BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV11h17f (609 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BT023924-1|ABB36428.1| 657|Drosophila melanogaster RE74917p pro... 92 6e-19 AE014297-3790|AAF56462.1| 657|Drosophila melanogaster CG11909-P... 92 6e-19 BT003459-1|AAO39462.1| 925|Drosophila melanogaster RH30917p pro... 32 0.53 AE014298-780|AAF46066.2| 725|Drosophila melanogaster CG33080-PB... 32 0.53 AE014298-779|AAF46068.2| 925|Drosophila melanogaster CG33080-PA... 32 0.53 >BT023924-1|ABB36428.1| 657|Drosophila melanogaster RE74917p protein. Length = 657 Score = 91.9 bits (218), Expect = 6e-19 Identities = 40/95 (42%), Positives = 52/95 (54%), Gaps = 1/95 (1%) Frame = +1 Query: 319 GSLQWYGGPEQKQQYWPIQNSNLQKYSIISKEEDNSAVSERYWLNSAGQYFYVQPEAPLF 498 GS W+ GPEQKQ YWP++ YS + KE DN V ERYWLN G + YV+ PLF Sbjct: 130 GSTHWFSGPEQKQHYWPVERQRHSNYSYLPKELDNFGVGERYWLNGDGVFLYVESNTPLF 189 Query: 499 IDYHNVE-DNHICFIAEVAAPYSSKRTHNSLKYDI 600 ID ++ + +C A A PY + T Y + Sbjct: 190 IDQNSAAYPDQLCLSAISALPYDPRVTSAKFVYHV 224 >AE014297-3790|AAF56462.1| 657|Drosophila melanogaster CG11909-PA protein. Length = 657 Score = 91.9 bits (218), Expect = 6e-19 Identities = 40/95 (42%), Positives = 52/95 (54%), Gaps = 1/95 (1%) Frame = +1 Query: 319 GSLQWYGGPEQKQQYWPIQNSNLQKYSIISKEEDNSAVSERYWLNSAGQYFYVQPEAPLF 498 GS W+ GPEQKQ YWP++ YS + KE DN V ERYWLN G + YV+ PLF Sbjct: 130 GSTHWFSGPEQKQHYWPVERQRHSNYSYLPKELDNFGVGERYWLNGDGVFLYVESNTPLF 189 Query: 499 IDYHNVE-DNHICFIAEVAAPYSSKRTHNSLKYDI 600 ID ++ + +C A A PY + T Y + Sbjct: 190 IDQNSAAYPDQLCLSAISALPYDPRVTSAKFVYHV 224 >BT003459-1|AAO39462.1| 925|Drosophila melanogaster RH30917p protein. Length = 925 Score = 32.3 bits (70), Expect = 0.53 Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 7/108 (6%) Frame = +1 Query: 241 EESGGYRI-SIHWDGPADRVFE-DCFNF--GSLQWYGGPEQKQQYWPIQNSNLQ--KY-S 399 E+ G +R ++ W + DC+ + W+GG K Q W + +N Y S Sbjct: 349 EDKGVFRCYTLQWQALTPGLLPTDCYELKRDNGLWFGGGVTKGQEWSLSYANFDFAPYAS 408 Query: 400 IISKEEDNSAVSERYWLNSAGQYFYVQPEAPLFIDYHNVEDNHICFIA 543 SK +RY++NS G V + PL + + E N C A Sbjct: 409 GDSKIHQFGNGVKRYFINSIGVAMQVSEKTPLQLGVNRTE-NRFCLRA 455 >AE014298-780|AAF46066.2| 725|Drosophila melanogaster CG33080-PB, isoform B protein. Length = 725 Score = 32.3 bits (70), Expect = 0.53 Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 7/108 (6%) Frame = +1 Query: 241 EESGGYRI-SIHWDGPADRVFE-DCFNF--GSLQWYGGPEQKQQYWPIQNSNLQ--KY-S 399 E+ G +R ++ W + DC+ + W+GG K Q W + +N Y S Sbjct: 149 EDKGVFRCYTLQWQALTPGLLPTDCYELKRDNGLWFGGGVTKGQEWSLSYANFDFAPYAS 208 Query: 400 IISKEEDNSAVSERYWLNSAGQYFYVQPEAPLFIDYHNVEDNHICFIA 543 SK +RY++NS G V + PL + + E N C A Sbjct: 209 GDSKIHQFGNGVKRYFINSIGVAMQVSEKTPLQLGVNRTE-NRFCLRA 255 >AE014298-779|AAF46068.2| 925|Drosophila melanogaster CG33080-PA, isoform A protein. Length = 925 Score = 32.3 bits (70), Expect = 0.53 Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 7/108 (6%) Frame = +1 Query: 241 EESGGYRI-SIHWDGPADRVFE-DCFNF--GSLQWYGGPEQKQQYWPIQNSNLQ--KY-S 399 E+ G +R ++ W + DC+ + W+GG K Q W + +N Y S Sbjct: 349 EDKGVFRCYTLQWQALTPGLLPTDCYELKRDNGLWFGGGVTKGQEWSLSYANFDFAPYAS 408 Query: 400 IISKEEDNSAVSERYWLNSAGQYFYVQPEAPLFIDYHNVEDNHICFIA 543 SK +RY++NS G V + PL + + E N C A Sbjct: 409 GDSKIHQFGNGVKRYFINSIGVAMQVSEKTPLQLGVNRTE-NRFCLRA 455 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 28,769,461 Number of Sequences: 53049 Number of extensions: 619832 Number of successful extensions: 1934 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1860 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1931 length of database: 24,988,368 effective HSP length: 81 effective length of database: 20,691,399 effective search space used: 2503659279 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -