Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11h04r
         (719 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93382-3|CAB07613.1|  292|Caenorhabditis elegans Hypothetical pr...    84   1e-16
Z50858-2|CAD44134.1|  467|Caenorhabditis elegans Hypothetical pr...    33   0.16 
Z50858-1|CAA90721.1|  453|Caenorhabditis elegans Hypothetical pr...    33   0.16 
AF408757-1|AAO27836.1|  456|Caenorhabditis elegans nucleobindin ...    33   0.16 
Z49908-7|CAA90099.1|  294|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AL021175-2|CAA15966.1|  322|Caenorhabditis elegans Hypothetical ...    28   5.8  
U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical pr...    28   7.7  
U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical pr...    28   7.7  

>Z93382-3|CAB07613.1|  292|Caenorhabditis elegans Hypothetical
           protein F45G2.4 protein.
          Length = 292

 Score = 83.8 bits (198), Expect = 1e-16
 Identities = 58/209 (27%), Positives = 94/209 (44%)
 Frame = -1

Query: 695 ANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELRAFTLQ 516
           A K  I+A++   VA    + +EI  ++AATI    D  + A + +   E LE RA  + 
Sbjct: 82  AAKKKILAEVQEEVAS-RNIKSEIAAVLAATILNEADLSQDAFRAVSRFEGLEARASKVF 140

Query: 515 CLLAMNRPDLARKQLKLLQDIEDDGTLTQLAQAWLNLIQGGPGIQDAHYSVMELSEXXXX 336
            L+ MN+  LA  ++K +  I++D TL+QLA A +        ++DA Y   E+S+    
Sbjct: 141 ILIKMNKRKLAIGEVKKMNQIDEDATLSQLANALVTSFGASGKVKDALYIYSEMSDKYGR 200

Query: 335 XXXXXXXXXXXXXXXXGMWEEAEQQLTDAASRAPQXXXXXXXXXXXXXXXGKPPEVSARY 156
                             +  AE+ L  A  R  +                K  +V  R+
Sbjct: 201 TTDLEMHQAVVSILTQD-YAAAEELLESALERDNKDADVLINSIVSAQLNEKDDDVVERF 259

Query: 155 LAQLLDSHPQHPFVKEYKAKTDEFQRLAA 69
           ++QL   HP HP+V ++  K  EF R+A+
Sbjct: 260 ISQLKHEHPNHPWVIDFNEKEAEFDRVAS 288


>Z50858-2|CAD44134.1|  467|Caenorhabditis elegans Hypothetical
           protein F44A6.1b protein.
          Length = 467

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -1

Query: 182 KPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPSV 51
           K  ++ A  +A  +D  PQ  F K +KAK DE +RL  Q +  +
Sbjct: 96  KEEDIKAGNIADHIDDLPQEVFDKLHKAKFDEIERLRKQIEEQI 139


>Z50858-1|CAA90721.1|  453|Caenorhabditis elegans Hypothetical
           protein F44A6.1a protein.
          Length = 453

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -1

Query: 182 KPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPSV 51
           K  ++ A  +A  +D  PQ  F K +KAK DE +RL  Q +  +
Sbjct: 96  KEEDIKAGNIADHIDDLPQEVFDKLHKAKFDEIERLRKQIEEQI 139


>AF408757-1|AAO27836.1|  456|Caenorhabditis elegans nucleobindin
           protein.
          Length = 456

 Score = 33.5 bits (73), Expect = 0.16
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = -1

Query: 182 KPPEVSARYLAQLLDSHPQHPFVKEYKAKTDEFQRLAAQYQPSV 51
           K  ++ A  +A  +D  PQ  F K +KAK DE +RL  Q +  +
Sbjct: 99  KEEDIKAGNIADHIDDLPQEVFDKLHKAKFDEIERLRKQIEEQI 142


>Z49908-7|CAA90099.1|  294|Caenorhabditis elegans Hypothetical
           protein C07E3.8 protein.
          Length = 294

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -1

Query: 590 EDNYEAALKILHNAESLELRAFTLQCLLAMNR 495
           E  +E   +  H+ ESLE+ +FT+ CLL  NR
Sbjct: 117 EGVFETPFEKPHHFESLEITSFTIDCLLYGNR 148


>AL021175-2|CAA15966.1|  322|Caenorhabditis elegans Hypothetical
           protein Y6E2A.2 protein.
          Length = 322

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -1

Query: 152 AQLLDSHPQHPFVKEYKAKTDEFQRLAAQY 63
           +QL D H    F+K Y  K D+F   +AQY
Sbjct: 158 SQLKDLHVYPEFLKSYCLKPDDFAYASAQY 187


>U61954-8|AAM98018.1| 1005|Caenorhabditis elegans Hypothetical
           protein F41H10.3b protein.
          Length = 1005

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 14/55 (25%), Positives = 28/55 (50%)
 Frame = -1

Query: 641 ELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARK 477
           E +NE+F ++A+ I Y  DN+ A++      ++L +     Q L  + +    +K
Sbjct: 118 EDANELFRLIASCIIYSNDNWRASIDKSTLVDTLSMNILEKQRLKNLKQESSEQK 172


>U61954-7|AAK29803.1| 1140|Caenorhabditis elegans Hypothetical
           protein F41H10.3a protein.
          Length = 1140

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 14/55 (25%), Positives = 28/55 (50%)
 Frame = -1

Query: 641 ELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARK 477
           E +NE+F ++A+ I Y  DN+ A++      ++L +     Q L  + +    +K
Sbjct: 118 EDANELFRLIASCIIYSNDNWRASIDKSTLVDTLSMNILEKQRLKNLKQESSEQK 172


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,767,083
Number of Sequences: 27780
Number of extensions: 285699
Number of successful extensions: 847
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)