDMIGGNGYNESPSKELLVRWLQANVFMP--- 385
+N LA + +L L G +V D+ G ++ ++EL RW+Q F P
Sbjct: 558 DNAAKWEDLAYSIPGILNFGLFGIPMVGADICG---FSHDTTEELCRRWIQLGAFYPFAR 614
Query: 384 ------TLQYSFVPWDHDEEAVEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPIWWL 223
T + WD RK L + M + G P+ P+++
Sbjct: 615 DHSSLGTARQELYLWD---SVASSARKVLGLRMRLLPHLYTLMYEAHVSGNPIARPLFFS 671
Query: 222 DPTDQDALAVWDEFLLGERVLAAPVLQQGAVSRDVYLPRGSWRD 91
P D + +FL+G+ ++ +P L+QGAV+ D Y P G+W D
Sbjct: 672 FPQDTKTYEIDSQFLIGKSIMVSPALKQGAVAVDAYFPAGNWFD 715
>At3g23640.1 68416.m02973 glycosyl hydrolase family 31 protein
similar to alpha-glucosidase II from SP:Q9F234 [Bacillus
thermoamyloliquefaciens]; contains Pfam profile: PF01055
Glycosyl hydrolases family 31
Length = 991
Score = 62.5 bits (145), Expect = 3e-10
Identities = 46/149 (30%), Positives = 63/149 (42%), Gaps = 8/149 (5%)
Frame = -2
Query: 519 VTTLLQMNLNGYTLVLPDMIGGNGYNESPSKELLVRWLQANVFMPTLQY-------SFVP 361
++ +LQ+ L+G L PD IGG N +P L RW+ P + P
Sbjct: 438 ISMVLQLGLSGQPLSGPD-IGGFAGNATP--RLFGRWMGVGAMFPFCRGHSEAGTDDHEP 494
Query: 360 WDHDEEAVEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPIWWLDPTDQDALAVWDEF 181
W EE E+CR + + G PV PI++ DP D AV + F
Sbjct: 495 WSFGEECEEVCRAALKRRYQLLPHFYTLFYIAHTTGAPVAAPIFFADPIDSRLRAVENGF 554
Query: 180 LLGERVLAAPVL-QQGAVSRDVYLPRGSW 97
LLG ++ A L QG+ LPRG W
Sbjct: 555 LLGPLLIYASTLSSQGSHELQHILPRGIW 583
>At5g63840.1 68418.m08014 alpha-glucosidase, putative similar to
alpha-glucosidase GI:2648032 from [Solanum tuberosum]
Length = 921
Score = 60.9 bits (141), Expect = 9e-10
Identities = 47/181 (25%), Positives = 71/181 (39%), Gaps = 8/181 (4%)
Frame = -2
Query: 531 LATLVTTLLQMNLNGYTLVLPDMIGGNGYNESPSKELLVRWLQANVFMPTLQYSF----- 367
L + +L + L G T D+ G+ +P ELLVRW Q + P +
Sbjct: 596 LRVSIPMILTLGLTGITFSGADI---GGFFGNPEPELLVRWYQVGAYYPFFRGHAHHDTK 652
Query: 366 --VPWDHDEEAVEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPIWWLDPTDQDALAV 193
PW E E+ R H + G PV P+W P D+ +
Sbjct: 653 RREPWLFGERNTELMRDAIHTRYTLLPYFYTLFREANVTGVPVVRPLWMEFPQDEATFSN 712
Query: 192 WDEFLLGERVLAAPVLQQGAVSRDVYLP-RGSWRDGVTGELHQGPLWLRDYPAPLDTLPY 16
+ F++G +L V +G VYLP + SW D G+ + G AP +++P
Sbjct: 713 DEAFMVGSGLLVQGVYTKGTTQASVYLPGKESWYDLRNGKTYVGGK-THKMDAPEESIPA 771
Query: 15 F 13
F
Sbjct: 772 F 772
>At1g68560.1 68414.m07833 alpha-xylosidase (XYL1) identical to
alpha-xylosidase precursor GB:AAD05539 GI:4163997 from
[Arabidopsis thaliana]; contains Pfam profile PF01055:
Glycosyl hydrolases family 31; identical to cDNA
alpha-xylosidase precursor (XYL1) partial cds GI:4163996
Length = 915
Score = 47.6 bits (108), Expect = 9e-06
Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 11/156 (7%)
Frame = -2
Query: 531 LATLVTTLLQMNLNGYTLVLPDMIGGNGYNESPSKELLVRWLQANVFMPTLQ-----YS- 370
L ++T+L + G +V D+ G + P++EL RW++ F P + YS
Sbjct: 571 LQVSISTMLNFGIFGVPMVGSDICG---FYPQPTEELCNRWIEVGAFYPFSRDHANYYSP 627
Query: 369 ---FVPWDH--DEEAVEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPIWWLDPTDQD 205
WD D + +Y L Y A M G P+ P+++ P +
Sbjct: 628 RQELYQWDTVADSARNALGMRYKILPFLYTLNYEAHMT-----GAPIARPLFFSFPEYTE 682
Query: 204 ALAVWDEFLLGERVLAAPVLQQGAVSRDVYLPRGSW 97
+FLLG + +PVL+QG + P GSW
Sbjct: 683 CYGNSRQFLLGSSFMISPVLEQGKTEVEALFPPGSW 718
