BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV11h04r (719 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z93382-3|CAB07613.1| 292|Caenorhabditis elegans Hypothetical pr... 84 1e-16 Z50858-2|CAD44134.1| 467|Caenorhabditis elegans Hypothetical pr... 33 0.16 Z50858-1|CAA90721.1| 453|Caenorhabditis elegans Hypothetical pr... 33 0.16 AF408757-1|AAO27836.1| 456|Caenorhabditis elegans nucleobindin ... 33 0.16 Z49908-7|CAA90099.1| 294|Caenorhabditis elegans Hypothetical pr... 31 1.1 AL021175-2|CAA15966.1| 322|Caenorhabditis elegans Hypothetical ... 28 5.8 U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical pr... 28 7.7 U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical pr... 28 7.7 >Z93382-3|CAB07613.1| 292|Caenorhabditis elegans Hypothetical protein F45G2.4 protein. Length = 292 Score = 83.8 bits (198), Expect = 1e-16 Identities = 58/209 (27%), Positives = 94/209 (44%) Frame = -1 Query: 695 ANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELRAFTLQ 516 A K I+A++ VA + +EI ++AATI D + A + + E LE RA + Sbjct: 82 AAKKKILAEVQEEVAS-RNIKSEIAAVLAATILNEADLSQDAFRAVSRFEGLEARASKVF 140 Query: 515 CLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHYSVMELSEXXXX 336 L+ MN+ LA ++K + I++D TL+QLA A + ++DA Y E+S+ Sbjct: 141 ILIKMNKRKLAIGEVKKMNQIDEDATLSQLANALVTSFGASGKVKDALYIYSEMSDKYGR 200 Query: 335 XXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXXXXXXXGKPPEVSARY 156 + AE+ L A R + K +V R+ Sbjct: 201 TTDLEMHQAVVSILTQD-YAAAEELLESALERDNKDADVLINSIVSAQLNEKDDDVVERF 259 Query: 155 LAQLLDSHPQHPFVKEYKAKTDEFQRLAA 69 ++QL HP HP+V ++ K EF R+A+ Sbjct: 260 ISQLKHEHPNHPWVIDFNEKEAEFDRVAS 288 >Z50858-2|CAD44134.1| 467|Caenorhabditis elegans Hypothetical protein F44A6.1b protein. Length = 467 Score = 33.5 bits (73), Expect = 0.16 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = -1 Query: 182 KPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPSV 51 K ++ A +A +D PQ F K +KAK DE +RL Q + + Sbjct: 96 KEEDIKAGNIADHIDDLPQEVFDKLHKAKFDEIERLRKQIEEQI 139 >Z50858-1|CAA90721.1| 453|Caenorhabditis elegans Hypothetical protein F44A6.1a protein. Length = 453 Score = 33.5 bits (73), Expect = 0.16 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = -1 Query: 182 KPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPSV 51 K ++ A +A +D PQ F K +KAK DE +RL Q + + Sbjct: 96 KEEDIKAGNIADHIDDLPQEVFDKLHKAKFDEIERLRKQIEEQI 139 >AF408757-1|AAO27836.1| 456|Caenorhabditis elegans nucleobindin protein. Length = 456 Score = 33.5 bits (73), Expect = 0.16 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = -1 Query: 182 KPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPSV 51 K ++ A +A +D PQ F K +KAK DE +RL Q + + Sbjct: 99 KEEDIKAGNIADHIDDLPQEVFDKLHKAKFDEIERLRKQIEEQI 142 >Z49908-7|CAA90099.1| 294|Caenorhabditis elegans Hypothetical protein C07E3.8 protein. Length = 294 Score = 30.7 bits (66), Expect = 1.1 Identities = 14/32 (43%), Positives = 20/32 (62%) Frame = -1 Query: 590 EDNYEAALKILHNAESLELRAFTLQCLLAMNR 495 E +E + H+ ESLE+ +FT+ CLL NR Sbjct: 117 EGVFETPFEKPHHFESLEITSFTIDCLLYGNR 148 >AL021175-2|CAA15966.1| 322|Caenorhabditis elegans Hypothetical protein Y6E2A.2 protein. Length = 322 Score = 28.3 bits (60), Expect = 5.8 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -1 Query: 152 AQLLDSHPQHPFVKEYKAKTDEFQRLAAQY 63 +QL D H F+K Y K D+F +AQY Sbjct: 158 SQLKDLHVYPEFLKSYCLKPDDFAYASAQY 187 >U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical protein F41H10.3b protein. Length = 1005 Score = 27.9 bits (59), Expect = 7.7 Identities = 14/55 (25%), Positives = 28/55 (50%) Frame = -1 Query: 641 ELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARK 477 E +NE+F ++A+ I Y DN+ A++ ++L + Q L + + +K Sbjct: 118 EDANELFRLIASCIIYSNDNWRASIDKSTLVDTLSMNILEKQRLKNLKQESSEQK 172 >U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical protein F41H10.3a protein. Length = 1140 Score = 27.9 bits (59), Expect = 7.7 Identities = 14/55 (25%), Positives = 28/55 (50%) Frame = -1 Query: 641 ELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARK 477 E +NE+F ++A+ I Y DN+ A++ ++L + Q L + + +K Sbjct: 118 EDANELFRLIASCIIYSNDNWRASIDKSTLVDTLSMNILEKQRLKNLKQESSEQK 172 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,767,083 Number of Sequences: 27780 Number of extensions: 285699 Number of successful extensions: 847 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 783 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 845 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1687292480 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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