Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11h10f
         (481 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   2.6  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   4.5  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   4.5  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   5.9  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   7.8  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 10/30 (33%), Positives = 15/30 (50%)
 Frame = +1

Query: 91  ISLHSLPCWRLFVHTAGWWSPHLELRPGVP 180
           +SLH    WR F + A   +P+ +   G P
Sbjct: 297 LSLHGQLLWREFFYCAATKNPNFDKMIGNP 326


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -2

Query: 480 PGGISRSIPVRYCWGRC 430
           PG + + IP   C GRC
Sbjct: 53  PGCVPKPIPSFACIGRC 69


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/32 (25%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = -1

Query: 454 CSLLLGSVHSLNSQ*PRW*A--VISTVVSMTC 365
           C++ +  + S N++ PRW     I  ++++ C
Sbjct: 23  CAICVPKITSTNNEVPRWYICYTIGVIITIGC 54


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 120 TVRAHGRVVEPASRASAWRAG 182
           T+  + +V+EP S  +AW+ G
Sbjct: 18  TLNNYQQVMEPRSPHTAWQFG 38


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 136 AGWWSPHLELRPGV 177
           AG + PH+  RPG+
Sbjct: 23  AGLYEPHVAHRPGL 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,350
Number of Sequences: 336
Number of extensions: 2557
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11247091
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)