>At3g45940.1 68416.m04971 alpha-xylosidase, putative strong
similarity to alpha-xylosidase precursor GI:4163997 from
[Arabidopsis thaliana]
Length = 868
Score = 44.8 bits (101), Expect = 6e-05
Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 6/151 (3%)
Frame = -2
Query: 531 LATLVTTLLQMNLNGYTLVLPDMIGGNGYNESPSKELLVRWLQANVFMPTLQYSFVPWDH 352
L ++T+L + G +V D+ G + +P +EL RW++ F P + +
Sbjct: 523 LQVSISTMLNFGIFGVPMVGSDICGF--FPPTP-EELCNRWIEVGAFYPFSRDHADYYAP 579
Query: 351 DEE------AVEICRKYTHLHAEYADEIVAAMEASIQKGTPVNPPIWWLDPTDQDALAVW 190
+E E R + + + + G P+ P+++ P + +
Sbjct: 580 RKELYQWGTVAESARNALGMRYKLLPFLYTLNYEAHMSGAPIARPLFFSFPEFTECYGLS 639
Query: 189 DEFLLGERVLAAPVLQQGAVSRDVYLPRGSW 97
+FLLG ++ +PVL+QG + P GSW
Sbjct: 640 KQFLLGSSLMISPVLEQGKTQVEALFPPGSW 670
>At1g28460.1 68414.m03499 MADS-box family protein contains
similarity to MADS-box transcription factor GI:6580947
from [Picea abies]
Length = 182
Score = 34.7 bits (76), Expect = 0.065
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -2
Query: 336 EICRKYTHLHAEY-ADEIVAAMEASIQKGTPVNPPIWW-LDPTD 211
E+C+KY L E DE+ A++ + VN +WW +DP D
Sbjct: 100 ELCKKYNRLVEELKVDEVKVKKAAALAETRVVNKDVWWKVDPND 143
>At1g28450.1 68414.m03497 MADS-box family protein similar to
MADS-box protein GI:2160701 from [Pinus radiata]
Length = 185
Score = 31.5 bits (68), Expect = 0.61
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
Frame = -2
Query: 336 EICRKYTHLHAEY-ADEIVAAMEASIQKGTPVNPPIWW-LDPTD 211
E+C++Y L E DE+ A++ + VN WW DP D
Sbjct: 103 ELCKRYNRLVEELKVDEVKVKKAAALAETRAVNKDAWWKADPND 146
>At5g37310.1 68418.m04481 endomembrane protein 70, putative
multispanning membrane protein, Homo sapiens,
EMBL:HSU94831
Length = 564
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = -2
Query: 423 LLVRWLQANVFMPTLQYSFVPWDHDEEAVE 334
LL+ A + M L+ FV + HDEEAV+
Sbjct: 241 LLLTGFLATILMRVLKNDFVKYAHDEEAVD 270
>At4g08920.1 68417.m01469 cryptochrome 1 apoprotein (CRY1) /
flavin-type blue-light photoreceptor (HY4) contains Pfam
PF03441: FAD binding domain of DNA photolyase; member of
Pfam PF00875: deoxyribodipyrimidine photolyase
superfamily; 99% identical to Cryptochrome 1 apoprotein
(Blue light photoreceptor) (flavin-type blue-light
photoreceptor) (SP:Q43125) [Arabidopsis thaliana]
Length = 681
Score = 28.3 bits (60), Expect = 5.7
Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 2/103 (1%)
Frame = -2
Query: 450 GYNESPSKELLVRWLQANVFMPTLQYSFVPWDHDEEAVEICRKYTHLHAEYADEIVAAME 271
GY P+ E + RWL +PT + PW+ E ++ L + Y IV E
Sbjct: 423 GYKFDPNGEYVRRWLPELSRLPT-DWIHHPWNAPESVLQAAG--IELGSNYPLPIVGLDE 479
Query: 270 ASIQKGTPVNPPIWWLDPTDQDALAVWDEFLLGE--RVLAAPV 148
A + ++ +W L+ + A+ E LG+ V AP+
Sbjct: 480 AKARLHEALS-QMWQLEAASRAAIENGSEEGLGDSAEVEEAPI 521
>At2g17440.1 68415.m02012 leucine-rich repeat family protein
contains Pfam PF00560: Leucine Rich Repeats
Length = 526
Score = 27.9 bits (59), Expect = 7.5
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = -2
Query: 645 AVAKFGPMIEIRAGMRTQDLPVFVRMVDK-DTLWDFNNGLATLVTTLLQMNLNGYTLVLP 469
++ K +IE+ A TQ+L + R++D+ + L D L++LV L N +VLP
Sbjct: 190 SLIKLASLIEVSAKKATQELNLQHRLMDQLEWLPDSLGKLSSLVRLDLSENC---IMVLP 246
Query: 468 DMIGG 454
IGG
Sbjct: 247 ATIGG 251
>At1g73930.1 68414.m08562 expressed protein
