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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11h10r
         (716 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_20442| Best HMM Match : Chitin_bind_3 (HMM E-Value=7.4e-05)        155   3e-38
SB_28577| Best HMM Match : Chitin_bind_3 (HMM E-Value=0.00012)        153   1e-37
SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06)         129   2e-30
SB_28578| Best HMM Match : No HMM Matches (HMM E-Value=.)              67   2e-11
SB_6097| Best HMM Match : Chitin_bind_3 (HMM E-Value=0.7)              58   7e-09
SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)              37   0.014
SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10)                   29   3.8  
SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40)                28   6.6  
SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.6  
SB_54839| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   6.6  
SB_41239| Best HMM Match : 7tm_6 (HMM E-Value=0.091)                   28   8.7  
SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046)            28   8.7  
SB_30331| Best HMM Match : Amidase (HMM E-Value=0)                     28   8.7  

>SB_20442| Best HMM Match : Chitin_bind_3 (HMM E-Value=7.4e-05)
          Length = 288

 Score =  155 bits (376), Expect = 3e-38
 Identities = 81/209 (38%), Positives = 115/209 (55%), Gaps = 3/209 (1%)
 Frame = -2

Query: 709 MQLSYFLAFVALLATVRAHGRVVEPASRASXWRAGFGT-RINYDDDGINCGGFHRQWETN 533
           M+L   L   +L A    HG +  PA+R    + GF      Y  D  NCGG   QW+ N
Sbjct: 1   MKLFSLLLIASLTALALGHGYIKNPAARNVCRKYGFDKCPREYTPDEKNCGGIGTQWDKN 60

Query: 532 NGKCGICGDPYDDSPPRPHEL-GGAYGNGVIVAKYSSGQVIDTTVEITAYHRGYWEFKLC 356
            GKCG+CGD YD+  P+P  +  G +  G I   Y  GQ+ +  + IT  H+G+ EF++ 
Sbjct: 61  GGKCGVCGDRYDN--PKPTLVYPGKFATGTITGIYKEGQLFELELHITVSHKGWSEFRVG 118

Query: 355 TDPSNNEQECFEKYLLELEDGGTKY-YPKSSGRYDVRYRLPAGVSCEHCVLQWTYTAGNN 179
              +    +    +LL+LEDG T++ +P   G Y +  +LPAG+ C HCVLQW +  GN+
Sbjct: 119 DIGAPPITQAKLNHLLKLEDGTTRWMHPGKIGLYKIMLQLPAGLKCRHCVLQWWWRTGNS 178

Query: 178 WGVCPNGTGALGCGNQETFWACTDVSIKP 92
           WG   +G G +G G QE F  C D++IKP
Sbjct: 179 WGCDSDGCG-MGHGPQEHFVNCADITIKP 206


>SB_28577| Best HMM Match : Chitin_bind_3 (HMM E-Value=0.00012)
          Length = 281

 Score =  153 bits (372), Expect = 1e-37
 Identities = 81/209 (38%), Positives = 117/209 (55%), Gaps = 3/209 (1%)
 Frame = -2

Query: 709 MQLSYFLAFVALLATVRAHGRVVEPASRASXWRAGFGTRI-NYDDDGINCGGFHRQWETN 533
           M+L   L   +L A    HG +  PA+R +  + GF   I  +  D  NCGG   QW+ N
Sbjct: 1   MKLFSLLLIASLTALALGHGYIRNPAARNACKQYGFEECIIEWTMDEKNCGGLSAQWKDN 60

Query: 532 NGKCGICGDPYDDSPPRPHEL-GGAYGNGVIVAKYSSGQVIDTTVEITAYHRGYWEFKLC 356
            GKCG+CGD YD+  P+P  +  G +  G I   Y  GQ+ +  + IT  H+G+ EF++ 
Sbjct: 61  GGKCGVCGDRYDN--PKPTLVYPGKFATGTITGIYKEGQLFELQLNITVSHKGWSEFRVG 118

Query: 355 TDPSNNEQECFEKYLLELEDGGTKY-YPKSSGRYDVRYRLPAGVSCEHCVLQWTYTAGNN 179
              +    +    +LL+LEDG T++ +P  +G Y +  +LPAG+ C HCVLQW +  GN+
Sbjct: 119 DIGTPPITQAKLNHLLKLEDGTTRWMHPGKAGLYKIMLQLPAGLKCRHCVLQWWWRTGNS 178

