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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11h12f
         (338 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces...    37   7e-04
SPAPB17E12.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyce...    35   0.003
SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8 |Schizosacch...    35   0.004
SPBC17A3.10 |pas4||peroxisomal ubiquitin-protein ligase E3 |Schi...    34   0.007
SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ...    33   0.009
SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces p...    30   0.084
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po...    30   0.084
SPBC1734.06 |rhp18||Rad18 homolog Rhp18|Schizosaccharomyces pomb...    30   0.11 
SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces...    30   0.11 
SPBC13E7.02 |cwf24||GCN5-related N acetyltransferase|Schizosacch...    29   0.26 
SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog Rhp16|Schizo...    28   0.34 
SPBC16G5.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ...    27   0.78 
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos...    27   0.78 
SPAC17A5.13 |||GTP cyclohydrolase |Schizosaccharomyces pombe|chr...    26   1.4  
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha...    26   1.8  
SPAC23A1.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces ...    26   1.8  
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa...    25   2.4  
SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces pom...    25   2.4  
SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr 1|||...    25   3.2  
SPAC19A8.10 |rfp1|mug140|ubiquitin-protein ligase E3 Rfp1|Schizo...    25   3.2  
SPCC18B5.08c |||isoleucine-tRNA ligase|Schizosaccharomyces pombe...    25   3.2  
SPCC1840.07c |||phosphoprotein phosphatase |Schizosaccharomyces ...    25   4.2  
SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3 |Sch...    24   5.5  
SPAC343.18 |rfp2||ubiquitin-protein ligase E3 Rfp2|Schizosacchar...    24   5.5  
SPAC1002.14 |itt1||ubiquitin-protein ligase E3 |Schizosaccharomy...    24   7.3  
SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|ch...    24   7.3  
SPBC902.03 |||Spo7 homolog|Schizosaccharomyces pombe|chr 2|||Manual    24   7.3  
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo...    23   9.6  
SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces pomb...    23   9.6  
SPBC32H8.08c |||mannosyltransferase complex subunit |Schizosacch...    23   9.6  

>SPAC6B12.07c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 456

 Score = 37.1 bits (82), Expect = 7e-04
 Identities = 11/28 (39%), Positives = 17/28 (60%)
 Frame = +1

Query: 193 EYDCAVCLQKCQHPTKLSCGHVFCFLCV 276
           +++CA+C      P +L C HVFC  C+
Sbjct: 357 DFECAICSNVAYKPVRLGCSHVFCLHCL 384


>SPAPB17E12.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 311

 Score = 35.1 bits (77), Expect = 0.003
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 202 CAVCLQKCQHPTKLSCGHVFCFLCVKV 282
           C +C +K ++P  LS G VFC+ C++V
Sbjct: 257 CKICGEKIKNPAVLSTGFVFCYPCIQV 283


>SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 269

 Score = 34.7 bits (76), Expect = 0.004
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 193 EYDCAVCLQKCQHPTKLSCGHVFCFLCV 276
           +Y C +CL   ++ +   CGH+FC  C+
Sbjct: 203 DYKCVICLDSPENLSCTPCGHIFCNFCI 230


>SPBC17A3.10 |pas4||peroxisomal ubiquitin-protein ligase E3
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 306

 Score = 33.9 bits (74), Expect = 0.007
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +1

Query: 202 CAVCLQKCQHPTKLSCGHVFCFLCV 276
           C++C++    P    CGH+FC+ C+
Sbjct: 256 CSLCMEFIHCPAATECGHIFCWSCI 280


>SPCC548.05c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 468

 Score = 33.5 bits (73), Expect = 0.009
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +1

Query: 199 DCAVCLQKCQHPTKLSCGHVFCFLCV 276
           +C +C +  Q P    CGH +C+ C+
Sbjct: 84  ECPICTEALQRPFTTHCGHTYCYECL 109


>SPBP8B7.23 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 673

 Score = 30.3 bits (65), Expect = 0.084
 Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +1

Query: 202 CAVCLQKCQHPTKLS-CGHVFCFLCV 276
           C  CL++     ++S CGHV+CF C+
Sbjct: 214 CPFCLEEKPVAARMSRCGHVYCFSCL 239