Length = 623
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/40 (35%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +2
Query: 452 FPPIISGSTNVYPLRFICN-RVVTNVARPLLKSQRVSLST 568
FPP++ G TN++ L+ + N V +V P S RV+ ++
Sbjct: 307 FPPMVLGVTNIFFLKALRNIPHVVSVGTPAPNSNRVAFTS 346
>At1g02640.1 68414.m00214 glycosyl hydrolase family 3 protein
similar to beta-xylosidase GB:Z84377 GI:2102655 from
[Aspergillus niger]
Length = 768
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -1
Query: 280 RYGGVHPKRNSREPSHLVVGSYRPGRFGCLGRVLVRRARAGCPGTAAG 137
++GGV+P S V S+ + +GRV+ ARA G G
Sbjct: 104 KFGGVYPAATSFPQVITTVASFNASLWESIGRVVSNEARAMYNGGVGG 151
>At5g63810.1 68418.m08008 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase GI:7939621 from
[Lycopersicon esculentum]; contains Pfam profile
PF01301: Glycosyl hydrolases family 35
Length = 741
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 624 LGRTWQRLSRKTQPRDQDGDQC 689
+GR W R++RK P D+ +C
Sbjct: 660 IGRYWPRIARKNSPNDECVKEC 681
>At5g56040.1 68418.m06992 leucine-rich repeat protein kinase,
putative contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 953
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 410 HLTSNSLLGDSL*PF-PPIISGSTNVYPLRFICNRVVTNV 526
+LT LL + L F PP I TN+Y LR NR+ N+
Sbjct: 434 NLTKLLLLSNYLSGFIPPDIGNCTNLYRLRLNGNRLAGNI 473
>At3g23600.1 68416.m02968 dienelactone hydrolase family protein
similar to SP|Q9ZT66 Endo-1,3;1,4-beta-D-glucanase
precursor (EC 3.2.1.-) {Zea mays}; contains Pfam
profile: PF01738 Dienelactone hydrolase family
Length = 239
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -2
Query: 492 NGYTLVLPDMIGGNGYNESPSKELLVRWLQ 403
+G+ +V+PD GG+ YN S + W++
Sbjct: 66 SGFYVVVPDYFGGDPYNPSNQDRPIPVWIK 95
>At2g33540.1 68415.m04111 CTD phosphatase-like protein 3 (CPL3)
identical to CTD phosphatase-like 3 (CPL3) [Arabidopsis
thaliana] GI:22212705; contains Pfam profile PF03031:
NLI interacting factor
Length = 1241
Score = 27.5 bits (58), Expect = 9.9
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 4/65 (6%)
Frame = +1
Query: 73 KLPGDAVPPGAARQIHVPGHGALLQYRGSQHALS*QELVPNSQSVLVG--RIQPPDGR-- 240
+LPG +V PG + + +P AL + L Q+ N+ + G R++P D R
Sbjct: 689 QLPGSSVQPGVSTPLSIPASNALAANSLNSGVL--QDSSQNAPAAESGSIRMKPRDPRRI 746
Query: 241 VHGSS 255
+HGS+
Sbjct: 747 LHGST 751
>At1g53300.1 68414.m06041 thioredoxin family protein contains Pfam
profiles PF00085: Thioredoxin, PF00515: TPR Domain;
similar to tetratricopeptide repeat protein 2
(GI:7248701) [Drosophila melanogaster]; similar to DnaJ
homolog subfamily C member 7 (Tetratricopeptide repeat
protein 2) (TPR repeat protein 2) (Swiss-Prot:Q99615)
[Homo sapiens]
Length = 699
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 80 PVTPSRQEPRGRYTSRDTAPCCSTGAASTRS 172
PV+P R +PRG T+ T S+ ++S+ S
Sbjct: 40 PVSPLRSQPRGLTTTTTTTTTSSSSSSSSGS 70
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,628,486
Number of Sequences: 28952
Number of extensions: 446533
Number of successful extensions: 1251
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1247
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1633819784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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