Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11h11f
         (582 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    27   0.15 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    24   1.1  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    24   1.1  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    22   4.4  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   5.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   5.8  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   5.8  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   5.8  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   7.6  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 26.6 bits (56), Expect = 0.15
 Identities = 11/48 (22%), Positives = 22/48 (45%)
 Frame = +3

Query: 333 WSTIWGVLFKIP*STLASKVLLTKHYTNLVWILKN*KNLRKMLVWEME 476
           W+ +  V F +P   +   + +T+H +   W+      L  +L WE +
Sbjct: 213 WTILQTVFFTVPRVLMYFDIFITEHESKPNWLFFLANFLTNLLFWEFD 260


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 245 TVKDHLVSRWIRTQQYYYENDPKRVYY 325
           TV    V+R  R +QY Y N  ++ YY
Sbjct: 335 TVPTQGVARMSRGRQYNYPNPQQQYYY 361


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 245 TVKDHLVSRWIRTQQYYYENDPKRVYY 325
           TV    V+R  R +QY Y N  ++ YY
Sbjct: 283 TVPTQGVARMSRGRQYNYPNPQQQYYY 309


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +2

Query: 527 LAAYGYGIRYE 559
           LAAYGYG  Y+
Sbjct: 73  LAAYGYGAGYD 83


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/39 (23%), Positives = 18/39 (46%)
 Frame = +2

Query: 134 VENVTEVKKAFNRHVHYTLVKDRNVATPRDYYFALAHTV 250
           +  + E+     RH  ++L     + T RD+  +LA  +
Sbjct: 299 IPQLEEMSNFLKRHTGFSLRPAAGLLTARDFLASLAFRI 337


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = -2

Query: 548 YHIHTQQDLMSP*SLGNKLLSVQDLH 471
           +HI+T +DL +P +    L++    H
Sbjct: 498 FHIYTPEDLFAPNTYNRHLVAPNGDH 523


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 252 KIILSPGGFVLNNTIMKMILRESTICP 332
           ++++SP G VLN T+ K     S I P
Sbjct: 134 RVMMSPPGNVLNLTMPKYEPNPSIIDP 160


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 252 KIILSPGGFVLNNTIMKMILRESTICP 332
           ++++SP G VLN T+ K     S I P
Sbjct: 134 RVMMSPPGNVLNLTMPKYEPNPSIIDP 160


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 7.6
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +2

Query: 98  KRKQISVRGIVAVENVTEVKKAFNR 172
           KRKQ   R       + E++KAF R
Sbjct: 217 KRKQRRSRTTFTAHQLDELEKAFER 241


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,133
Number of Sequences: 336
Number of extensions: 3025
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14517299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)