>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 897

 Score = 30.3 bits (65), Expect = 0.084
 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +1

Query: 193 EYDCAVCLQKCQHPT-KLSCGHVFCFLCVKV 282
           +++C+VCL  C  P   + CGH  C  C+ +
Sbjct: 603 DFNCSVCLDPCLAPVFIIPCGHFTCQECMSM 633


>SPBC1734.06 |rhp18||Rad18 homolog Rhp18|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 387

 Score = 29.9 bits (64), Expect = 0.11
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +1

Query: 202 CAVCLQKCQHPTKLSCGHVFCFLCVK 279
           C +C +  + P   SC H FC  C++
Sbjct: 29  CLICHEYFRAPLITSCSHTFCSFCIR 54


>SPBC14F5.10c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 486

 Score = 29.9 bits (64), Expect = 0.11
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 193 EYDCAVCLQKCQHPTKLSCGHVFCFLCV 276
           E +C +C      P    CGH FC  C+
Sbjct: 166 ELECQICFGMLYDPVVSPCGHTFCGPCL 193


>SPBC13E7.02 |cwf24||GCN5-related N
           acetyltransferase|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 533

 Score = 28.7 bits (61), Expect = 0.26
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +1

Query: 187 NMEYDCAVCLQKCQHPTKLSCGHVFCFLC 273
           ++ + C +C +  + P   +CGH FC  C
Sbjct: 249 DIPFVCLICKKDYRSPIATTCGHHFCEQC 277


>SPCC330.01c |rhp16|SPCC613.13c, rad16|Rad16 homolog
           Rhp16|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 963

 Score = 28.3 bits (60), Expect = 0.34
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +1

Query: 202 CAVCLQKCQHPTKLSCGHVFCFLCV 276
           C +C +  Q   +  C H FC LCV
Sbjct: 711 CKICDEVAQDAIESRCHHTFCRLCV 735


>SPBC16G5.03 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 268

 Score = 27.1 bits (57), Expect = 0.78
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
 Frame = +1

Query: 181 SHNMEYDCAVCLQKCQHPTKLS-CGH-VFCFLCV 276
           S  +  DC +CLQK     +LS CGH  F + C+
Sbjct: 14  SRYLRRDCVICLQKDGLRAQLSPCGHDQFDYSCI 47


>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
           Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 872

 Score = 27.1 bits (57), Expect = 0.78
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 310 YLKKITKYFKPSHKENRKHDR 248
           + K  +KY+ PSHK++ K  R
Sbjct: 627 HAKSFSKYYSPSHKDSNKTSR 647


>SPAC17A5.13 |||GTP cyclohydrolase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 235

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 6/23 (26%), Positives = 17/23 (73%)
 Frame = -2

Query: 256 HDRRIVLLDVDIFASKQHNHIPY 188
           H+  +++ D+D+F+  +H+ +P+
Sbjct: 110 HEEMVIVRDIDVFSLCEHHLVPF 132


>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
           homolog|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 338

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -1

Query: 338 FFFYRAIFRLFKKNN 294
           F FY  I RLF KNN
Sbjct: 319 FVFYEGIIRLFNKNN 333


>SPAC23A1.07 |||ubiquitin-protein ligase E3 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 251

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 9/31 (29%), Positives = 15/31 (48%), Gaps = 6/31 (19%)
 Frame = +1

Query: 202 CAVCLQKCQH------PTKLSCGHVFCFLCV 276
           C +C+Q+         P    CGH +C+ C+
Sbjct: 192 CMMCVQRGDERVAITTPYTTDCGHTYCYACI 222


>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
           Brl2|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 680

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 9/27 (33%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = +1

Query: 202 CAVC-LQKCQHPTKLSCGHVFCFLCVK 279
           C+VC  ++ +      CGH FC+ C++
Sbjct: 627 CSVCNFERWKDRIISLCGHGFCYQCIQ 653


>SPAC144.05 |||ATP-dependent DNA helicase|Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1375

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 7/26 (26%), Positives = 14/26 (53%)
 Frame = +1

Query: 202  CAVCLQKCQHPTKLSCGHVFCFLCVK 279
            C +C    +     +CGH++C  C++
Sbjct: 1092 CIICRDIIKQGFITTCGHLYCSFCLE 1117