Query: 178 WGVCPNGTGALGCGNQETFWACTDVSIKP 92
           WG   +G G LG G QE F  C D++I P
Sbjct: 179 WGCDSDGCG-LGHGPQEHFVNCADITIIP 206


>SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06)
          Length = 295

 Score =  129 bits (312), Expect = 2e-30
 Identities = 72/194 (37%), Positives = 103/194 (53%), Gaps = 3/194 (1%)
 Frame = -2

Query: 664 VRAHGRVVEPASRASXWRAGFGTRI-NYDDDGINCGGFHRQWETNNGKCGICGDPYDDSP 488
           V  HG ++EPA+R + +       + NY+ +   CGG   Q   N  KCG+CGD Y +  
Sbjct: 19  VHGHGYMIEPAARNACYMKFPNQCVRNYNANEQFCGGRATQI-ANGNKCGVCGDSYSNPS 77

Query: 487 PRPHELGGAYGNGVIVAKYSSGQVIDTTVEITAYHRGYWEFKLCTDPSNNEQECFEKYLL 308
           P PH   G Y  G I   Y+ GQ+I   + ITA H+G++E+++    +    +     LL
Sbjct: 78  P-PHVYPGKYATGFITQTYTQGQIISVKIHITANHQGWFEYRIGKIGTPPITQSKLTQLL 136

Query: 307 ELEDGGTKYYPKSSG-RYDVR-YRLPAGVSCEHCVLQWTYTAGNNWGVCPNGTGALGCGN 134
              +G T++    SG  Y+ +   LPA ++C+HCV+QW +  GN WG C NG    G G 
Sbjct: 137 ASAEGQTRFPLTGSGSSYETQTLVLPADLTCDHCVIQWWWKVGNTWG-CENGKCGNGLGP 195

Query: 133 QETFWACTDVSIKP 92
           QETF  C DV I P
Sbjct: 196 QETFVNCADVKILP 209


>SB_28578| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 103

 Score = 66.9 bits (156), Expect = 2e-11
 Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
 Frame = -2

Query: 703 LSYFLAFVALLATVRAHGRVVEPASRASXWRA-GFGTRINYDDDGINCGGFHRQWETNNG 527
           LS+ L   +++  V  HG + EPA+R   +R     T +++  D +NCGGF  Q + N G
Sbjct: 4   LSFTLLVASVVTLVSGHGFIQEPAARQVCYREFPKCTSVHWTPDELNCGGFSTQNDKNGG 63

Query: 526 KCGICGDPYDDSPPRPHELGGAYGNGVIVAKYSSGQ 419
           KCG+CGD Y     +     G +  GVI   Y  GQ
Sbjct: 64  KCGVCGDAY-HLTDKAFVYPGKFALGVITGTYQEGQ 98


>SB_6097| Best HMM Match : Chitin_bind_3 (HMM E-Value=0.7)
          Length = 325

 Score = 58.0 bits (134), Expect = 7e-09
 Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
 Frame = -2

Query: 691 LAFVALLATV---RAHGRV-VEPASRASXWRAGFGTRI-NYDDDGINCGGFHRQWETNNG 527
           LAF  LL  +     HG + + PA          G  + N+  + +NCGGF  QW    G
Sbjct: 5   LAFAVLLCVIPHISGHGYLSIPPARNYCGALKDKGPCVRNWTPNELNCGGFVYQWREAGG 64

Query: 526 KCGICGDPYDDSPPRPHELGGAYGNGVIVAK 434
           KCG+CGDPY  +  + H  GG +  GVI  +
Sbjct: 65  KCGVCGDPYGKT--QRHTEGGEFAKGVITGR 93


>SB_42973| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1864

 Score = 37.1 bits (82), Expect = 0.014
 Identities = 35/116 (30%), Positives = 50/116 (43%), Gaps = 8/116 (6%)
 Frame = -2

Query: 610 AGFGTRINYDDDGINCG-GFHRQWETNNGKCGICGDPYDDSPPRPHELGGAY-GNGVIV- 440
           AGF   I ++ D  + G GF+ +W T +        P    PP P   GGA+ G G  + 
Sbjct: 145 AGF-LWIEFNSDFSDTGTGFYARWRTEDDSGRPLPTPGVTKPPNPQGCGGAFSGQGGTIT 203

