Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11h04r
         (719 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF145691-1|AAD38666.1|  306|Drosophila melanogaster BcDNA.LD2988...   111   1e-24
AE014134-1103|AAF52392.1|  306|Drosophila melanogaster CG9543-PA...   111   1e-24
AY094852-1|AAM11205.1|  638|Drosophila melanogaster RE12569p pro...    29   6.4  
AE013599-2714|AAF57677.1|  638|Drosophila melanogaster CG10924-P...    29   6.4  

>AF145691-1|AAD38666.1|  306|Drosophila melanogaster BcDNA.LD29885
           protein.
          Length = 306

 Score =  111 bits (266), Expect = 1e-24
 Identities = 67/195 (34%), Positives = 94/195 (48%)
 Frame = -1

Query: 647 GTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLK 468
           G E    I+ +  A +Y H+  +E ALKILH + +LE  A ++QCLL + R DLA++ + 
Sbjct: 102 GEEDETNIWHLATAIVYCHDGQFENALKILHGSTNLESMALSVQCLLRLQRVDLAKQLVA 161

Query: 467 LLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXX 288
            +Q+I DD TLTQLAQAW+ L QG   +QDA +   E  E                    
Sbjct: 162 KMQEISDDATLTQLAQAWVALAQGTEQMQDAFHIYQEFCE-KFKPTPALLNGQAVVHLGL 220

Query: 287 GMWEEAEQQLTDAASRAPQXXXXXXXXXXXXXXXGKPPEVSARYLAQLLDSHPQHPFVKE 108
             +EEA+  L ++  +                  GKP E   R L QL   +P+  FV +
Sbjct: 221 ERYEEADSVLRESLLKKHNDYDTLINLMVHAHLTGKPTEAITRNLEQLRQFYPKSDFVTD 280

Query: 107 YKAKTDEFQRLAAQY 63
              K+ EF RL  QY
Sbjct: 281 LDKKSAEFDRLCLQY 295


>AE014134-1103|AAF52392.1|  306|Drosophila melanogaster CG9543-PA
           protein.
          Length = 306

 Score =  111 bits (266), Expect = 1e-24
 Identities = 67/195 (34%), Positives = 94/195 (48%)
 Frame = -1

Query: 647 GTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLK 468
           G E    I+ +  A +Y H+  +E ALKILH + +LE  A ++QCLL + R DLA++ + 
Sbjct: 102 GEEDETNIWHLATAIVYCHDGQFENALKILHGSTNLESMALSVQCLLRLQRVDLAKQLVA 161

Query: 467 LLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHYSVMELSEXXXXXXXXXXXXXXXXXXXX 288
            +Q+I DD TLTQLAQAW+ L QG   +QDA +   E  E                    
Sbjct: 162 KMQEISDDATLTQLAQAWVALAQGTEQMQDAFHIYQEFCE-KFKPTPALLNGQAVVHLGL 220

Query: 287 GMWEEAEQQLTDAASRAPQXXXXXXXXXXXXXXXGKPPEVSARYLAQLLDSHPQHPFVKE 108
             +EEA+  L ++  +                  GKP E   R L QL   +P+  FV +
Sbjct: 221 ERYEEADSVLRESLLKKHNDYDTLINLMVHAHLTGKPTEAITRNLEQLRQFYPKSDFVTD 280

Query: 107 YKAKTDEFQRLAAQY 63
              K+ EF RL  QY
Sbjct: 281 LDKKSAEFDRLCLQY 295


>AY094852-1|AAM11205.1|  638|Drosophila melanogaster RE12569p
           protein.
          Length = 638

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +2

Query: 59  VGTARPDVGTRPSWPCIPSR 118
           VGT +  V   PSWPC P R
Sbjct: 215 VGTPKSGVQAMPSWPCDPER 234


>AE013599-2714|AAF57677.1|  638|Drosophila melanogaster CG10924-PA
           protein.
          Length = 638

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = +2

Query: 59  VGTARPDVGTRPSWPCIPSR 118
           VGT +  V   PSWPC P R
Sbjct: 215 VGTPKSGVQAMPSWPCDPER 234


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,112,419
Number of Sequences: 53049
Number of extensions: 605526
Number of successful extensions: 1995
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1886
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1995
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3211306956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)