>SPAC328.02 |||Ariadne homolog|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 504

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 9/28 (32%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
 Frame = +1

Query: 202 CAVCLQK---CQHPTKLSCGHVFCFLCV 276
           C+  ++K   C H T   C + FC++C+
Sbjct: 294 CSTTIEKNGGCNHMTCKKCKYEFCWVCL 321


>SPAC19A8.10 |rfp1|mug140|ubiquitin-protein ligase E3
           Rfp1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 254

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +1

Query: 247 CGHVFCFLCVKV 282
           CGHV+C  C KV
Sbjct: 212 CGHVYCGSCAKV 223


>SPCC18B5.08c |||isoleucine-tRNA ligase|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 973

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = -2

Query: 310 YLKKITKYFKPSHKENRKHDRRIVLLDVDIFASKQHNHIPYYVRKLIQ 167
           Y K IT       KEN   +   VLLD   FA+ +  HI + + K+++
Sbjct: 58  YFKSITSDLYEWQKENLNKEDSFVLLDGPPFANGR-LHIGHALNKILK 104


>SPCC1840.07c |||phosphoprotein phosphatase |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 332

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 304 KKITKYFKPSHKENRKHDRRIVLL 233
           +K+ ++F   HK+  KH  R+V L
Sbjct: 111 RKLFRWFNDLHKQAEKHGGRVVRL 134


>SPAC13G6.01c |rad8|SPAC5H10.14c|ubiquitin-protein ligase E3
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1133

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 9/27 (33%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = +1

Query: 199 DCAVCLQK-CQHPTKLSCGHVFCFLCV 276
           +C +C  +  Q+P  L+C H  C  C+
Sbjct: 876 ECPICCNEPIQNPLLLNCKHACCGDCL 902


>SPAC343.18 |rfp2||ubiquitin-protein ligase E3
           Rfp2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 205

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 247 CGHVFCFLCVK 279
           CGH+FC  C K
Sbjct: 167 CGHLFCSTCAK 177


>SPAC1002.14 |itt1||ubiquitin-protein ligase E3 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 435

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
 Frame = +1

Query: 160 KHAVLIFSHNMEYDCAVCLQK-----CQHPTKLSCGHVFCFLCVK 279
           K+A L+     ++ C VC  +     C   T+  CGHV C  C++
Sbjct: 160 KNAKLLEFQIRKFQCNVCFDEFNGTDCFQLTR--CGHVSCQSCLR 202


>SPBC17D11.02c |||synoviolin homolog|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 677

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 232 PTKLSCGHVFCFLCVK 279
           P +L CGH+  F C++
Sbjct: 323 PKRLPCGHILHFHCLR 338


>SPBC902.03 |||Spo7 homolog|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 180

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = -2

Query: 337 FFFTGLYFVYLKKITKYFKPSHKENRKHDRRIVLLDVDIF 218
           F+F+GLY   +   ++Y +  +K  R  + R+V+  V  F
Sbjct: 82  FYFSGLYRTTIVYPSRYVQQVNKAMRFFNIRLVITPVPWF 121


>SPCC18.03 |||shuttle craft like transcriptional
           regulator|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1077

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 208 VCLQKCQHPTKLSCGHVFC 264
           +C + C    KLSCG+ FC
Sbjct: 584 ICFRPCNK--KLSCGNHFC 600


>SPBC2A9.04c |||sir antagonist ortholog |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 741

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 5/35 (14%)
 Frame = +1

Query: 190 MEYDCAVCLQKC-----QHPTKLSCGHVFCFLCVK 279
           M+  C +C         +  TK+ CGH+F   C++
Sbjct: 103 MDLTCPICYDDMNENDEKQATKMPCGHIFGKNCLQ 137


>SPBC32H8.08c |||mannosyltransferase complex subunit
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 438

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 10/22 (45%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
 Frame = -1

Query: 131 LPISKLLKY-VCSFVVFHNFLT 69
           L + KL+K  +C F++FH+F T
Sbjct: 24  LHVWKLIKLLICKFLLFHDFGT 45


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,453,351
Number of Sequences: 5004
Number of extensions: 28950
Number of successful extensions: 83
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 83
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 98026656
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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