Query: 439 -----AKYSSGQVIDTTVEITAYHRGYWEFKLCTDPSNNEQECFEKYLLELEDGGT 287
                +KY   +    T  ITA   G    K  T     +++C   Y LE+ DGG+
Sbjct: 204 SPGYPSKYPKNKKCVWT--ITAQEGGRIHLKFDTFQLEEDRQCRYDY-LEIRDGGS 256


>SB_56900| Best HMM Match : I-set (HMM E-Value=8e-10)
          Length = 968

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = +3

Query: 72  PDTEASTGLIETSVHAQNVS*FPHPRAPVPLGQTPQLLPAVYVHCRTQCSHETP 233
           P T  +T L+   +HA+ +  +  P  P P    P  L   Y+H  T  S  TP
Sbjct: 402 PSTPKATRLVHPHLHAKYIHAYT-PSTPTPTRPVPPRLHTEYIHAYTP-STPTP 453



 Score = 29.1 bits (62), Expect = 3.8
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = +3

Query: 72  PDTEASTGLIETSVHAQNVS*FPHPRAPVPLGQTPQLLPAVYVHCRTQCSHETP 233
           P T  +T L+   +HA+ +  +  P  P P    P  L   Y+H  T  S  TP
Sbjct: 585 PSTPKATRLVHPHLHAKYIHAYT-PSTPTPTRPVPPRLHTEYIHAYTP-STPTP 636


>SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40)
          Length = 1042

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +1

Query: 217 AHTRPPQEADTSRRNDHCSSGNTSCRHLLIPGGISRSIP 333
           A+   PQ+A T   +       TSC+H+ +P G   S+P
Sbjct: 474 AYQGSPQDAVTGAESFSRWWTGTSCKHVTLPAGALASVP 512


>SB_12832| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1169

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 4/54 (7%)
 Frame = -2

Query: 238 PAGVSCEHCVLQWTYTAGNNWGVCPNGTGALG----CGNQETFWACTDVSIKPV 89
           P G +C            + W +CPNGT +LG    C      ++C  + + PV
Sbjct: 280 PKGYACPRNDTDNMIKCPDGWALCPNGTYSLGAQIKCTPCLPGYSCPSIEMGPV 333


>SB_54839| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1409

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
 Frame = -2

Query: 232 GVSCEHCVLQWTYTAGNNWGVCPNGTGALGCGNQETFWA--CTDVSIKPVE 86
           G +CE  V + +     N GVC N  G   C  +  F    C     KP+E
Sbjct: 310 GKNCEQDVNECSVNPCKNGGVCKNEHGGYSCACKAGFTGKNCEQAPSKPLE 360


>SB_41239| Best HMM Match : 7tm_6 (HMM E-Value=0.091)
          Length = 581

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 5/71 (7%)
 Frame = -2

Query: 652 GRVVEPASRA---SXWR--AGFGTRINYDDDGINCGGFHRQWETNNGKCGICGDPYDDSP 488
           G+V++P +R+   S W      G+ + +D     C  F      ++    + G P+  +P
Sbjct: 54  GKVIDPGNRSTVGSSWEHLEDLGSSVRFDP----CLTFINPTMNHHSSEELKGAPWGKTP 109

Query: 487 PRPHELGGAYG 455
           P+  E GGA G
Sbjct: 110 PKTPEEGGANG 120


>SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046)
          Length = 797

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 15/30 (50%), Positives = 17/30 (56%)
 Frame = +3

Query: 144 PRAPVPLGQTPQLLPAVYVHCRTQCSHETP 233
           PR PVP   TP++LPA Y   R   S  TP
Sbjct: 523 PRTPVPAYFTPRVLPA-YTTPRVHHSPRTP 551


>SB_30331| Best HMM Match : Amidase (HMM E-Value=0)
          Length = 555

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
 Frame = -2

Query: 568 NCGGFHRQWETNNGKCGICGDPYDDSPPRPHELGGAYGNGVIVAKYSS----GQVIDTTV 401
           NC      WET N   G   +PYD S       G + G G I+A   S    G  +  ++
Sbjct: 195 NCSELCMWWETVNNVYGRTRNPYDTSRVAG---GSSGGEGAIIAAAGSLCGVGSDVGGSI 251

Query: 400 EITAYHRG 377
            + A+  G
Sbjct: 252 RMPAFFNG 259


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,118,324
Number of Sequences: 59808
Number of extensions: 593666
Number of successful extensions: 1718
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1706
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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