BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV11h09f (443 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJ422083-1|CAD19444.1| 681|Drosophila melanogaster fragile X re... 112 2e-25 AJ413217-1|CAC88757.2| 529|Drosophila melanogaster fragile X re... 112 2e-25 AJ271221-1|CAB66340.1| 684|Drosophila melanogaster fragile X re... 112 2e-25 AF305881-1|AAG22045.1| 681|Drosophila melanogaster KH domain co... 112 2e-25 AF205597-1|AAF14640.1| 681|Drosophila melanogaster Fragile X re... 112 2e-25 AF205596-1|AAF14639.1| 681|Drosophila melanogaster Fragile X re... 112 2e-25 AE014297-1093|AAN13454.1| 529|Drosophila melanogaster CG6203-PB... 112 2e-25 AE014297-1091|AAF54493.2| 684|Drosophila melanogaster CG6203-PA... 112 2e-25 AE014297-1090|AAN13452.1| 681|Drosophila melanogaster CG6203-PD... 112 2e-25 AE014297-1089|AAN13451.1| 681|Drosophila melanogaster CG6203-PC... 112 2e-25 AE014297-1092|AAN13453.1| 643|Drosophila melanogaster CG6203-PE... 83 2e-16 BT003200-1|AAO24955.1| 881|Drosophila melanogaster RE52776p pro... 30 1.6 AY051867-1|AAK93291.1| 507|Drosophila melanogaster LD36294p pro... 30 1.6 AE013599-2980|AAM68400.1| 881|Drosophila melanogaster CG11055-P... 30 1.6 AE013599-2979|AAF57495.1| 881|Drosophila melanogaster CG11055-P... 30 1.6 AE013599-2978|AAF57494.1| 881|Drosophila melanogaster CG11055-P... 30 1.6 AE014298-2781|AAF48895.2| 1868|Drosophila melanogaster CG7282-PA... 29 3.8 AE014297-1131|AAS65134.1| 1427|Drosophila melanogaster CG11870-P... 28 6.6 AE014297-1130|AAF54517.3| 1427|Drosophila melanogaster CG11870-P... 28 6.6 AE014297-1129|AAF54516.3| 1427|Drosophila melanogaster CG11870-P... 28 6.6 AY058653-1|AAL13882.1| 1207|Drosophila melanogaster LD35434p pro... 27 8.7 AF254373-1|AAK53539.1| 2497|Drosophila melanogaster DOMINO B pro... 27 8.7 AF076776-1|AAF82185.1| 3201|Drosophila melanogaster helicase DOM... 27 8.7 AE013599-3190|AAM70872.2| 2497|Drosophila melanogaster CG9696-PE... 27 8.7 AE013599-3189|AAM70871.1| 3198|Drosophila melanogaster CG9696-PA... 27 8.7 AE013599-3188|AAM70870.1| 3183|Drosophila melanogaster CG9696-PD... 27 8.7 >AJ422083-1|CAD19444.1| 681|Drosophila melanogaster fragile X related protein. Length = 681 Score = 112 bits (270), Expect = 2e-25 Identities = 60/133 (45%), Positives = 79/133 (59%), Gaps = 3/133 (2%) Frame = +2 Query: 11 MEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPES-KFPFSQVFLPPKDTGKHTE 187 MEDL VEV +NGAYYK VT V D+ + V + D PES K+PF V LPP++T + Sbjct: 1 MEDLLVEVRLDNGAYYKGQVTAVADDGIFV--DVDGVPESMKYPFVNVRLPPEETVEVAA 58 Query: 188 --FTENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLXVKL 361 F E EVEVF R+N++E CGWW IKM + + + Y+ ++ YTEI RL K Sbjct: 59 PIFEEGMEVEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKN 118 Query: 362 PKTPIDKNTFHKF 400 PI TF++F Sbjct: 119 SNPPITAKTFYQF 131 >AJ413217-1|CAC88757.2| 529|Drosophila melanogaster fragile X related protein protein. Length = 529 Score = 112 bits (270), Expect = 2e-25 Identities = 60/133 (45%), Positives = 79/133 (59%), Gaps = 3/133 (2%) Frame = +2 Query: 11 MEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPES-KFPFSQVFLPPKDTGKHTE 