Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11h09f
(443 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g70290.1 68414.m08087 trehalose-6-phosphate synthase, putativ... 29 1.9
At1g23870.1 68414.m03011 glycosyl transferase family 20 protein ... 28 3.3
At4g22140.1 68417.m03200 PHD finger family protein / bromo-adjac... 27 4.3
At4g04260.1 68417.m00603 bromo-adjacent homology (BAH) domain-co... 27 4.3
At1g47600.1 68414.m05285 glycosyl hydrolase family 1 protein con... 27 4.3
At4g27570.1 68417.m03960 glycosyltransferase family protein cont... 27 5.7
At2g19640.2 68415.m02295 SET domain-containing protein contains ... 27 7.5
At2g03500.1 68415.m00309 myb family transcription factor contain... 27 7.5
At1g80550.1 68414.m09443 pentatricopeptide (PPR) repeat-containi... 26 10.0
>At1g70290.1 68414.m08087 trehalose-6-phosphate synthase, putative
similar to Alpha,alpha-trehalose-phosphate synthase
[UDP-forming] (EC 2.4.1.15) (Trehalose-6-phosphate
synthase) from {Kluyveromyces lactis} SP|Q07158,
{Saccharomyces cerevisiae} SP|Q00764; contains Pfam
profiles PF00982: Glycosyltransferase family 20,
PF02358: Trehalose-phosphatase
Length = 856
Score = 28.7 bits (61), Expect = 1.9
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +2
Query: 104 FENDWQPESKFPFSQVFLPPKDTGKHTEFTENQEVEVFARSNEK 235
FE W + K Q+ P + +GK E + + E R NE+
Sbjct: 358 FETYWHLKGKVVLVQIVNPARSSGKDVEEAKRETYETARRINER 401
>At1g23870.1 68414.m03011 glycosyl transferase family 20 protein /
trehalose-phosphatase family protein contains Pfam
profile: PF02358 trehalose-phosphatase
Length = 867
Score = 27.9 bits (59), Expect = 3.3
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = +2
Query: 104 FENDWQPESKFPFSQVFLPPKDTGKHTEFTENQEVEVFARSNEK 235
FE W K Q+ P + TGK E + + R NE+
Sbjct: 360 FETYWHMRGKLVLIQIVNPARATGKDVEEAKKETYSTAKRINER 403
>At4g22140.1 68417.m03200 PHD finger family protein / bromo-adjacent
homology (BAH) domain-containing protein contains Pfam
domain, PF00628: PHD-finger and PF01426: BAH domain
Length = 196
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 161 PKDTGKHTEFTENQEVEVFARSNEKEACGWW 253
P D GK +++E AR+N K C W+
Sbjct: 3 PSDAGKPPYVARVEKIEADARNNVKVHCRWY 33
>At4g04260.1 68417.m00603 bromo-adjacent homology (BAH)
domain-containing protein similar to ES43 [Hordeum
vulgare] GI:1345528; contains Pfam profile PF01426: BAH
domain
Length = 193
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 161 PKDTGKHTEFTENQEVEVFARSNEKEACGWW 253
P D GK +++E AR+N K C W+
Sbjct: 3 PSDAGKAPYVARVEKIEADARNNVKVHCRWY 33
>At1g47600.1 68414.m05285 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to thioglucosidase (GI:871992) [Arabidopsis
thaliana]
Length = 511
Score = 27.5 bits (58), Expect = 4.3
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 131 LILAASHFQRLLEPRCRARR*QWPYNKHHFHRTPRPTNPPF 9
L + S Q++ P C+A+ N H F+RT P N F
Sbjct: 16 LFVVVSSSQKVCNPECKAKEPFHCDNTHAFNRTGFPRNFTF 56
>At4g27570.1 68417.m03960 glycosyltransferase family protein
contains Pfam profile: PF00201 UDP-glucoronosyl and
UDP-glucosyl transferase
Length = 453
Score = 27.1 bits (57), Expect = 5.7
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -3
Query: 231 SLDLANTSTSWFSVNSVCLPVSLGGKKT*ENGN 133
S+++A T WFS S+C V+ K+ E GN
Sbjct: 381 SVEVAREETGWFSKESLCDAVNSVMKRDSELGN 413
>At2g19640.2 68415.m02295 SET domain-containing protein contains
Pfam profile PF00856: SET domain
Length = 398
Score = 26.6 bits (56), Expect = 7.5
Identities = 13/49 (26%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +2
Query: 194 ENQEVEVFARSNEKEACGWWTANIKMMRGDFLVIEYL-EWDNCYTEIVP 337
E +E+E NE+E CG + + + Y+ E +NC+ + P
Sbjct: 321 EQEEMEDSVGENEEEVCGNGVDDESNFPHAYFFVRYMCEKENCFGTLAP 369
>At2g03500.1 68415.m00309 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 432
Score = 26.6 bits (56), Expect = 7.5
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 295 YHKEITPHHLDICSPPPTRF 236
YH ++ HH + PPP F
Sbjct: 329 YHHQVHHHHTNTAGPPPPHF 348
>At1g80550.1 68414.m09443 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 448
Score = 26.2 bits (55), Expect = 10.0
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +2
Query: 89 EVLVAFENDWQPESKFPFSQVFLPPKDTG-KHTEFTENQEVEVFARSNEKE 238
E L + NDWQ +F F+ V +++G +HT T N+ +++ + E E
Sbjct: 52 EALTCYSNDWQKALEF-FNWV---ERESGFRHTTETFNRVIDILGKYFEFE 98
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,547,982
Number of Sequences: 28952
Number of extensions: 214855
Number of successful extensions: 539
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 539
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 712739520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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