Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11h04r
(719 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR456886-1|CAG33167.1| 308|Homo sapiens COPE protein. 182 2e-45
BC017285-1|AAH17285.1| 308|Homo sapiens coatomer protein comple... 182 2e-45
BC007250-1|AAH07250.1| 308|Homo sapiens coatomer protein comple... 182 2e-45
BC003155-1|AAH03155.1| 308|Homo sapiens coatomer protein comple... 182 2e-45
AJ249366-1|CAB55628.1| 308|Homo sapiens epsilon-COP protein pro... 182 2e-45
AF092438-1|AAP97213.1| 307|Homo sapiens epsilon-COP protein. 182 2e-45
AC005197-2|AAC24612.1| 245|Homo sapiens COPE_HUMAN protein. 182 2e-45
AK222584-1|BAD96304.1| 308|Homo sapiens epsilon subunit of coat... 181 2e-45
AJ131182-1|CAA10316.1| 308|Homo sapiens Epsilon COP protein. 181 3e-45
AC002985-1|AAB81543.1| 147|Homo sapiens epsilon-COP protein. 60 6e-09
BC126459-1|AAI26460.1| 257|Homo sapiens chromosome 10 open read... 30 7.3
AL121928-10|CAI12523.1| 257|Homo sapiens novel protein protein. 30 7.3
AK024342-1|BAB14892.1| 257|Homo sapiens protein ( Homo sapiens ... 30 7.3
AF010315-1|AAC39533.1| 177|Homo sapiens Pig11 protein. 30 9.6
>CR456886-1|CAG33167.1| 308|Homo sapiens COPE protein.
Length = 308
Score = 182 bits (442), Expect = 2e-45
Identities = 91/220 (41%), Positives = 134/220 (60%)
Frame = -1
Query: 713 DYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLEL 534
DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH +SLE
Sbjct: 89 DYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLEC 148
Query: 533 RAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHYSVMEL 354
A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+Y E+
Sbjct: 149 TAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEM 208
Query: 353 SEXXXXXXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXXXXXXXGKPP 174
++ G WE AE L +A + GKPP
Sbjct: 209 AD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQHLGKPP 267
Query: 173 EVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPS 54
EV+ RYL+QL D+H HPF+KEY+AK ++F RL QY PS
Sbjct: 268 EVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAPS 307
>BC017285-1|AAH17285.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 182 bits (442), Expect = 2e-45
Identities = 91/220 (41%), Positives = 134/220 (60%)
Frame = -1
Query: 713 DYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLEL 534
DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH +SLE
Sbjct: 89 DYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLEC 148
Query: 533 RAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHYSVMEL 354
A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+Y E+
Sbjct: 149 TAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEM 208
Query: 353 SEXXXXXXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXXXXXXXGKPP 174
++ G WE AE L +A + GKPP
Sbjct: 209 AD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQHLGKPP 267
Query: 173 EVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPS 54
EV+ RYL+QL D+H HPF+KEY+AK ++F RL QY PS
Sbjct: 268 EVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAPS 307
>BC007250-1|AAH07250.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 182 bits (442), Expect = 2e-45
Identities = 91/220 (41%), Positives = 134/220 (60%)
Frame = -1
Query: 713 DYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLEL 534
DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH +SLE
Sbjct: 89 DYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLEC 148
Query: 533 RAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHYSVMEL 354
A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+Y E+
Sbjct: 149 TAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEM 208
Query: 353 SEXXXXXXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXXXXXXXGKPP 174
++ G WE AE L +A + GKPP
Sbjct: 209 AD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQHLGKPP 267
Query: 173 EVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPS 54
EV+ RYL+QL D+H HPF+KEY+AK ++F RL QY PS
Sbjct: 268 EVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAPS 307
>BC003155-1|AAH03155.1| 308|Homo sapiens coatomer protein complex,
subunit epsilon protein.
Length = 308
Score = 182 bits (442), Expect = 2e-45
Identities = 91/220 (41%), Positives = 134/220 (60%)
Frame = -1
Query: 713 DYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLEL 534
DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH +SLE
Sbjct: 89 DYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLEC 148
Query: 533 RAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHYSVMEL 354
A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+Y E+
Sbjct: 149 TAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEM 208
Query: 353 SEXXXXXXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXXXXXXXGKPP 174
++ G WE AE L +A + GKPP
Sbjct: 209 AD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQHLGKPP 267
Query: 173 EVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPS 54
EV+ RYL+QL D+H HPF+KEY+AK ++F RL QY PS
Sbjct: 268 EVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAPS 307
>AJ249366-1|CAB55628.1| 308|Homo sapiens epsilon-COP protein
protein.
Length = 308
Score = 182 bits (442), Expect = 2e-45
Identities = 91/220 (41%), Positives = 134/220 (60%)
Frame = -1
Query: 713 DYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLEL 534
DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH +SLE
Sbjct: 89 DYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLEC 148
Query: 533 RAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHYSVMEL 354
A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+Y E+
Sbjct: 149 TAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEM 208
Query: 353 SEXXXXXXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXXXXXXXGKPP 174
++ G WE AE L +A + GKPP
Sbjct: 209 AD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQHLGKPP 267
Query: 173 EVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPS 54
EV+ RYL+QL D+H HPF+KEY+AK ++F RL QY PS
Sbjct: 268 EVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAPS 307
>AF092438-1|AAP97213.1| 307|Homo sapiens epsilon-COP protein.
