Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11h09f
         (443 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical p...    27   4.6  
U88175-4|AAB42279.1|  440|Caenorhabditis elegans Hypothetical pr...    27   4.6  
U64853-1|AAB04974.2|  517|Caenorhabditis elegans Hypothetical pr...    27   4.6  
AC024211-1|AAF36065.1|  252|Caenorhabditis elegans Hypothetical ...    27   6.1  
Z74473-2|CAA98949.2|  319|Caenorhabditis elegans Hypothetical pr...    27   8.1  
AC024214-10|AAF36080.1|  778|Caenorhabditis elegans Calpain fami...    27   8.1  

>Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical
           protein F44D12.1 protein.
          Length = 1034

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -3

Query: 192 VNSVCLPVSLGGKKT*ENGNFDSGCQSFSKATRTSLS 82
           ++ VCLP++ G      NG F + C+    A+R+ L+
Sbjct: 273 ISDVCLPLNYGVGLELSNGVFINSCEPNGAASRSGLA 309


>U88175-4|AAB42279.1|  440|Caenorhabditis elegans Hypothetical
           protein F21F3.2 protein.
          Length = 440

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 16/79 (20%), Positives = 35/79 (44%)
 Frame = +2

Query: 8   KMEDLSVEVYGENGAYYKAIVTDVLDNEVLVAFENDWQPESKFPFSQVFLPPKDTGKHTE 187
           K+E++ +   G     YK I+ +  + ++  A +  W  + +  F  +FL  ++  KH  
Sbjct: 22  KIEEVHLHSCGVFSNVYKGILREPYEKKI--AIKKSWPEKGERNFEFIFLTGRERAKHKN 79

Query: 188 FTENQEVEVFARSNEKEAC 244
                 +  F+ S + + C
Sbjct: 80  VI--HMIFAFSHSYDTKVC 96


>U64853-1|AAB04974.2|  517|Caenorhabditis elegans Hypothetical
           protein K11G9.3 protein.
          Length = 517

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 164 KDTGKHTEFTENQEVEVFARSNE 232
           KDTG H E T N+ +E ++R+ E
Sbjct: 326 KDTGDHFEATRNKIIEFYSRNVE 348


>AC024211-1|AAF36065.1|  252|Caenorhabditis elegans Hypothetical
           protein Y76B12C.4 protein.
          Length = 252

 Score = 27.1 bits (57), Expect = 6.1
 Identities = 15/43 (34%), Positives = 21/43 (48%)
 Frame = +2

Query: 110 NDWQPESKFPFSQVFLPPKDTGKHTEFTENQEVEVFARSNEKE 238
           +DW PE K    +V   P++  K  +  E +E E  A   EKE
Sbjct: 33  DDWAPEKKKRAKKVPSKPREGPKLIDEFEEKESEKEAAEKEKE 75


>Z74473-2|CAA98949.2|  319|Caenorhabditis elegans Hypothetical
           protein F56H9.1 protein.
          Length = 319

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 18/56 (32%), Positives = 23/56 (41%)
 Frame = -3

Query: 294 ITRKSPLIILIFAVHHPHASFSLDLANTSTSWFSVNSVCLPVSLGGKKT*ENGNFD 127
           IT    L+I     H P  S  + L   S SW +V  +   + L G     N NFD
Sbjct: 101 ITINRFLVIWFTPTHVPQYSHRITLGALSVSWITVTWLSTLIGLPGFD--NNNNFD 154


>AC024214-10|AAF36080.1|  778|Caenorhabditis elegans Calpain family
           protein 7 protein.
          Length = 778

 Score = 26.6 bits (56), Expect = 8.1
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -1

Query: 107 QRLLEPRCRARR*QWPYNKHHFHRTPRPTNPPFW 6
           QR L+ RC     Q+P N    +   RP  P  W
Sbjct: 302 QRCLDQRCLFEDPQFPANDSSLYYKTRPDEPIIW 335


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,208,165
Number of Sequences: 27780
Number of extensions: 230563
Number of successful extensions: 537
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 537
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 767282256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)