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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11h09f
         (443 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g70290.1 68414.m08087 trehalose-6-phosphate synthase, putativ...    29   1.9  
At1g23870.1 68414.m03011 glycosyl transferase family 20 protein ...    28   3.3  
At4g22140.1 68417.m03200 PHD finger family protein / bromo-adjac...    27   4.3  
At4g04260.1 68417.m00603 bromo-adjacent homology (BAH) domain-co...    27   4.3  
At1g47600.1 68414.m05285 glycosyl hydrolase family 1 protein con...    27   4.3  
At4g27570.1 68417.m03960 glycosyltransferase family protein cont...    27   5.7  
At2g19640.2 68415.m02295 SET domain-containing protein contains ...    27   7.5  
At2g03500.1 68415.m00309 myb family transcription factor contain...    27   7.5  
At1g80550.1 68414.m09443 pentatricopeptide (PPR) repeat-containi...    26   10.0 

>At1g70290.1 68414.m08087 trehalose-6-phosphate synthase, putative
           similar to Alpha,alpha-trehalose-phosphate synthase
           [UDP-forming] (EC 2.4.1.15) (Trehalose-6-phosphate
           synthase) from {Kluyveromyces lactis} SP|Q07158,
           {Saccharomyces cerevisiae} SP|Q00764; contains Pfam
           profiles PF00982: Glycosyltransferase family 20,
           PF02358: Trehalose-phosphatase
          Length = 856

 Score = 28.7 bits (61), Expect = 1.9
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = +2

Query: 104 FENDWQPESKFPFSQVFLPPKDTGKHTEFTENQEVEVFARSNEK 235
           FE  W  + K    Q+  P + +GK  E  + +  E   R NE+
Sbjct: 358 FETYWHLKGKVVLVQIVNPARSSGKDVEEAKRETYETARRINER 401


>At1g23870.1 68414.m03011 glycosyl transferase family 20 protein /
           trehalose-phosphatase family protein contains Pfam
           profile: PF02358 trehalose-phosphatase
          Length = 867

 Score = 27.9 bits (59), Expect = 3.3
 Identities = 13/44 (29%), Positives = 18/44 (40%)
 Frame = +2

Query: 104 FENDWQPESKFPFSQVFLPPKDTGKHTEFTENQEVEVFARSNEK 235
           FE  W    K    Q+  P + TGK  E  + +      R NE+
Sbjct: 360 FETYWHMRGKLVLIQIVNPARATGKDVEEAKKETYSTAKRINER 403


>At4g22140.1 68417.m03200 PHD finger family protein / bromo-adjacent
           homology (BAH) domain-containing protein contains Pfam
           domain, PF00628: PHD-finger and PF01426: BAH domain
          Length = 196

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 161 PKDTGKHTEFTENQEVEVFARSNEKEACGWW 253
           P D GK       +++E  AR+N K  C W+
Sbjct: 3   PSDAGKPPYVARVEKIEADARNNVKVHCRWY 33


>At4g04260.1 68417.m00603 bromo-adjacent homology (BAH)
           domain-containing protein similar to ES43 [Hordeum
           vulgare] GI:1345528; contains Pfam profile PF01426: BAH
           domain
          Length = 193

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 161 PKDTGKHTEFTENQEVEVFARSNEKEACGWW 253
           P D GK       +++E  AR+N K  C W+
Sbjct: 3   PSDAGKAPYVARVEKIEADARNNVKVHCRWY 33


>At1g47600.1 68414.m05285 glycosyl hydrolase family 1 protein
           contains Pfam PF00232 : Glycosyl hydrolase family 1
           domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
           similar to thioglucosidase (GI:871992) [Arabidopsis
           thaliana]
          Length = 511

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -1

Query: 131 LILAASHFQRLLEPRCRARR*QWPYNKHHFHRTPRPTNPPF 9
           L +  S  Q++  P C+A+      N H F+RT  P N  F
Sbjct: 16  LFVVVSSSQKVCNPECKAKEPFHCDNTHAFNRTGFPRNFTF 56


>At4g27570.1 68417.m03960 glycosyltransferase family protein
           contains Pfam profile: PF00201 UDP-glucoronosyl and
           UDP-glucosyl transferase
          Length = 453

 Score = 27.1 bits (57), Expect = 5.7
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -3

Query: 231 SLDLANTSTSWFSVNSVCLPVSLGGKKT*ENGN 133
           S+++A   T WFS  S+C  V+   K+  E GN
Sbjct: 381 SVEVAREETGWFSKESLCDAVNSVMKRDSELGN 413


>At2g19640.2 68415.m02295 SET domain-containing protein contains
           Pfam profile PF00856: SET domain
          Length = 398

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +2

Query: 194 ENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYL-EWDNCYTEIVP 337
           E +E+E     NE+E CG    +       +  + Y+ E +NC+  + P
Sbjct: 321 EQEEMEDSVGENEEEVCGNGVDDESNFPHAYFFVRYMCEKENCFGTLAP 369


>At2g03500.1 68415.m00309 myb family transcription factor contains
           Pfam profile: PF00249 myb-like DNA-binding domain
          Length = 432

 Score = 26.6 bits (56), Expect = 7.5
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 295 YHKEITPHHLDICSPPPTRF 236
           YH ++  HH +   PPP  F
Sbjct: 329 YHHQVHHHHTNTAGPPPPHF 348


>At1g80550.1 68414.m09443 pentatricopeptide (PPR) repeat-containing
           protein contains Pfam profile PF01535: PPR repeat
          Length = 448

 Score = 26.2 bits (55), Expect = 10.0
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
 Frame = +2

Query: 89  EVLVAFENDWQPESKFPFSQVFLPPKDTG-KHTEFTENQEVEVFARSNEKE 238
           E L  + NDWQ   +F F+ V    +++G +HT  T N+ +++  +  E E
Sbjct: 52  EALTCYSNDWQKALEF-FNWV---ERESGFRHTTETFNRVIDILGKYFEFE 98


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,547,982
Number of Sequences: 28952
Number of extensions: 214855
Number of successful extensions: 539
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 539
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 712739520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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