Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11h11f
         (582 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64844-2|AAO25987.1|  846|Caenorhabditis elegans Hypothetical pr...   245   2e-65
U64844-1|AAK72092.1|  882|Caenorhabditis elegans Hypothetical pr...   245   2e-65
AF067617-4|AAC17557.1|  381|Caenorhabditis elegans Hypothetical ...    36   0.028
Z73102-3|CAA97409.1|  337|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U00032-12|AAA50629.1|  482|Caenorhabditis elegans Hypothetical p...    28   5.6  
AC006644-6|AAZ91358.1|  958|Caenorhabditis elegans Hypothetical ...    27   7.4  
U23178-1|AAK68301.1| 1280|Caenorhabditis elegans Guanylyl cyclas...    27   9.7  
AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical...    27   9.7  
AF039046-3|ABP57815.1|   51|Caenorhabditis elegans Caenacin (cae...    27   9.7  
AC024776-6|AAK68464.2|   96|Caenorhabditis elegans Hypothetical ...    27   9.7  

>U64844-2|AAO25987.1|  846|Caenorhabditis elegans Hypothetical
           protein T22F3.3b protein.
          Length = 846

 Score =  245 bits (599), Expect = 2e-65
 Identities = 112/166 (67%), Positives = 131/166 (78%)
 Frame = +2

Query: 80  VQTDAEKRKQISVRGIVAVENVTEVKKAFNRHVHYTLVKDRNVATPRDYYFALAHTVKDH 259
           +  D ++RKQISVRGI  VENV+ +KKAFNRH+H++++KDRNVAT RDYYFALA+TV+DH
Sbjct: 2   ITNDHDRRKQISVRGIAQVENVSNIKKAFNRHLHFSIIKDRNVATDRDYYFALANTVRDH 61

Query: 260 LVSRWIRTQQYYYENDPKRVYYLSLEYYMGRSLQNTMINLGIQGTVDEALYQXXXXXXXX 439
           LVSRWIRTQQ+YY+ DPKRVYYLSLE+YMGR+L NTM+NLGIQ TVDEALYQ        
Sbjct: 62  LVSRWIRTQQHYYDKDPKRVYYLSLEFYMGRTLSNTMMNLGIQATVDEALYQLGLDIEEL 121

Query: 440 XXXXXXXXXXXXXXXRLAACFLDSMATLGLAAYGYGIRYEYGIFAQ 577
                          RLAACFLDSMATLG+ AYGYG+RYEYGIF Q
Sbjct: 122 QEIEEDAGLGNGGLGRLAACFLDSMATLGIPAYGYGLRYEYGIFKQ 167


>U64844-1|AAK72092.1|  882|Caenorhabditis elegans Hypothetical
           protein T22F3.3a protein.
          Length = 882

 Score =  245 bits (599), Expect = 2e-65
 Identities = 112/166 (67%), Positives = 131/166 (78%)
 Frame = +2

Query: 80  VQTDAEKRKQISVRGIVAVENVTEVKKAFNRHVHYTLVKDRNVATPRDYYFALAHTVKDH 259
           +  D ++RKQISVRGI  VENV+ +KKAFNRH+H++++KDRNVAT RDYYFALA+TV+DH
Sbjct: 38  ITNDHDRRKQISVRGIAQVENVSNIKKAFNRHLHFSIIKDRNVATDRDYYFALANTVRDH 97

Query: 260 LVSRWIRTQQYYYENDPKRVYYLSLEYYMGRSLQNTMINLGIQGTVDEALYQXXXXXXXX 439
           LVSRWIRTQQ+YY+ DPKRVYYLSLE+YMGR+L NTM+NLGIQ TVDEALYQ        
Sbjct: 98  LVSRWIRTQQHYYDKDPKRVYYLSLEFYMGRTLSNTMMNLGIQATVDEALYQLGLDIEEL 157

Query: 440 XXXXXXXXXXXXXXXRLAACFLDSMATLGLAAYGYGIRYEYGIFAQ 577
                          RLAACFLDSMATLG+ AYGYG+RYEYGIF Q
Sbjct: 158 QEIEEDAGLGNGGLGRLAACFLDSMATLGIPAYGYGLRYEYGIFKQ 203


>AF067617-4|AAC17557.1|  381|Caenorhabditis elegans Hypothetical
           protein T04D1.2 protein.
          Length = 381

 Score = 35.5 bits (78), Expect = 0.028
 Identities = 22/82 (26%), Positives = 41/82 (50%)
 Frame = +2