Length = 307
Score = 182 bits (442), Expect = 2e-45
Identities = 91/220 (41%), Positives = 134/220 (60%)
Frame = -1
Query: 713 DYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLEL 534
DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH +SLE
Sbjct: 88 DYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLEC 147
Query: 533 RAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHYSVMEL 354
A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+Y E+
Sbjct: 148 TAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEM 207
Query: 353 SEXXXXXXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXXXXXXXGKPP 174
++ G WE AE L +A + GKPP
Sbjct: 208 AD-KCSPTLLLLNGQAACHIAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQHLGKPP 266
Query: 173 EVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPS 54
EV+ RYL+QL D+H HPF+KEY+AK ++F RL QY PS
Sbjct: 267 EVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAPS 306
>AC005197-2|AAC24612.1| 245|Homo sapiens COPE_HUMAN protein.
Length = 245
Score = 182 bits (442), Expect = 2e-45
Identities = 91/220 (41%), Positives = 134/220 (60%)
Frame = -1
Query: 713 DYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLEL 534
DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH +SLE
Sbjct: 26 DYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLEC 85
Query: 533 RAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHYSVMEL 354
A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+Y E+
Sbjct: 86 TAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEM 145
Query: 353 SEXXXXXXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXXXXXXXGKPP 174
++ G WE AE L +A + GKPP
Sbjct: 146 AD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQHLGKPP 204
Query: 173 EVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPS 54
EV+ RYL+QL D+H HPF+KEY+AK ++F RL QY PS
Sbjct: 205 EVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAPS 244
>AK222584-1|BAD96304.1| 308|Homo sapiens epsilon subunit of
coatomer protein complex isoform a variant protein.
Length = 308
Score = 181 bits (441), Expect = 2e-45
Identities = 91/220 (41%), Positives = 134/220 (60%)
Frame = -1
Query: 713 DYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLEL 534
DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH +SLE
Sbjct: 89 DYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLEC 148
Query: 533 RAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHYSVMEL 354
A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+Y E+
Sbjct: 149 TAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEM 208
Query: 353 SEXXXXXXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXXXXXXXGKPP 174
++ G WE AE L +A + GKPP
Sbjct: 209 AD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSCYPETLVNLIVLSQHLGKPP 267
Query: 173 EVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPS 54
EV+ RYL+QL D+H HPF+KEY+AK ++F RL QY PS
Sbjct: 268 EVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAPS 307
>AJ131182-1|CAA10316.1| 308|Homo sapiens Epsilon COP protein.
Length = 308
Score = 181 bits (440), Expect = 3e-45
Identities = 91/220 (41%), Positives = 134/220 (60%)
Frame = -1
Query: 713 DYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLEL 534
DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH +SLE
Sbjct: 89 DYLAHESRRDSIVAELDREMSRSVDVTNITFLLMAASIYLHDQNPDAALRALHQGDSLEC 148
Query: 533 RAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHYSVMEL 354
A T+Q LL ++R DLARK+LK +QD+++D TLTQLA AW++L GG +QDA+Y E+
Sbjct: 149 TAMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEM 208
Query: 353 SEXXXXXXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXXXXXXXGKPP 174
++ G WE AE L +A + GKPP
Sbjct: 209 AD-KCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQHLGKPP 267
Query: 173 EVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPS 54
EV+ RYL+QL D+H HPF+KEY+AK ++F RL QY PS
Sbjct: 268 EVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYAPS 307
>AC002985-1|AAB81543.1| 147|Homo sapiens epsilon-COP protein.
Length = 147
Score = 60.5 bits (140), Expect = 6e-09
Identities = 24/59 (40%), Positives = 43/59 (72%)
Frame = -1
Query: 713 DYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLE 537
DYL ++ + +IVA++D +++ +++N FL++AA+IY H+ N +AAL+ LH +SLE
Sbjct: 89 DYLAHESRRDSIVAELDREMSRSVDVTNTTFLLMAASIYLHDQNPDAALRALHQGDSLE 147
>BC126459-1|AAI26460.1| 257|Homo sapiens chromosome 10 open reading
frame 95 protein.
Length = 257
Score = 30.3 bits (65), Expect = 7.3
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = -2
Query: 226 PTCCSALRSPRRISGNHRR-CRP-DTWP 149
P C+A R P R SG RR C P TWP
Sbjct: 46 PCMCTAGRRPNRASGRRRRSCSPAPTWP 73
>AL121928-10|CAI12523.1| 257|Homo sapiens novel protein protein.
Length = 257
Score = 30.3 bits (65), Expect = 7.3
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = -2
Query: 226 PTCCSALRSPRRISGNHRR-CRP-DTWP 149
P C+A R P R SG RR C P TWP
Sbjct: 46 PCMCTAGRRPNRASGRRRRSCSPAPTWP 73
>AK024342-1|BAB14892.1| 257|Homo sapiens protein ( Homo sapiens
cDNA FLJ14280 fis, clone PLACE1005584, weakly similar to
TRANS-ACTING TRANSCRIPTIONAL PROTEIN ICP0. ).
Length = 257
Score = 30.3 bits (65), Expect = 7.3
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
Frame = -2
Query: 226 PTCCSALRSPRRISGNHRR-CRP-DTWP 149
P C+A R P R SG RR C P TWP
Sbjct: 46 PCMCTAGRRPNRASGRRRRSCSPAPTWP 73
>AF010315-1|AAC39533.1| 177|Homo sapiens Pig11 protein.
Length = 177
Score = 29.9 bits (64), Expect = 9.6
Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = -2
Query: 244 PAPHSTPTCCSALRSPRRISGNHR-RCRP 161
P P P CC AL PR + +HR C P
Sbjct: 127 PLPKELPPCCRALVWPRATTASHRHHCLP 155
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,460,932
Number of Sequences: 237096
Number of extensions: 2010863
Number of successful extensions: 8433
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 8163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8423
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8455186714
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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