BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV11h17f (609 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPAC8E11.01c ||SPAC959.01|beta-fructofuranosidase|Schizosaccharo... 27 2.1 SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces p... 27 2.8 SPAC20G8.02 |||phospholipase|Schizosaccharomyces pombe|chr 1|||M... 26 5.0 SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyc... 26 5.0 SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 25 6.5 SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 25 6.5 SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr 2|||M... 25 6.5 SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 6.5 SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 25 6.5 >SPAC8E11.01c ||SPAC959.01|beta-fructofuranosidase|Schizosaccharomyces pombe|chr 1|||Manual Length = 508 Score = 27.1 bits (57), Expect = 2.1 Identities = 10/36 (27%), Positives = 22/36 (61%) Frame = +2 Query: 326 FNGTVVLNKSNSTGRFKTATCKNTQSYPKRKTIPLY 433 F+G+ V++K+NS+G F++ P+ + + +Y Sbjct: 75 FSGSAVIDKTNSSGFFESGFFSRKSVDPEERIVLIY 110 >SPBP8B7.29 |||para-aminobenzoate synthase |Schizosaccharomyces pombe|chr 2|||Manual Length = 718 Score = 26.6 bits (56), Expect = 2.8 Identities = 12/39 (30%), Positives = 19/39 (48%) Frame = +1 Query: 262 ISIHWDGPADRVFEDCFNFGSLQWYGGPEQKQQYWPIQN 378 I +HWD + ++ED F ++ GP +Y I N Sbjct: 37 IVVHWDKMSPDLWEDILQFDAIVVGPGPGHPAEYSSILN 75 >SPAC20G8.02 |||phospholipase|Schizosaccharomyces pombe|chr 1|||Manual Length = 757 Score = 25.8 bits (54), Expect = 5.0 Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 1/83 (1%) Frame = +1 Query: 202 DEEVIFDINTAYDEESGGYRISIHWDGPADRVFEDCFNFG-SLQWYGGPEQKQQYWPIQN 378 +E+ ++ +N E S I+WDGP R+ + F + Y E Sbjct: 153 NEDYLYSVNVVSRELS-----PIYWDGPVYRILRGTWFFSRGDKLYPCEENLATQVEEGY 207 Query: 379 SNLQKYSIISKEEDNSAVSERYW 447 N Y S E+D++A + W Sbjct: 208 LNSCPYREFSNEKDSAAAQSKTW 230 >SPBC336.03 |efc25||exchange factor Cdc25p-like|Schizosaccharomyces pombe|chr 2|||Manual Length = 987 Score = 25.8 bits (54), Expect = 5.0 Identities = 15/42 (35%), Positives = 23/42 (54%) Frame = +2 Query: 197 LMMRR*SSISTQPTMKSPVATALAYIGMDLRTEFLKTASTLV 322 LMM + ST PTM + +A A + ++ +FLK + LV Sbjct: 472 LMMEHSNDFSTMPTMIASIAVAFQTLFENV-CDFLKVRAALV 512 >SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual Length = 4717 Score = 25.4 bits (53), Expect = 6.5 Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 5/91 (5%) Frame = +1 Query: 184 RRVASDDEEVIFDINTAYDEESGGYRISIHWDGPADRVFEDCFNFGSLQWYGGPEQKQQY 363 R + SD V D + +E S + D + + ED N + + + P ++ Sbjct: 3954 RELESDMNGVTKDSVVSENENSDSEEENQDLDEEVNDIPEDLSNSLNEKLWDEPNEEDLL 4013 Query: 364 WPIQNSNLQKYS-----IISKEEDNSAVSER 441 Q SN Q + ++SKE+DN A+ ++ Sbjct: 4014 ETEQKSNEQSAANNESDLVSKEDDNKALEDK 4044 >SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9|Schizosaccharomyces pombe|chr 1|||Manual Length = 1223 Score = 25.4 bits (53), Expect = 6.5 Identities = 10/26 (38%), Positives = 16/26 (61%), Gaps = 2/26 (7%) Frame = +2 Query: 65 SALYQKHPYNATYWW--KNMKTEDFF 136 S+++QK+ Y YW ++ TED F Sbjct: 526 SSIFQKYNYGGKYWCPSPSLSTEDLF 551 >SPBC29A3.06 |||CGI-48 family|Schizosaccharomyces pombe|chr 2|||Manual Length = 556 Score = 25.4 bits (53), Expect = 6.5 Identities = 11/45 (24%), Positives = 26/45 (57%), Gaps = 1/45 (2%) Frame = +1 Query: 349 QKQQY-WPIQNSNLQKYSIISKEEDNSAVSERYWLNSAGQYFYVQ 480 +K Y W ++++ +QK S + +E+ ER+ ++ G+Y ++ Sbjct: 282 RKYMYIWDLESAQVQKVSRMYGQENFQPSMERFHVDPTGKYIALE 326 >SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosaccharomyces pombe|chr 1|||Manual Length = 1087 Score = 25.4 bits (53), Expect = 6.5 Identities = 17/60 (28%), Positives = 27/60 (45%) Frame = +1 Query: 313 NFGSLQWYGGPEQKQQYWPIQNSNLQKYSIISKEEDNSAVSERYWLNSAGQYFYVQPEAP 492 +FG+ Y K W QN+ +IS +D S+V + + S+G + Y AP Sbjct: 181 SFGTSLSYYNRSSKPSDWNQQNNGGHLSGVISITQDVSSVPLQSSVFSSGNHAYHASMAP 240 >SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe|chr 1|||Manual Length = 488 Score = 25.4 bits (53), Expect = 6.5 Identities = 13/47 (27%), Positives = 20/47 (42%) Frame = +2 Query: 347 NKSNSTGRFKTATCKNTQSYPKRKTIPLYRNATG*TRPANTSTCNPK 487 N S + F T T K +P PL++ A ++ C+PK Sbjct: 6 NSSTISPTFSTPTKKRNLVFPNSPITPLHQQALLGRNGRSSKRCSPK 52 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,549,464 Number of Sequences: 5004 Number of extensions: 52016 Number of successful extensions: 155 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 153 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 155 length of database: 2,362,478 effective HSP length: 69 effective length of database: 2,017,202 effective search space used: 268287866 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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