187 MEDL VEV +NGAYYK VT V D+ + V + D PES K+PF V LPP++T + Sbjct: 1 MEDLLVEVRLDNGAYYKGQVTAVADDGIFV--DVDGVPESMKYPFVNVRLPPEETVEVAA 58 Query: 188 --FTENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLXVKL 361 F E EVEVF R+N++E CGWW IKM + + + Y+ ++ YTEI RL K Sbjct: 59 PIFEEGMEVEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKN 118 Query: 362 PKTPIDKNTFHKF 400 PI TF++F Sbjct: 119 SNPPITAKTFYQF 131 >AJ271221-1|CAB66340.1| 684|Drosophila melanogaster fragile X related protein protein. Length = 684 Score = 112 bits (270), Expect = 2e-25 Identities = 60/133 (45%), Positives = 79/133 (59%), Gaps = 3/133 (2%) Frame = +2 Query: 11 MEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPES-KFPFSQVFLPPKDTGKHTE 187 MEDL VEV +NGAYYK VT V D+ + V + D PES K+PF V LPP++T + Sbjct: 1 MEDLLVEVRLDNGAYYKGQVTAVADDGIFV--DVDGVPESMKYPFVNVRLPPEETVEVAA 58 Query: 188 --FTENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLXVKL 361 F E EVEVF R+N++E CGWW IKM + + + Y+ ++ YTEI RL K Sbjct: 59 PIFEEGMEVEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKN 118 Query: 362 PKTPIDKNTFHKF 400 PI TF++F Sbjct: 119 SNPPITAKTFYQF 131 >AF305881-1|AAG22045.1| 681|Drosophila melanogaster KH domain containing RNA-bindingprotein FMR1 protein. Length = 681 Score = 112 bits (270), Expect = 2e-25 Identities = 60/133 (45%), Positives = 79/133 (59%), Gaps = 3/133 (2%) Frame = +2 Query: 11 MEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPES-KFPFSQVFLPPKDTGKHTE 187 MEDL VEV +NGAYYK VT V D+ + V + D PES K+PF V LPP++T + Sbjct: 1 MEDLLVEVRLDNGAYYKGQVTAVADDGIFV--DVDGVPESMKYPFVNVRLPPEETVEVAA 58 Query: 188 --FTENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLXVKL 361 F E EVEVF R+N++E CGWW IKM + + + Y+ ++ YTEI RL K Sbjct: 59 PIFEEGMEVEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKN 118 Query: 362 PKTPIDKNTFHKF 400 PI TF++F Sbjct: 119 SNPPITAKTFYQF 131 >AF205597-1|AAF14640.1| 681|Drosophila melanogaster Fragile X related protein. Length = 681 Score = 112 bits (270), Expect = 2e-25 Identities = 60/133 (45%), Positives = 79/133 (59%), Gaps = 3/133 (2%) Frame = +2 Query: 11 MEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPES-KFPFSQVFLPPKDTGKHTE 187 MEDL VEV +NGAYYK VT V D+ + V + D PES K+PF V LPP++T + Sbjct: 1 MEDLLVEVRLDNGAYYKGQVTAVADDGIFV--DVDGVPESMKYPFVNVRLPPEETVEVAA 58 Query: 188 --FTENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLXVKL 361 F E EVEVF R+N++E CGWW IKM + + + Y+ ++ YTEI RL K Sbjct: 59 PIFEEGMEVEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKN 118 Query: 362 PKTPIDKNTFHKF 400 PI TF++F Sbjct: 119 SNPPITAKTFYQF 131 >AF205596-1|AAF14639.1| 681|Drosophila melanogaster Fragile X related protein. Length = 681 Score = 112 bits (270), Expect = 2e-25 Identities = 60/133 (45%), Positives = 79/133 (59%), Gaps = 3/133 (2%) Frame = +2 Query: 11 MEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPES-KFPFSQVFLPPKDTGKHTE 187 MEDL VEV +NGAYYK VT V D+ + V + D PES K+PF V LPP++T + Sbjct: 1 MEDLLVEVRLDNGAYYKGQVTAVADDGIFV--DVDGVPESMKYPFVNVRLPPEETVEVAA 58 Query: 188 --FTENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLXVKL 361 F E EVEVF R+N++E CGWW IKM + + + Y+ ++ YTEI RL K Sbjct: 59 PIFEEGMEVEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKN 118 Query: 362 PKTPIDKNTFHKF 400 PI TF++F Sbjct: 119 SNPPITAKTFYQF 131 >AE014297-1093|AAN13454.1| 529|Drosophila melanogaster CG6203-PB, isoform B protein. Length = 529 Score = 112 bits (270), Expect = 2e-25 Identities = 60/133 (45%), Positives = 79/133 (59%), Gaps = 3/133 (2%) Frame = +2 Query: 11 MEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPES-KFPFSQVFLPPKDTGKHTE 187 MEDL VEV +NGAYYK VT V D+ + V + D PES K+PF V LPP++T + Sbjct: 1 MEDLLVEVRLDNGAYYKGQVTAVADDGIFV--DVDGVPESMKYPFVNVRLPPEETVEVAA 58 Query: 188 --FTENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLXVKL 361 F E EVEVF R+N++E CGWW IKM + + + Y+ ++ YTEI RL K Sbjct: 59 PIFEEGMEVEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKN 118 Query: 362 PKTPIDKNTFHKF 400 PI TF++F Sbjct: 119 SNPPITAKTFYQF 131 >AE014297-1091|AAF54493.2| 684|Drosophila melanogaster CG6203-PA, isoform A protein. Length = 684 Score = 112 bits (270), Expect = 2e-25 Identities = 60/133 (45%), Positives = 79/133 (59%), Gaps = 3/133 (2%) Frame = +2 Query: 11 MEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPES-KFPFSQVFLPPKDTGKHTE 187 MEDL VEV +NGAYYK VT V D+ + V + D PES K+PF V LPP++T + Sbjct: 1 MEDLLVEVRLDNGAYYKGQVTAVADDGIFV--DVDGVPESMKYPFVNVRLPPEETVEVAA 58 Query: 188 --FTENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLXVKL 361 F E EVEVF R+N++E CGWW IKM + + + Y+ ++ YTEI RL K Sbjct: 59 PIFEEGMEVEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKN 118 Query: 362 PKTPIDKNTFHKF 400 PI TF++F Sbjct: 119 SNPPITAKTFYQF 131 >AE014297-1090|AAN13452.1| 681|Drosophila melanogaster CG6203-PD, isoform D protein. Length = 681 Score = 112 bits (270), Expect = 2e-25 Identities = 60/133 (45%), Positives = 79/133 (59%), Gaps = 3/133 (2%) Frame = +2 Query: 11 MEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPES-KFPFSQVFLPPKDTGKHTE 187 MEDL VEV +NGAYYK VT V D+ + V + D PES K+PF V LPP++T + Sbjct: 1 MEDLLVEVRLDNGAYYKGQVTAVADDGIFV--DVDGVPESMKYPFVNVRLPPEETVEVAA 58 Query: 188 --FTENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLXVKL 361 F E EVEVF R+N++E CGWW IKM + + + Y+ ++ YTEI RL K Sbjct: 59 PIFEEGMEVEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKN 118 Query: 362 PKTPIDKNTFHKF 400 PI TF++F Sbjct: 119 SNPPITAKTFYQF 131 >AE014297-1089|AAN13451.1| 681|Drosophila melanogaster CG6203-PC, isoform C protein. Length = 681 Score = 112 bits (270), Expect = 2e-25 Identities = 60/133 (45%), Positives = 79/133 (59%), Gaps = 3/133 (2%) Frame = +2 Query: 11 MEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPES-KFPFSQVFLPPKDTGKHTE 187 MEDL VEV +NGAYYK VT V D+ + V + D PES K+PF V LPP++T + Sbjct: 1 MEDLLVEVRLDNGAYYKGQVTAVADDGIFV--DVDGVPESMKYPFVNVRLPPEETVEVAA 58 Query: 188 --FTENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYLEWDNCYTEIVPKDRLXVKL 361 F E EVEVF R+N++E CGWW IKM + + + Y+ ++ YTEI RL K Sbjct: 59 PIFEEGMEVEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYIGFETSYTEICELGRLRAKN 118 Query: 362 PKTPIDKNTFHKF 400 PI TF++F Sbjct: 119 