Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11h11r
         (767 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    25   0.59 
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   5.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.5  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    21   9.5  

>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 25.4 bits (53), Expect = 0.59
 Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
 Frame = +2

Query: 17  LLDVLSH*RTTKS--RKFYITLLILFGENPLWHIQIIHKCNKKIIVL 151
           + D+L H R TK   R  ++  L  +G+N +  ++IIH   KK+I L
Sbjct: 216 MCDIL-HLRHTKIWLRPDWLFNLTKYGKNQIKLLEIIHGLTKKVIQL 261


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 563 LICFHFIHANIK*NHFFIIR 504
           ++ FHF H   + NH+ ++R
Sbjct: 292 VVIFHFAHPREEFNHWTVMR 311


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -1

Query: 218 YNTNNFLVGSFVEVLYNFFYTNLRQ*FFYYI 126
           YN  N L+    ++  N +Y  LRQ F +++
Sbjct: 214 YNLENKLIYFIEDIGLNTYYFFLRQAFPFWL 244


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 5/13 (38%), Positives = 11/13 (84%)
 Frame = +1

Query: 592 ISKYISVIHPFLT 630
           + +YI++ HPF++
Sbjct: 150 VERYIAICHPFIS 162


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,341
Number of Sequences: 438
Number of extensions: 3929
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)