BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fmgV11h04f (615 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF145691-1|AAD38666.1| 306|Drosophila melanogaster BcDNA.LD2988... 124 7e-29 AE014134-1103|AAF52392.1| 306|Drosophila melanogaster CG9543-PA... 124 7e-29 AY051440-1|AAK92864.1| 570|Drosophila melanogaster GH11140p pro... 33 0.31 AE014297-2075|AAF55219.1| 570|Drosophila melanogaster CG4525-PA... 33 0.31 L42511-1|AAC41607.1| 224|Drosophila melanogaster shortsighted c... 31 0.93 AF003342-1|AAB61239.1| 225|Drosophila melanogaster bunched prot... 31 0.93 AE014134-2215|AAF53200.2| 219|Drosophila melanogaster CG5461-PB... 31 0.93 AE014297-4823|AAF57207.1| 1844|Drosophila melanogaster CG1976-PA... 28 8.7 >AF145691-1|AAD38666.1| 306|Drosophila melanogaster BcDNA.LD29885 protein. Length = 306 Score = 124 bits (300), Expect = 7e-29 Identities = 73/205 (35%), Positives = 115/205 (56%), Gaps = 4/205 (1%) Frame = +1 Query: 13 MARHQQDVDE---LFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGN 183 M+R Q + D LFD +N +Y+GN+ +IN V P + +++Y SY+A + Sbjct: 1 MSRQQNEEDTNSVLFDARNEYYIGNFMGSIN---FVLPEQGTAGPELLSYMYLSYLAIDS 57 Query: 184 YRIVQQELKTADPM-LQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAAT 360 RIV ++K + LQ L+ + + + ++ + +VA G E I+ + A Sbjct: 58 GRIVASDIKEGNSTPLQALRLVHEAFEQPSRTEELLEKLTDKVA-GEEDETNIWHLATAI 116 Query: 361 IYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLA 540 +Y H+ +E ALKILH + +LE A ++QCLL + R DLA++ + +Q+I DD TLTQLA Sbjct: 117 VYCHDGQFENALKILHGSTNLESMALSVQCLLRLQRVDLAKQLVAKMQEISDDATLTQLA 176 Query: 541 QAWLNLIQGGPGIQDAHYSVMELSE 615 QAW+ L QG +QDA + E E Sbjct: 177 QAWVALAQGTEQMQDAFHIYQEFCE 201 >AE014134-1103|AAF52392.1| 306|Drosophila melanogaster CG9543-PA protein. Length = 306 Score = 124 bits (300), Expect = 7e-29 Identities = 73/205 (35%), Positives = 115/205 (56%), Gaps = 4/205 (1%) Frame = +1 Query: 13 MARHQQDVDE---LFDVKNAFYVGNYQQAINEAQSVSPSTPLVALQRDAFLYRSYIAQGN 183 M+R Q + D LFD +N +Y+GN+ +IN V P + +++Y SY+A + Sbjct: 1 MSRQQNEEDTNSVLFDARNEYYIGNFMGSIN---FVLPEQGTAGPELLSYMYLSYLAIDS 57 Query: 184 YRIVQQELKTADPM-LQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAAT 360 RIV ++K + LQ L+ + + + ++ + +VA G E I+ + A Sbjct: 58 GRIVASDIKEGNSTPLQALRLVHEAFEQPSRTEELLEKLTDKVA-GEEDETNIWHLATAI 116 Query: 361 IYYHEDNYEAALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTLTQLA 540 +Y H+ +E ALKILH + +LE A ++QCLL + R DLA++ + +Q+I DD TLTQLA Sbjct: 117 VYCHDGQFENALKILHGSTNLESMALSVQCLLRLQRVDLAKQLVAKMQEISDDATLTQLA 176 Query: 541 QAWLNLIQGGPGIQDAHYSVMELSE 615 QAW+ L QG +QDA + E E Sbjct: 177 QAWVALAQGTEQMQDAFHIYQEFCE 201 >AY051440-1|AAK92864.1| 570|Drosophila melanogaster GH11140p protein. Length = 570 Score = 33.1 bits (72), Expect = 0.31 Identities = 38/176 (21%), Positives = 77/176 (43%), Gaps = 8/176 (4%) Frame = +1 Query: 25 QQDVDELFDVKNAFYVGNYQQAINEAQSV--SPSTPLVALQRDAFLYRSYIAQGNYRIVQ 198 Q VD+ N F++G+YQQA+ + +++ STP L + + Y+ G Y Q Sbjct: 73 QSQVDQWIAFCN-FHLGDYQQALAQYKAIQQGSSTPDGKLDLNLAVCMFYL--GLYEEAQ 129 Query: 199 QELKTADPMLQPLKS-LVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHE 375 Q + A PLK L+ +L + + + + L ++ L A+++Y Sbjct: 130 QLMANAAD--NPLKQRLLFHLAHKLGNEEEWSQLQEELQDSSSLEQQLSL---ASMHYMR 184 Query: 376 DNYEAALKI-----LHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 528 +Y+ A+ + + N E + + C ++ D++++ L + D T+ Sbjct: 185 AHYQEAIDVYKRVLVDNKEYQAINVYLALCFYKLDYYDMSQEVLDVYLSQHGDSTI 240 >AE014297-2075|AAF55219.1| 570|Drosophila melanogaster CG4525-PA protein. Length = 570 Score = 33.1 bits (72), Expect = 0.31 Identities = 38/176 (21%), Positives = 77/176 (43%), Gaps = 8/176 (4%) Frame = +1 Query: 25 QQDVDELFDVKNAFYVGNYQQAINEAQSV--SPSTPLVALQRDAFLYRSYIAQGNYRIVQ 198 Q VD+ N F++G+YQQA+ + +++ STP L + + Y+ G Y Q Sbjct: 73 QSQVDQWIAFCN-FHLGDYQQALAQYKAIQQGSSTPDGKLDLNLAVCMFYL--GLYEEAQ 129 Query: 199 QELKTADPMLQPLKS-LVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHE 375 Q + A PLK L+ +L + + + + L ++ L A+++Y Sbjct: 130 QLMANAAD--NPLKQRLLFHLAHKLGNEEEWSQLQEELQDSSSLEQQLSL---ASMHYMR 184 Query: 376 DNYEAALKI-----LHNAESLELRAFTLQCLLAMNRPDLARKQLKLLQDIEDDGTL 528 +Y+ A+ + + N E + + C ++ D++++ L + D T+ Sbjct: 185 AHYQEAIDVYKRVLVDNKEYQAINVYLALCFYKLDYYDMSQEVLDVYLSQHGDSTI 240 >L42511-1|AAC41607.1| 224|Drosophila melanogaster shortsighted class 1 protein. Length = 224 Score = 31.5 bits (68), Expect = 0.93 Identities = 27/97 (27%), Positives = 45/97 (46%) Frame = +1 Query: 208 KTADPMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYE 387 K DP+ + + +DY LPDA+ ++ VA ID ++ + +L +I A E E Sbjct: 28 KQQDPVREVVMKYIDYFLPDASGTSAVA-IDNKIEQAMDLVKSHLMI--AVREEVEVLKE 84 Query: 388 AALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKL 498 +++ LEL +L N P +QL+L Sbjct: 85 RISELMDKINKLELE----NSILKSNIPQETLQQLQL 117 >AF003342-1|AAB61239.1| 225|Drosophila melanogaster bunched protein. Length = 225 Score = 31.5 bits (68), Expect = 0.93 Identities = 15/47 (31%), Positives = 27/47 (57%) Frame = +1 Query: 208 KTADPMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLI 348 K DP+ + + +DY LPDA+ ++ VA ID ++ + +L +I Sbjct: 29 KQEDPVCEVVMKYIDYFLPDASGTSAVA-IDNKIEQAMDLVKSHLMI 74 >AE014134-2215|AAF53200.2| 219|Drosophila melanogaster CG5461-PB, isoform B protein. Length = 219 Score = 31.5 bits (68), Expect = 0.93 Identities = 27/97 (27%), Positives = 45/97 (46%) Frame = +1 Query: 208 KTADPMLQPLKSLVDYLLPDANKSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYE 387 K DP+ + + +DY LPDA+ ++ VA ID ++ + +L +I A E E Sbjct: 28 KQQDPVREVVMKYIDYFLPDASGTSAVA-IDNKIEQAMDLVKSHLMI--AVREEVEVLKE 84 Query: 388 AALKILHNAESLELRAFTLQCLLAMNRPDLARKQLKL 498 +++ LEL +L N P +QL+L Sbjct: 85 RISELMDKINKLELE----NSILKSNIPQETLQQLQL 117 >AE014297-4823|AAF57207.1| 1844|Drosophila melanogaster CG1976-PA protein. Length = 1844 Score = 28.3 bits (60), Expect = 8.7 Identities = 19/71 (26%), Positives = 32/71 (45%) Frame = +1 Query: 274 KSAIVADIDARVAKGTELSNEIFLIVAATIYYHEDNYEAALKILHNAESLELRAFTLQCL 453 K ++ D R G +S+EIF + A H+ N AAL+ + + +R +C+ Sbjct: 78 KDPVMLQGDFRKVSG--ISSEIFRQIEAVENDHDPNTAAALEAVERRGEMIVRVLEPRCM 135 Query: 454 LAMNRPDLARK 486 + D A K Sbjct: 136 GSKQAVDAAHK 146 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 25,916,839 Number of Sequences: 53049 Number of extensions: 508365 Number of successful extensions: 1358 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1314 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1354 length of database: 24,988,368 effective HSP length: 82 effective length of database: 20,638,350 effective search space used: 2517878700 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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