Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11h02r
(308 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0175 + 13450869-13451013,13451293-13451372,13451417-134522... 30 0.32
03_06_0601 + 34991912-34992352,34993719-34994516 29 0.56
01_05_0769 - 25042022-25042447,25042856-25043234,25043714-250437... 29 0.56
05_04_0343 - 20437780-20438009,20438576-20438666 29 0.74
02_05_0979 + 33268294-33269595 29 0.98
11_06_0691 - 26315738-26315848,26315939-26316163,26316249-263166... 28 1.3
11_06_0351 - 22577666-22577989,22578282-22578676,22578961-225793... 28 1.7
07_03_1435 - 26532302-26533159,26533559-26534902,26535180-26535188 27 2.3
07_03_0248 + 15798650-15799075,15799143-15799619,15799713-15800948 27 2.3
08_02_0604 - 19215017-19215101,19215870-19216021,19216591-192166... 27 3.0
04_04_0111 - 22842337-22842648,22843008-22843402,22843732-228440... 27 3.0
04_03_0060 - 10511421-10512494 27 3.0
02_01_0311 - 2075881-2076165,2076450-2076519,2076628-2076691,207... 27 3.0
06_01_0351 + 2537022-2538281 27 4.0
03_06_0454 + 34044351-34044499,34045495-34045510,34045640-340458... 27 4.0
03_05_0348 - 23346182-23348022,23348118-23348148 27 4.0
11_06_0425 - 23365108-23366028,23366182-23366340,23366445-233666... 26 5.2
11_04_0169 + 14397380-14397652,14398317-14398874,14399593-143998... 26 5.2
07_01_1132 + 10531922-10532136,10532307-10532433,10532945-105331... 26 5.2
04_04_1122 + 31052497-31052629,31053133-31053191,31053285-310535... 26 5.2
01_05_0275 - 20300994-20301150,20301582-20301670,20302779-203029... 26 5.2
09_03_0007 - 11430123-11430513,11430605-11430794,11431114-114311... 26 6.9
04_04_0475 + 25500470-25500609,25500697-25500794,25502806-255029... 26 6.9
04_03_1035 - 21887562-21890030 26 6.9
08_01_0896 + 8830912-8830984,8831088-8832389,8832502-8832756,883... 25 9.2
06_02_0049 - 10945765-10945893,10946042-10946110,10947278-10947946 25 9.2
02_04_0060 - 19345316-19345453,19345718-19345849,19345937-193460... 25 9.2
01_06_0231 + 27727110-27727206,27727315-27727447,27727491-277275... 25 9.2
01_05_0652 - 23934604-23934636,23934783-23934893,23935000-239351... 25 9.2
>01_03_0175 +
13450869-13451013,13451293-13451372,13451417-13452240,
13452287-13452638
Length = 466
Score = 30.3 bits (65), Expect = 0.32
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -2
Query: 148 LWRSEHFSLLGGKKGRFPHRTELKARIGEDSSRT 47
LW EHF L G + PHR + IG DS+ T
Sbjct: 67 LWSIEHFGLRTGLRRPLPHRHLRVSDIGIDSTST 100
>03_06_0601 + 34991912-34992352,34993719-34994516
Length = 412
Score = 29.5 bits (63), Expect = 0.56
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = -1
Query: 173 AIALGAMTVVAVGTFLFTWWQEREVPPPHGAQGANRRR 60
A A A T A T TWW E P A A+RRR
Sbjct: 282 AAASAAGTAAAADTAAQTWWSEYWARHPEMAAAASRRR 319
>01_05_0769 -
25042022-25042447,25042856-25043234,25043714-25043763,
25044222-25044442,25045085-25045385
Length = 458
Score = 29.5 bits (63), Expect = 0.56
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 185 SAANAIALGAMTVVAVGTFLFTWWQEREVPPPHGAQGANRRR 60
+AA A A+ A+ +AV T + WW R + AQG R
Sbjct: 14 AAAAAAAVAALLWLAVSTLEWAWWTPRRLERALRAQGIRGNR 55
>05_04_0343 - 20437780-20438009,20438576-20438666
Length = 106
Score = 29.1 bits (62), Expect = 0.74
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -1
Query: 215 KNSNSQGSNTSAANAIALGAMTVVAVGTFLFTWWQEREVPPPH 87
K + S+G + LG VV + FLF +WQ+++ H
Sbjct: 43 KKAQSKGHTGRTVLIVLLGIGAVVLLSFFLFKYWQKKKREEQH 85
>02_05_0979 + 33268294-33269595
Length = 433
Score = 28.7 bits (61), Expect = 0.98
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = +3
Query: 90 RWGNLPFLPPSKEKCSDRHNRHRA*CYSISSGCVAALRIRILGHRKMAIYLWQRKTTMIV 269
+W +L PP +E + RH H S C + ++I GH YLW T I+
Sbjct: 94 QWQHLIPRPPVEEIMTARHLPHGTIFPLASKSCHGLVLLKITGHH--THYLWNPSTRHIL 151
>11_06_0691 -
