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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11h10f
         (481 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0460 - 23118221-23118406,23118417-23118671,23118763-231188...    30   0.85 
04_03_1029 - 21835441-21835856,21836666-21836852                       30   1.1  
12_02_0160 + 14585559-14586230                                         29   2.6  
01_05_0489 + 22652479-22653718,22653882-22654063,22654172-226542...    29   2.6  
11_01_0385 + 2915532-2916482                                           28   3.4  
05_01_0258 + 1984666-1984878,1985019-1985852                           28   4.5  
03_06_0058 - 31330067-31330978                                         28   4.5  
01_01_0079 - 603019-603129,603302-603367,603489-603554,603681-60...    28   4.5  
12_01_0961 + 9566730-9566998,9567096-9567187,9567294-9567427,956...    27   7.9  
09_04_0445 - 17677126-17677512,17677608-17678564                       27   7.9  
06_03_0272 + 19053455-19053587,19054665-19056627,19056827-190568...    27   7.9  
02_04_0489 + 23404757-23404812,23406170-23406296,23406418-234064...    27   7.9  

>02_04_0460 -
           23118221-23118406,23118417-23118671,23118763-23118851,
           23119527-23119605,23121317-23121484,23121760-23122137
          Length = 384

 Score = 30.3 bits (65), Expect = 0.85
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +1

Query: 76  ICSCHISLHSLPCWRLFVHTAGW 144
           I  CH+ L SLPCW ++ +  G+
Sbjct: 310 IRKCHLQLSSLPCWNVYSNYHGY 332


>04_03_1029 - 21835441-21835856,21836666-21836852
          Length = 200

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -1

Query: 322 PPNSCGRGGESSYGSPQMPHFPLLVSH*RWKPPQLMP 212
           P   CGR  E  +G P+ P   L     +W+ P+L P
Sbjct: 97  PREECGRRDEGPHGPPRAPLPDLHRGREQWRAPRLRP 133


>12_02_0160 + 14585559-14586230
          Length = 223

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
 Frame = +3

Query: 99  AFVALLATVRAHGRVVEPASRA---SAWRAGFGTRINYDDDGINCGGFHRQWETNNGKCG 269
           A   + A+ R  G   E A R      WR G    +    DG       R+W+   G+ G
Sbjct: 46  AATGVAASPRGGGVAAETARRRRRRQRWRGGRRGEVETTGDG-------RRWQ---GRGG 95

Query: 270 ICGDPYDDSPPRPHELG 320
             G    D+PP P ELG
Sbjct: 96  AAGAQDLDAPPMPRELG 112


>01_05_0489 +
           22652479-22653718,22653882-22654063,22654172-22654279,
           22654364-22654467,22654570-22654657,22654760-22654870,
           22654955-22655020,22656740-22656799,22656869-22657411,
           22657646-22657765,22657845-22657964,22659083-22659136,
           22659236-22659331,22660580-22660681
          Length = 997

 Score = 28.7 bits (61), Expect = 2.6
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +2

Query: 65  KHEKYAVVIFPCIRCLVGDCSCTRQG 142
           ++EK   V+FPC+  ++ DC   R+G
Sbjct: 795 RNEKTEEVVFPCVLKIIPDCVFNRKG 820


>11_01_0385 + 2915532-2916482
          Length = 316

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -2

Query: 174 ARPKLEMRAPPPCRVHEQSPTRQRMQG 94
           ++ K E RAPPP + HE++P + +  G
Sbjct: 102 SKHKDEERAPPPKKHHEKAPPKSKHHG 128


>05_01_0258 + 1984666-1984878,1985019-1985852
          Length = 348

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 15/32 (46%), Positives = 16/32 (50%)
 Frame = +3

Query: 93  FLAFVALLATVRAHGRVVEPASRASAWRAGFG 188
           F A  ALL    A G VVE A  A+ W   FG
Sbjct: 286 FHADWALLTGKEARGHVVEYAKNATLWNVDFG 317


>03_06_0058 - 31330067-31330978
          Length = 303

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 13/32 (40%), Positives = 18/32 (56%)
 Frame = -1

Query: 190 VPKPARQAEARDAGSTTLPCARTVANKATNAR 95
           VP P+RQA    +G+TT P  + V     +AR
Sbjct: 79  VPPPSRQAVTGQSGTTTAPSGQCVGIALQSAR 110


>01_01_0079 -
           603019-603129,603302-603367,603489-603554,603681-603824,
           603932-604429
          Length = 294

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +3

Query: 285 YDDSPPRPHELGGAYGNGV 341
           YDD P  P E+ G +GNGV
Sbjct: 20  YDDEPSMPLEILGYHGNGV 38


>12_01_0961 +
           9566730-9566998,9567096-9567187,9567294-9567427,
           9567542-9567591,9569026-9569100,9569179-9569734
          Length = 391

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 20/86 (23%), Positives = 32/86 (37%)
 Frame = -1

Query: 349 ATMTPLP*APPNSCGRGGESSYGSPQMPHFPLLVSH*RWKPPQLMPSSS*LILVPKPARQ 170
           A  +P P + P            S   P F    +   W    L+ ++  L++   P R+
Sbjct: 8   AAESPNPRSAPRRAAAAAAKDASSFLSPRFRSAAAQAGWDEESLLHAA--LVVEDTPVRE 65

Query: 169 AEARDAGSTTLPCARTVANKATNARK 92
           +  R   STT   A    +  +N RK
Sbjct: 66  SRRRRRASTTSSSAGGGGSAGSNTRK 91


>09_04_0445 - 17677126-17677512,17677608-17678564
          Length = 447

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +1

Query: 130 HTAGWWSPHLELRPGVP 180
           H   WW PH E  PG P
Sbjct: 379 HEGSWWDPHGEPCPGSP 395


>06_03_0272 +
           19053455-19053587,19054665-19056627,19056827-19056887,
           19056975-19057198,19057573-19057642,19058453-19058515
          Length = 837

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 177 HARPKLEMRAPPPCRVHEQSPTRQRMQG 94
           H  P L +++P   +VH   PTRQ + G
Sbjct: 269 HHSPSLNVQSPNIPQVHAPLPTRQNLHG 296


>02_04_0489 +
           23404757-23404812,23406170-23406296,23406418-23406487,
           23406997-23407102,23407185-23407296,23407792-23407914,
           23408017-23408176,23408300-23408376,23408474-23408526,
           23408700-23408754,23409049-23409683,23410412-23410733,
           23410838-23411146,23411468-23411470
          Length = 735

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 12/33 (36%), Positives = 15/33 (45%)
 Frame = +3

Query: 222 CGGFHRQWETNNGKCGICGDPYDDSPPRPHELG 320
           CGG H+Q E  +G  G+      D PP     G
Sbjct: 556 CGGRHQQREVTSGGAGVEHGSIGDVPPSIRRAG 588


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,458,779
Number of Sequences: 37544
Number of extensions: 332519
Number of successful extensions: 1092
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 991020332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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