Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11h13r
         (692 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075202-1|AAL68070.1|  117|Drosophila melanogaster AT14009p pro...    82   6e-16
AF143200-1|AAD32690.1|  117|Drosophila melanogaster vacuolar pro...    82   6e-16
AE014297-2689|AAF55686.1|  117|Drosophila melanogaster CG6213-PA...    82   6e-16

>AY075202-1|AAL68070.1|  117|Drosophila melanogaster AT14009p
           protein.
          Length = 117

 Score = 82.2 bits (194), Expect = 6e-16
 Identities = 42/102 (41%), Positives = 60/102 (58%)
 Frame = -2

Query: 691 AAEKRAAEKVSXXXXXXXXXXXXXXXXXQDEVXXXXXXXXXXXXXXEAKHMGTREGVAAK 512
           AAEK+AAEKV+                  +E+              EAKHMG+REGVAAK
Sbjct: 13  AAEKKAAEKVAEARKRKARRLKQAKDEATEEIEKFRQERERAFKEFEAKHMGSREGVAAK 72

Query: 511 IDAETKVKIEEMNKMVQTQKEAVIKDVLNLVYDIKPELHINY 386
           IDA+ +VK+ +M++ +QT+K+  I ++L  VY+I PE+H NY
Sbjct: 73  IDADIRVKLADMDRAIQTRKDPFILEILQYVYNISPEVHKNY 114


>AF143200-1|AAD32690.1|  117|Drosophila melanogaster vacuolar
           proton-motive ATPasesubunit G VHA13 protein.
          Length = 117

 Score = 82.2 bits (194), Expect = 6e-16
 Identities = 42/102 (41%), Positives = 60/102 (58%)
 Frame = -2

Query: 691 AAEKRAAEKVSXXXXXXXXXXXXXXXXXQDEVXXXXXXXXXXXXXXEAKHMGTREGVAAK 512
           AAEK+AAEKV+                  +E+              EAKHMG+REGVAAK
Sbjct: 13  AAEKKAAEKVAEARKRKARRLKQAKDEATEEIEKFRQERERAFKEFEAKHMGSREGVAAK 72

Query: 511 IDAETKVKIEEMNKMVQTQKEAVIKDVLNLVYDIKPELHINY 386
           IDA+ +VK+ +M++ +QT+K+  I ++L  VY+I PE+H NY
Sbjct: 73  IDADIRVKLADMDRAIQTRKDPFILEILQYVYNISPEVHKNY 114


>AE014297-2689|AAF55686.1|  117|Drosophila melanogaster CG6213-PA
           protein.
          Length = 117

 Score = 82.2 bits (194), Expect = 6e-16
 Identities = 42/102 (41%), Positives = 60/102 (58%)
 Frame = -2

Query: 691 AAEKRAAEKVSXXXXXXXXXXXXXXXXXQDEVXXXXXXXXXXXXXXEAKHMGTREGVAAK 512
           AAEK+AAEKV+                  +E+              EAKHMG+REGVAAK
Sbjct: 13  AAEKKAAEKVAEARKRKARRLKQAKDEATEEIEKFRQERERAFKEFEAKHMGSREGVAAK 72

Query: 511 IDAETKVKIEEMNKMVQTQKEAVIKDVLNLVYDIKPELHINY 386
           IDA+ +VK+ +M++ +QT+K+  I ++L  VY+I PE+H NY
Sbjct: 73  IDADIRVKLADMDRAIQTRKDPFILEILQYVYNISPEVHKNY 114


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,061,558
Number of Sequences: 53049
Number of extensions: 426365
Number of successful extensions: 1185
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1182
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)