SNPPITAKTFYQF 131 >AE014297-1092|AAN13453.1| 643|Drosophila melanogaster CG6203-PE, isoform E protein. Length = 643 Score = 83.0 bits (196), Expect = 2e-16 Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 2/92 (2%) Frame = +2 Query: 131 KFPFSQVFLPPKDTGKHTE--FTENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYL 304 K+PF V LPP++T + F E EVEVF R+N++E CGWW IKM + + + Y+ Sbjct: 2 KYPFVNVRLPPEETVEVAAPIFEEGMEVEVFTRTNDRETCGWWVGIIKMRKAEIYAVAYI 61 Query: 305 EWDNCYTEIVPKDRLXVKLPKTPIDKNTFHKF 400 ++ YTEI RL K PI TF++F Sbjct: 62 GFETSYTEICELGRLRAKNSNPPITAKTFYQF 93 >BT003200-1|AAO24955.1| 881|Drosophila melanogaster RE52776p protein. Length = 881 Score = 29.9 bits (64), Expect = 1.6 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +2 Query: 83 DNEVLVAFENDWQPESKFPFSQVFLPPKDT 172 DN V+FE+D QP +P PPKDT Sbjct: 620 DNSSCVSFEDDSQPIVHYPIEISADPPKDT 649 >AY051867-1|AAK93291.1| 507|Drosophila melanogaster LD36294p protein. Length = 507 Score = 29.9 bits (64), Expect = 1.6 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +2 Query: 83 DNEVLVAFENDWQPESKFPFSQVFLPPKDT 172 DN V+FE+D QP +P PPKDT Sbjct: 246 DNSSCVSFEDDSQPIVHYPIEISADPPKDT 275 >AE013599-2980|AAM68400.1| 881|Drosophila melanogaster CG11055-PC, isoform C protein. Length = 881 Score = 29.9 bits (64), Expect = 1.6 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +2 Query: 83 DNEVLVAFENDWQPESKFPFSQVFLPPKDT 172 DN V+FE+D QP +P PPKDT Sbjct: 620 DNSSCVSFEDDSQPIVHYPIEISADPPKDT 649 >AE013599-2979|AAF57495.1| 881|Drosophila melanogaster CG11055-PB, isoform B protein. Length = 881 Score = 29.9 bits (64), Expect = 1.6 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +2 Query: 83 DNEVLVAFENDWQPESKFPFSQVFLPPKDT 172 DN V+FE+D QP +P PPKDT Sbjct: 620 DNSSCVSFEDDSQPIVHYPIEISADPPKDT 649 >AE013599-2978|AAF57494.1| 881|Drosophila melanogaster CG11055-PA, isoform A protein. Length = 881 Score = 29.9 bits (64), Expect = 1.6 Identities = 14/30 (46%), Positives = 17/30 (56%) Frame = +2 Query: 83 DNEVLVAFENDWQPESKFPFSQVFLPPKDT 172 DN V+FE+D QP +P PPKDT Sbjct: 620 DNSSCVSFEDDSQPIVHYPIEISADPPKDT 649 >AE014298-2781|AAF48895.2| 1868|Drosophila melanogaster CG7282-PA protein. Length = 1868 Score = 28.7 bits (61), Expect = 3.8 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = +2 Query: 263 IKMMRG-DFLVIEYLEWDNCYTEIVPKDRLXVKLPK 367 I + RG ++ Y W+N Y E VP++R+ L K Sbjct: 104 ISVQRGVPMYLVHYTGWNNRYDEWVPRERIAENLTK 139 >AE014297-1131|AAS65134.1| 1427|Drosophila melanogaster CG11870-PC, isoform C protein. Length = 1427 Score = 27.9 bits (59), Expect = 6.6 Identities = 9/43 (20%), Positives = 24/43 (55%) Frame = +2 Query: 116 WQPESKFPFSQVFLPPKDTGKHTEFTENQEVEVFARSNEKEAC 244 WQP++ + + +F PP+ + + Q+ + + ++K++C Sbjct: 890 WQPQASYSTASIFQPPQSQSSPFKMLQ-QQYQQRCQEDQKQSC 931 >AE014297-1130|AAF54517.3| 1427|Drosophila melanogaster CG11870-PB, isoform B protein. Length = 1427 Score = 27.9 bits (59), Expect = 6.6 Identities = 9/43 (20%), Positives = 24/43 (55%) Frame = +2 Query: 116 WQPESKFPFSQVFLPPKDTGKHTEFTENQEVEVFARSNEKEAC 244 WQP++ + + +F PP+ + + Q+ + + ++K++C Sbjct: 890 WQPQASYSTASIFQPPQSQSSPFKMLQ-QQYQQRCQEDQKQSC 