BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV11h10f (481 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_04_0460 - 23118221-23118406,23118417-23118671,23118763-231188... 30 0.85 04_03_1029 - 21835441-21835856,21836666-21836852 30 1.1 12_02_0160 + 14585559-14586230 29 2.6 01_05_0489 + 22652479-22653718,22653882-22654063,22654172-226542... 29 2.6 11_01_0385 + 2915532-2916482 28 3.4 05_01_0258 + 1984666-1984878,1985019-1985852 28 4.5 03_06_0058 - 31330067-31330978 28 4.5 01_01_0079 - 603019-603129,603302-603367,603489-603554,603681-60... 28 4.5 12_01_0961 + 9566730-9566998,9567096-9567187,9567294-9567427,956... 27 7.9 09_04_0445 - 17677126-17677512,17677608-17678564 27 7.9 06_03_0272 + 19053455-19053587,19054665-19056627,19056827-190568... 27 7.9 02_04_0489 + 23404757-23404812,23406170-23406296,23406418-234064... 27 7.9 >02_04_0460 - 23118221-23118406,23118417-23118671,23118763-23118851, 23119527-23119605,23121317-23121484,23121760-23122137 Length = 384 Score = 30.3 bits (65), Expect = 0.85 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +1 Query: 76 ICSCHISLHSLPCWRLFVHTAGW 144 I CH+ L SLPCW ++ + G+ Sbjct: 310 IRKCHLQLSSLPCWNVYSNYHGY 332 >04_03_1029 - 21835441-21835856,21836666-21836852 Length = 200 Score = 29.9 bits (64), Expect = 1.1 Identities = 13/37 (35%), Positives = 18/37 (48%) Frame = -1 Query: 322 PPNSCGRGGESSYGSPQMPHFPLLVSH*RWKPPQLMP 212 P CGR E +G P+ P L +W+ P+L P Sbjct: 97 PREECGRRDEGPHGPPRAPLPDLHRGREQWRAPRLRP 133 >12_02_0160 + 14585559-14586230 Length = 223 Score = 28.7 bits (61), Expect = 2.6 Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 3/77 (3%) Frame = +3 Query: 99 AFVALLATVRAHGRVVEPASRA---SAWRAGFGTRINYDDDGINCGGFHRQWETNNGKCG 269 A + A+ R G E A R WR G + DG R+W+ G+ G Sbjct: 46 AATGVAASPRGGGVAAETARRRRRRQRWRGGRRGEVETTGDG-------RRWQ---GRGG 95 Query: 270 ICGDPYDDSPPRPHELG 320 G D+PP P ELG Sbjct: 96 AAGAQDLDAPPMPRELG 112 >01_05_0489 + 22652479-22653718,22653882-22654063,22654172-22654279, 22654364-22654467,22654570-22654657,22654760-22654870, 22654955-22655020,22656740-22656799,22656869-22657411, 22657646-22657765,22657845-22657964,22659083-22659136, 22659236-22659331,22660580-22660681 Length = 997 Score = 28.7 bits (61), Expect = 2.6 Identities = 10/26 (38%), Positives = 17/26 (65%) Frame = +2 Query: 65 KHEKYAVVIFPCIRCLVGDCSCTRQG 142 ++EK V+FPC+ ++ DC R+G Sbjct: 795 RNEKTEEVVFPCVLKIIPDCVFNRKG 820 >11_01_0385 + 2915532-2916482 Length = 316 Score = 28.3 bits (60), Expect = 3.4 Identities = 11/27 (40%), Positives = 18/27 (66%) Frame = -2 Query: 174 ARPKLEMRAPPPCRVHEQSPTRQRMQG 94 ++ K E RAPPP + HE++P + + G Sbjct: 102 SKHKDEERAPPPKKHHEKAPPKSKHHG 128 >05_01_0258 + 1984666-1984878,1985019-1985852 Length = 348 Score = 27.9 bits (59), Expect = 4.5 Identities = 15/32 (46%), Positives = 16/32 (50%) Frame = +3 Query: 93 FLAFVALLATVRAHGRVVEPASRASAWRAGFG 188 F A ALL A G VVE A A+ W FG Sbjct: 286 FHADWALLTGKEARGHVVEYAKNATLWNVDFG 317 >03_06_0058 - 31330067-31330978 Length = 303 Score = 27.9 bits (59), Expect = 4.5 Identities = 13/32 (40%), Positives = 18/32 (56%) Frame = -1 Query: 190 VPKPARQAEARDAGSTTLPCARTVANKATNAR 95 VP P+RQA +G+TT P + V +AR Sbjct: 79 VPPPSRQAVTGQSGTTTAPSGQCVGIALQSAR 110 >01_01_0079 - 603019-603129,603302-603367,603489-603554,603681-603824, 603932-604429 Length = 294 Score = 27.9 bits (59), Expect = 4.5 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +3 Query: 285 YDDSPPRPHELGGAYGNGV 341 YDD P P E+ G +GNGV Sbjct: 20 YDDEPSMPLEILGYHGNGV 38 >12_01_0961 + 9566730-9566998,9567096-9567187,9567294-9567427, 9567542-9567591,9569026-9569100,9569179-9569734 Length = 391 Score = 27.1 bits (57), Expect = 7.9 Identities = 20/86 (23%), Positives = 32/86 (37%) Frame = -1 Query: 349 ATMTPLP*APPNSCGRGGESSYGSPQMPHFPLLVSH*RWKPPQLMPSSS*LILVPKPARQ 170 A +P P + P S P F + W L+ ++ L++ P R+ Sbjct: 8 AAESPNPRSAPRRAAAAAAKDASSFLSPRFRSAAAQAGWDEESLLHAA--LVVEDTPVRE 65 Query: 169 AEARDAGSTTLPCARTVANKATNARK 92 + R STT A + +N RK Sbjct: 66 SRRRRRASTTSSSAGGGGSAGSNTRK 91 >09_04_0445 - 17677126-17677512,17677608-17678564 Length = 447 Score = 27.1 bits (57), Expect = 7.9 Identities = 9/17 (52%), Positives = 9/17 (52%) Frame = +1 Query: 130 HTAGWWSPHLELRPGVP 180 H WW PH E PG P Sbjct: 379 HEGSWWDPHGEPCPGSP 395 >06_03_0272 + 19053455-19053587,19054665-19056627,19056827-19056887, 19056975-19057198,19057573-19057642,19058453-19058515 Length = 837 Score = 27.1 bits (57), Expect = 7.9 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = -2 Query: 177 HARPKLEMRAPPPCRVHEQSPTRQRMQG 94 H P L +++P +VH PTRQ + G Sbjct: 269 HHSPSLNVQSPNIPQVHAPLPTRQNLHG 296 >02_04_0489 + 23404757-23404812,23406170-23406296,23406418-23406487, 23406997-23407102,23407185-23407296,23407792-23407914, 23408017-23408176,23408300-23408376,23408474-23408526, 23408700-23408754,23409049-23409683,23410412-23410733, 23410838-23411146,23411468-23411470 Length = 735 Score = 27.1 bits (57), Expect = 7.9 Identities = 12/33 (36%), Positives = 15/33 (45%) Frame = +3 Query: 222 CGGFHRQWETNNGKCGICGDPYDDSPPRPHELG 320 CGG H+Q E +G G+ D PP G Sbjct: 556 CGGRHQQREVTSGGAGVEHGSIGDVPPSIRRAG 588 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,458,779 Number of Sequences: 37544 Number of extensions: 332519 Number of successful extensions: 1092 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1059 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1092 length of database: 14,793,348 effective HSP length: 76 effective length of database: 11,940,004 effective search space used: 991020332 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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