BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV11h09f (443 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 10_08_0904 + 21464762-21467479 30 0.73 10_02_0167 - 6100676-6102111,6102174-6102708,6102967-6103975,610... 28 2.9 07_03_1689 + 28710936-28711129,28711283-28711341,28711858-287118... 28 3.9 11_01_0620 - 4964263-4965052,4965578-4965663,4966332-4966413,496... 27 5.1 06_01_0658 + 4772855-4772983,4773108-4773218,4773335-4773366,477... 27 5.1 03_06_0274 + 32797541-32797570,32797682-32797769,32798291-327984... 27 5.1 05_07_0173 + 28140484-28140869,28141079-28141481,28141719-281417... 27 6.8 >10_08_0904 + 21464762-21467479 Length = 905 Score = 30.3 bits (65), Expect = 0.73 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -1 Query: 89 RCRARR*QWPYNKHHFHRTPRPTNPP 12 +C AR+ QW + HR+PRPT PP Sbjct: 3 KCAARQRQWRWPL--LHRSPRPTPPP 26 >10_02_0167 - 6100676-6102111,6102174-6102708,6102967-6103975, 6104006-6105036 Length = 1336 Score = 28.3 bits (60), Expect = 2.9 Identities = 18/73 (24%), Positives = 33/73 (45%) Frame = +2 Query: 119 QPESKFPFSQVFLPPKDTGKHTEFTENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIE 298 +P+S +P S + + G T ++ + +V E+E C W M+ IE Sbjct: 451 EPDSAYPDSDLHVSHIFGGSTTYSSKREYKKV-----EREVCSTWQGAAPKMKWSEQKIE 505 Query: 299 YLEWDNCYTEIVP 337 + E D+ T ++P Sbjct: 506 FSEEDHPKTSVIP 518 >07_03_1689 + 28710936-28711129,28711283-28711341,28711858-28711892, 28712123-28712226,28712325-28712397,28712495-28712553, 28712656-28712721,28712815-28712898,28712995-28713059, 28713152-28713342,28713522-28713612,28714076-28714134, 28714732-28714872,28715214-28715321 Length = 442 Score = 27.9 bits (59), Expect = 3.9 Identities = 11/19 (57%), Positives = 15/19 (78%), Gaps = 1/19 (5%) Frame = +2 Query: 293 IEYLEWDNCYT-EIVPKDR 346 ++YL++DNCY I PKDR Sbjct: 157 VDYLKYDNCYNLGIKPKDR 175 >11_01_0620 - 4964263-4965052,4965578-4965663,4966332-4966413, 4967052-4967156,4967600-4967772,4967988-4968101, 4973939-4974037,4974320-4974398,4975424-4975492, 4975955-4976061 Length = 567 Score = 27.5 bits (58), Expect = 5.1 Identities = 12/38 (31%), Positives = 19/38 (50%) Frame = +2 Query: 122 PESKFPFSQVFLPPKDTGKHTEFTENQEVEVFARSNEK 235 P+S+ P+ LPP + K FTE V+ + + K Sbjct: 321 PKSERPYPSPLLPPPPSSKRPVFTEASSVDYLSGDSYK 358 >06_01_0658 + 4772855-4772983,4773108-4773218,4773335-4773366, 4773469-4773637,4773728-4773934,4774318-4774362 Length = 230 Score = 27.5 bits (58), Expect = 5.1 Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 3/96 (3%) Frame = +2 Query: 29 EVYGENGAYYKAIVTDVLDNEVLVAFENDWQPESKFPFSQVFLPPKDTGKHTEFTENQEV 208 E+ E G+ Y V +L + V F W FS+ +LP +D E+ E Sbjct: 120 ELEEELGSDYPIFVKPMLQSHVTGGF---WLSLPTH-FSRKYLPKRDETIRLVDEEDDEF 175 Query: 209 EVFARSNEKEACGWW---TANIKMMRGDFLVIEYLE 307 + +N++ G W + K++ GD LV + ++ Sbjct: 176 DTLYLANKRGLSGGWRGFSIAHKLVDGDCLVFQLIQ 211 >03_06_0274 + 32797541-32797570,32797682-32797769,32798291-32798401, 32798678-32798765,32798918-32799022,32799117-32799617, 32799749-32799884,32800023-32800216,32800306-32800414, 32800803-32800982 Length = 513 Score = 27.5 bits (58), Expect = 5.1 Identities = 12/19 (63%), Positives = 15/19 (78%) Frame = -3 Query: 186 SVCLPVSLGGKKT*ENGNF 130 SVC PVSLGG+ + +GNF Sbjct: 245 SVCDPVSLGGRPSDFDGNF 263 >05_07_0173 + 28140484-28140869,28141079-28141481,28141719-28141781, 28142350-28142535,28144695-28145076,28145689-28145780, 28145988-28146737,28146969-28147100,28147149-28147247, 28147977-28148132,28150187-28150317,28150798-28151254, 28151327-28151668,28152137-28153001,28153112-28153170, 28153806-28154261,28154835-28154873,28155016-28155201 Length = 1727 Score = 27.1 bits (57), Expect = 6.8 Identities = 10/29 (34%), Positives = 15/29 (51%) Frame = -2 Query: 226 RPSKYFHLLVLSKFCVFASVFRW*ENLRK 140 RP + H+L KF + + +W E L K Sbjct: 495 RPKRILHMLKKKKFVLMVELHKWLERLEK 523 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,250,947 Number of Sequences: 37544 Number of extensions: 266121 Number of successful extensions: 698 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 684 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 697 length of database: 14,793,348 effective HSP length: 76 effective length of database: 11,940,004 effective search space used: 847740284 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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