26315738-26315848,26315939-26316163,26316249-26316602,
26316681-26316795,26316882-26316925,26317026-26317122,
26317243-26317406,26317499-26317726,26317903-26318222,
26320028-26320136
Length = 588
Score = 28.3 bits (60), Expect = 1.3
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 85 PCGGGTSLSCHQVKRNVPTATTVIAPSAIALAADVLLPCELEFLVIA 225
P GGG SL C+Q+ + TV+ ++L D ++ +F + A
Sbjct: 209 PTGGGKSL-CYQLPATLHPGVTVVVCPLLSLIEDQIVALNFKFAIPA 254
>11_06_0351 -
22577666-22577989,22578282-22578676,22578961-22579308,
22579449-22579583,22579664-22579731,22579804-22579869,
22579970-22580041,22580143-22580286,22580392-22580463,
22580805-22580872
Length = 563
Score = 27.9 bits (59), Expect = 1.7
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Frame = -1
Query: 290 VPCKVFHHNHCRFSLPQINC--HFAMTK--NSNSQGSNTSAANAIAL--GAMTV-VAVGT 132
+P ++ +H + +NC H + N N+ GSN S +A GA+T+ V +
Sbjct: 130 IPKRLLQVSHYSYIGNHLNCGQHLISCEGNNINTGGSNNSKLKVVASIGGAVTLLVIIVL 189
Query: 131 FLFTWWQEREVPP 93
FL WWQ P
Sbjct: 190 FLL-WWQRMRHRP 201
>07_03_1435 - 26532302-26533159,26533559-26534902,26535180-26535188
Length = 736
Score = 27.5 bits (58), Expect = 2.3
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 127 RNVPTATTVIAPSAIALAADVLLPCELEF 213
R P+ TV +P + A+ +LP E+EF
Sbjct: 591 RTTPSRATVQSPFFLVYGAEAMLPSEVEF 619
>07_03_0248 + 15798650-15799075,15799143-15799619,15799713-15800948
Length = 712
Score = 27.5 bits (58), Expect = 2.3
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +3
Query: 81 SSVRWGNLPFLPPSKEKCSDRHNRHRA*CYSI 176
S +RW FLPPS + SD H + RA +++
Sbjct: 498 SRLRWACDRFLPPSTQLQSDTHWKTRAHTHTV 529
>08_02_0604 -
19215017-19215101,19215870-19216021,19216591-19216614,
19216656-19216884,19217061-19217177,19219249-19219311,
19219887-19220125
Length = 302
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 3/30 (10%)
Frame = -1
Query: 176 NAIALGAM---TVVAVGTFLFTWWQEREVP 96
N I +G++ +V VG +LF W + RE+P
Sbjct: 269 NDITIGSLLGTALVIVGLYLFLWAKAREIP 298
>04_04_0111 -
22842337-22842648,22843008-22843402,22843732-22844073,
22844154-22844282,22844402-22844514,22844596-22844667,
22844783-22844859,22844978-22845052,22845058-22845121,
22845332-22845403,22845496-22845628,22846859-22846961
Length = 628
Score = 27.1 bits (57), Expect = 3.0
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -1
Query: 203 SQG-SNTSA-ANAIALGAMTVVAVGTFLFTWWQEREVPPPH 87
SQG S T A A +A A + AV F WW+ R+ P H
Sbjct: 235 SQGDSKTGAIAGGVAAAAALLFAVPAIGFAWWRRRK-PEEH 274
>04_03_0060 - 10511421-10512494
Length = 357
Score = 27.1 bits (57), Expect = 3.0
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = -3
Query: 171 YSTRRDDGCGGRNISLYLVARKGGSPTARSSRRESAKIVAE 49
YS+RR DG GG ++ R + TA RR+ + VAE
Sbjct: 98 YSSRRSDGFGGLVVA---ERRHRWASTAAERRRQRVRAVAE 135
>02_01_0311 -
2075881-2076165,2076450-2076519,2076628-2076691,
2076798-2076837,2076930-2077006,2077095-2077311,
2077482-2078132
Length = 467
Score = 27.1 bits (57), Expect = 3.0
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = +3
Query: 39 CTMVLLLSSPIRALSSVRWGNLPFLPPSKEKCSDRHN 149
CT L SSP+ + S + G LPFL P KC + N
Sbjct: 105 CTS-LYTSSPMNSGSCRKTGYLPFL-PQPPKCEQQQN 139
>06_01_0351 + 2537022-2538281
Length = 419
Score = 26.6 bits (56), Expect = 4.0
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +3
Query: 54 LLSSPIRALSSVRWGNLPFLPPSKEKCSDRHNRHRA-*CYSISSGCVAALRI-RILGH 221
L++S R L RW NLP + PS R R +SSGC +++ ++GH
Sbjct: 282 LVASNDRLLMVRRWINLPPIYPSDSGIVKRTRRFEVFEAADLSSGCGRWIKVDTLMGH 339
>03_06_0454 + 34044351-34044499,34045495-34045510,34045640-34045862,
34045969-34046092,34046168-34046294,34046821-34046882,
34046972-34048023,34048167-34048556,34048667-34052628,
34052710-34052796,34052885-34053004,34053096-34053152
Length = 2122
Score = 26.6 bits (56), Expect = 4.0
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = -1
