BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV11h09f (443 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g70290.1 68414.m08087 trehalose-6-phosphate synthase, putativ... 29 1.9 At1g23870.1 68414.m03011 glycosyl transferase family 20 protein ... 28 3.3 At4g22140.1 68417.m03200 PHD finger family protein / bromo-adjac... 27 4.3 At4g04260.1 68417.m00603 bromo-adjacent homology (BAH) domain-co... 27 4.3 At1g47600.1 68414.m05285 glycosyl hydrolase family 1 protein con... 27 4.3 At4g27570.1 68417.m03960 glycosyltransferase family protein cont... 27 5.7 At2g19640.2 68415.m02295 SET domain-containing protein contains ... 27 7.5 At2g03500.1 68415.m00309 myb family transcription factor contain... 27 7.5 At1g80550.1 68414.m09443 pentatricopeptide (PPR) repeat-containi... 26 10.0 >At1g70290.1 68414.m08087 trehalose-6-phosphate synthase, putative similar to Alpha,alpha-trehalose-phosphate synthase [UDP-forming] (EC 2.4.1.15) (Trehalose-6-phosphate synthase) from {Kluyveromyces lactis} SP|Q07158, {Saccharomyces cerevisiae} SP|Q00764; contains Pfam profiles PF00982: Glycosyltransferase family 20, PF02358: Trehalose-phosphatase Length = 856 Score = 28.7 bits (61), Expect = 1.9 Identities = 13/44 (29%), Positives = 20/44 (45%) Frame = +2 Query: 104 FENDWQPESKFPFSQVFLPPKDTGKHTEFTENQEVEVFARSNEK 235 FE W + K Q+ P + +GK E + + E R NE+ Sbjct: 358 FETYWHLKGKVVLVQIVNPARSSGKDVEEAKRETYETARRINER 401 >At1g23870.1 68414.m03011 glycosyl transferase family 20 protein / trehalose-phosphatase family protein contains Pfam profile: PF02358 trehalose-phosphatase Length = 867 Score = 27.9 bits (59), Expect = 3.3 Identities = 13/44 (29%), Positives = 18/44 (40%) Frame = +2 Query: 104 FENDWQPESKFPFSQVFLPPKDTGKHTEFTENQEVEVFARSNEK 235 FE W K Q+ P + TGK E + + R NE+ Sbjct: 360 FETYWHMRGKLVLIQIVNPARATGKDVEEAKKETYSTAKRINER 403 >At4g22140.1 68417.m03200 PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein contains Pfam domain, PF00628: PHD-finger and PF01426: BAH domain Length = 196 Score = 27.5 bits (58), Expect = 4.3 Identities = 11/31 (35%), Positives = 16/31 (51%) Frame = +2 Query: 161 PKDTGKHTEFTENQEVEVFARSNEKEACGWW 253 P D GK +++E AR+N K C W+ Sbjct: 3 PSDAGKPPYVARVEKIEADARNNVKVHCRWY 33 >At4g04260.1 68417.m00603 bromo-adjacent homology (BAH) domain-containing protein similar to ES43 [Hordeum vulgare] GI:1345528; contains Pfam profile PF01426: BAH domain Length = 193 Score = 27.5 bits (58), Expect = 4.3 Identities = 11/31 (35%), Positives = 16/31 (51%) Frame = +2 Query: 161 PKDTGKHTEFTENQEVEVFARSNEKEACGWW 253 P D GK +++E AR+N K C W+ Sbjct: 3 PSDAGKAPYVARVEKIEADARNNVKVHCRWY 33 >At1g47600.1 68414.m05285 glycosyl hydrolase family 1 protein contains Pfam PF00232 : Glycosyl hydrolase family 1 domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase; similar to thioglucosidase (GI:871992) [Arabidopsis thaliana] Length = 511 Score = 27.5 bits (58), Expect = 4.3 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = -1 Query: 131 LILAASHFQRLLEPRCRARR*QWPYNKHHFHRTPRPTNPPF 9 L + S Q++ P C+A+ N H F+RT P N F Sbjct: 16 LFVVVSSSQKVCNPECKAKEPFHCDNTHAFNRTGFPRNFTF 56 >At4g27570.1 68417.m03960 glycosyltransferase family protein contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase Length = 453 Score = 27.1 bits (57), Expect = 5.7 Identities = 13/33 (39%), Positives = 19/33 (57%) Frame = -3 Query: 231 SLDLANTSTSWFSVNSVCLPVSLGGKKT*ENGN 133 S+++A T WFS S+C V+ K+ E GN Sbjct: 381 SVEVAREETGWFSKESLCDAVNSVMKRDSELGN 413 >At2g19640.2 68415.m02295 SET domain-containing protein contains Pfam profile PF00856: SET domain Length = 398 Score = 26.6 bits (56), Expect = 7.5 Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 1/49 (2%) Frame = +2 Query: 194 ENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYL-EWDNCYTEIVP 337 E +E+E NE+E CG + + + Y+ E +NC+ + P Sbjct: 321 EQEEMEDSVGENEEEVCGNGVDDESNFPHAYFFVRYMCEKENCFGTLAP 369 >At2g03500.1 68415.m00309 myb family transcription factor contains Pfam profile: PF00249 myb-like DNA-binding domain Length = 432 Score = 26.6 bits (56), Expect = 7.5 Identities = 8/20 (40%), Positives = 11/20 (55%) Frame = -2 Query: 295 YHKEITPHHLDICSPPPTRF 236 YH ++ HH + PPP F Sbjct: 329 YHHQVHHHHTNTAGPPPPHF 348 >At1g80550.1 68414.m09443 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat Length = 448 Score = 26.2 bits (55), Expect = 10.0 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%) Frame = +2 Query: 89 EVLVAFENDWQPESKFPFSQVFLPPKDTG-KHTEFTENQEVEVFARSNEKE 238 E L + NDWQ +F F+ V +++G +HT T N+ +++ + E E Sbjct: 52 EALTCYSNDWQKALEF-FNWV---ERESGFRHTTETFNRVIDILGKYFEFE 98 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 10,547,982 Number of Sequences: 28952 Number of extensions: 214855 Number of successful extensions: 539 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 524 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 539 length of database: 12,070,560 effective HSP length: 75 effective length of database: 9,899,160 effective search space used: 712739520 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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