931 >AE014297-1129|AAF54516.3| 1427|Drosophila melanogaster CG11870-PA, isoform A protein. Length = 1427 Score = 27.9 bits (59), Expect = 6.6 Identities = 9/43 (20%), Positives = 24/43 (55%) Frame = +2 Query: 116 WQPESKFPFSQVFLPPKDTGKHTEFTENQEVEVFARSNEKEAC 244 WQP++ + + +F PP+ + + Q+ + + ++K++C Sbjct: 890 WQPQASYSTASIFQPPQSQSSPFKMLQ-QQYQQRCQEDQKQSC 931 >AY058653-1|AAL13882.1| 1207|Drosophila melanogaster LD35434p protein. Length = 1207 Score = 27.5 bits (58), Expect = 8.7 Identities = 13/46 (28%), Positives = 23/46 (50%) Frame = +3 Query: 108 KMTGSQNQSFRFLKFSYHLKTLANTQNLLRTRRWKYLLGLMRKKRV 245 K+ QSFR K+ Y + A +++RW+ LL ++R+ Sbjct: 183 KLVVQDQQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFSTERRL 228 >AF254373-1|AAK53539.1| 2497|Drosophila melanogaster DOMINO B protein. Length = 2497 Score = 27.5 bits (58), Expect = 8.7 Identities = 13/46 (28%), Positives = 23/46 (50%) Frame = +3 Query: 108 KMTGSQNQSFRFLKFSYHLKTLANTQNLLRTRRWKYLLGLMRKKRV 245 K+ QSFR K+ Y + A +++RW+ LL ++R+ Sbjct: 1022 KLVVQDQQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFSTERRL 1067 >AF076776-1|AAF82185.1| 3201|Drosophila melanogaster helicase DOMINO A protein. Length = 3201 Score = 27.5 bits (58), Expect = 8.7 Identities = 13/46 (28%), Positives = 23/46 (50%) Frame = +3 Query: 108 KMTGSQNQSFRFLKFSYHLKTLANTQNLLRTRRWKYLLGLMRKKRV 245 K+ QSFR K+ Y + A +++RW+ LL ++R+ Sbjct: 1022 KLVVQDQQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFSTERRL 1067 >AE013599-3190|AAM70872.2| 2497|Drosophila melanogaster CG9696-PE, isoform E protein. Length = 2497 Score = 27.5 bits (58), Expect = 8.7 Identities = 13/46 (28%), Positives = 23/46 (50%) Frame = +3 Query: 108 KMTGSQNQSFRFLKFSYHLKTLANTQNLLRTRRWKYLLGLMRKKRV 245 K+ QSFR K+ Y + A +++RW+ LL ++R+ Sbjct: 1022 KLVVQDQQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFSTERRL 1067 >AE013599-3189|AAM70871.1| 3198|Drosophila melanogaster CG9696-PA, isoform A protein. Length = 3198 Score = 27.5 bits (58), Expect = 8.7 Identities = 13/46 (28%), Positives = 23/46 (50%) Frame = +3 Query: 108 KMTGSQNQSFRFLKFSYHLKTLANTQNLLRTRRWKYLLGLMRKKRV 245 K+ QSFR K+ Y + A +++RW+ LL ++R+ Sbjct: 1022 KLVVQDQQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFSTERRL 1067 >AE013599-3188|AAM70870.1| 3183|Drosophila melanogaster CG9696-PD, isoform D protein. Length = 3183 Score = 27.5 bits (58), Expect = 8.7 Identities = 13/46 (28%), Positives = 23/46 (50%) Frame = +3 Query: 108 KMTGSQNQSFRFLKFSYHLKTLANTQNLLRTRRWKYLLGLMRKKRV 245 K+ QSFR K+ Y + A +++RW+ LL ++R+ Sbjct: 1022 KLVVQDQQSFRRKKWKYLILDEAQNIKNFKSQRWQLLLNFSTERRL 1067 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 22,043,256 Number of Sequences: 53049 Number of extensions: 448571 Number of successful extensions: 1391 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 1299 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1364 length of database: 24,988,368 effective HSP length: 78 effective length of database: 20,850,546 effective search space used: 1438687674 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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