Query: 95  EKRKQISVRGIVAVENVTEVKKAFNRHVHYTLVKDRNVATPRDYYFALAHTVKDHLVSRW 274
           E  K  SVR +V +EN+++ ++ ++     T V  R + TP   Y+ +   +KD+   + 
Sbjct: 96  EHLKTYSVRQLVVIENISDYQEFYDMMWSQTTVSYRFLTTPPVTYW-IRSVIKDYPNMKL 154

Query: 275 IRTQQYYYENDPKRVYYLSLEY 340
                  YEN  +  +YL++ Y
Sbjct: 155 NGISYMSYENKKELEHYLNVLY 176


>Z73102-3|CAA97409.1|  337|Caenorhabditis elegans Hypothetical
           protein B0035.2 protein.
          Length = 337

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 19/87 (21%), Positives = 37/87 (42%)
 Frame = +2

Query: 137 ENVTEVKKAFNRHVHYTLVKDRNVATPRDYYFALAHTVKDHLVSRWIRTQQYYYENDPKR 316
           + + +  +A  R  H   VK++      +  F +  T  + L     +T   YY + P +
Sbjct: 51  QKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLDHPDQ 110

Query: 317 VYYLSLEYYMGRSLQNTMINLGIQGTV 397
            +Y   +YY  R+     + + I GT+
Sbjct: 111 RFYNYYQYYRLRAAPKVDLRIVIVGTI 137


>U00032-12|AAA50629.1|  482|Caenorhabditis elegans Hypothetical
           protein F37A4.1 protein.
          Length = 482

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = +2

Query: 89  DAEKRKQISVRGIVAVENVTEVKKAFNRHVHYTLVKDRNVATPRD-YYFALAH 244
           D    +++   G+   E  T+ K+ F+   HY +  D N  TP D  YF + H
Sbjct: 425 DMTPTERLMHSGVSLREESTQRKRLFDACNHYLIDFDANHVTPLDPQYFNIPH 477


>AC006644-6|AAZ91358.1|  958|Caenorhabditis elegans Hypothetical
           protein F55A3.1 protein.
          Length = 958

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 16/59 (27%), Positives = 28/59 (47%)
 Frame = -2

Query: 581 FFEQIYHIRTLYHIHTQQDLMSP*SLGNKLLSVQDLHFPDQHLPQVLLILQYPDQVGIM 405
           F E ++ + +L  + T      P  +GN  LSV  LH    + P ++ +L    Q+ I+
Sbjct: 415 FLEHVFWVISLNTLFTATFAYFPFRIGNWFLSVIGLHGKISYFPSIVAMLLGYIQIAII 473


>U23178-1|AAK68301.1| 1280|Caenorhabditis elegans Guanylyl cyclase
           protein 12 protein.
          Length = 1280

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = -3

Query: 205 ISIFH*SVMDMTIERLLYFSHIFDSNNSSDRYLFTLFRVSL 83
           ++++H          + Y  H +D+NNSSDR +    R +L
Sbjct: 370 LNVYHSMNNHFLRNTMTYLHHSWDANNSSDRKMLDYARSAL 410


>AL110478-11|CAB54347.2| 1435|Caenorhabditis elegans Hypothetical
            protein Y26D4A.9 protein.
          Length = 1435

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +3

Query: 327  CPWSTIWGVLFKIP*STLASKVLLTKHYTNLVWILKN*KNLRKM 458
            CP + + G   K+  S L++K     HY NL  +LKN   L+K+
Sbjct: 1090 CPENKLVGTTNKLI-SDLSNKTKYVIHYKNLKQVLKNGMVLKKI 1132


>AF039046-3|ABP57815.1|   51|Caenorhabditis elegans Caenacin
           (caenorhabditis bacteriocin)protein 11 protein.
          Length = 51

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +2

Query: 485 RLAACFLDSMATLGLAAYGYGIRYEYG 565
           RL    L ++  L  A YGYG  Y YG
Sbjct: 3   RLIILLLVALLALSSAQYGYGYNYGYG 29


>AC024776-6|AAK68464.2|   96|Caenorhabditis elegans Hypothetical
           protein Y41D4B.14 protein.
          Length = 96

 Score = 27.1 bits (57), Expect = 9.7
 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 5/53 (9%)
 Frame = +2

Query: 128 VAVENVTEVKKAFNRHVHYT-----LVKDRNVATPRDYYFALAHTVKDHLVSR 271
           V++EN  E +K+    V+Y      + KD+++   RD   A+ H++++ L  R
Sbjct: 42  VSIENKMEEEKSGVPAVNYAKKEPGMTKDQHIIRVRDSVEAMLHSIEERLTGR 94


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,787,548
Number of Sequences: 27780
Number of extensions: 266062
Number of successful extensions: 729
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 705
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)