Query: 287 PCKVFHHNHCRFSLPQINCHFAMTKNSN---SQGSNTSAANAI 168
PCK + + LPQ++C + + S+ S S+ANA+
Sbjct: 1569 PCKQLESENGSYCLPQVDCQIEPCYSESVVLSEASTMSSANAM 1611
>03_05_0348 - 23346182-23348022,23348118-23348148
Length = 623
Score = 26.6 bits (56), Expect = 4.0
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -1
Query: 254 FSLPQINCHFAMTKNSNSQGSNTSAANAIALGAMTVVA 141
FSL Q + A+ + ++ T+ +AIALG VVA
Sbjct: 161 FSLAQPRAYVALNDPAAAEADITALVDAIALGLFCVVA 198
>11_06_0425 -
23365108-23366028,23366182-23366340,23366445-23366640,
23366995-23367527,23367817-23368272,23368507-23368758,
23368890-23369007,23369836-23369993
Length = 930
Score = 26.2 bits (55), Expect = 5.2
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +2
Query: 209 NSWSSQNGNLFVATKNDNDCDGTLCTVQIENET 307
N WS N NL + DG++ ++ +N+T
Sbjct: 539 NKWSLSNSNLCITNDMKPSKDGSILELKCDNKT 571
>11_04_0169 +
14397380-14397652,14398317-14398874,14399593-14399823,
14399924-14400064,14401051-14401248,14401319-14401591,
14401959-14401976
Length = 563
Score = 26.2 bits (55), Expect = 5.2
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -1
Query: 299 FQSVPCKVFHHNHCRFSLPQINCHFAMTKNSNSQGS 192
F+ PC HH+H SLP + +S+S+ S
Sbjct: 8 FKWAPCPHAHHHHSTSSLPSSSSSSTSAPSSSSRCS 43
>07_01_1132 +
10531922-10532136,10532307-10532433,10532945-10533100,
10533755-10533847,10534010-10534090,10534205-10534276,
10534608-10534676,10534764-10534874,10535039-10535089
Length = 324
Score = 26.2 bits (55), Expect = 5.2
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = -3
Query: 168 STRRDDGCGGRNISLYLVARKGGSPTARSSRR 73
S RR G G + + AR+GG AR+ RR
Sbjct: 13 SARRSRGAGREALRQRMEARRGGLAGARAGRR 44
>04_04_1122 +
31052497-31052629,31053133-31053191,31053285-31053579,
31054099-31054279,31054739-31054956,31055522-31055739,
31055842-31055958,31056106-31056128,31056223-31056438,
31056536-31056677,31056822-31057067,31057659-31057856,
31058331-31058379,31060835-31060911,31061266-31061551,
31061661-31061841,31062149-31062344,31062630-31062738,
31062861-31062961,31063155-31063267,31063347-31063442,
31063531-31063746,31063857-31063995,31064087-31064332,
31064605-31064940
Length = 1396
Score = 26.2 bits (55), Expect = 5.2
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 159 RDDGCGGRNISLYLVARKGGSPTARSSRRESAK 61
R+DG G N LV + GGS + +RRE K
Sbjct: 617 REDGEGKVNSVSLLVIQSGGSVSIEEARREIMK 649
>01_05_0275 -
20300994-20301150,20301582-20301670,20302779-20302937,
20303015-20303255,20303453-20303569,20304804-20304866,
20305009-20305118,20306418-20306495
Length = 337
Score = 26.2 bits (55), Expect = 5.2
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = -3
Query: 174 CYSTRRDDGCGGRNISLYLVARKGGSPTARS 82
C++ R DGCG SL R+GG +RS
Sbjct: 256 CHNKRSADGCGPVYCSLGEEDRRGGYQQSRS 286
>09_03_0007 -
11430123-11430513,11430605-11430794,11431114-11431182,
11431601-11431727,11431843-11432083,11432519-11432596,
11433004-11433109,11433560-11433625,11437021-11437043,
11438106-11438177,11438256-11438394,11439505-11439919
Length = 638
Score = 25.8 bits (54), Expect = 6.9
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -1
Query: 230 HFAMTKNSNSQGSNTSAANAIALGAMTVVAVGTFLFTWWQER 105
+ + T + + S +AI A+TVV GT L W++R
Sbjct: 4 NLSTTSDIQEESSLFGVPSAILQKAVTVVGNGTMLNVTWEDR 45
>04_04_0475 +
25500470-25500609,25500697-25500794,25502806-25502915,
25502998-25503293,25503399-25503474,25503577-25503688,
25503955-25504004,25504090-25504392,25504446-25504547,
25505463-25505635,25505745-25505917,25505997-25506106,
25506180-25506329,25506726-25506881,25507000-25507116,
25507277-25507474,25507809-25507952
Length = 835
Score = 25.8 bits (54), Expect = 6.9
Identities = 9/38 (23%), Positives = 18/38 (47%)
Frame = -1
Query: 227 FAMTKNSNSQGSNTSAANAIALGAMTVVAVGTFLFTWW 114
+ + +N + + A ++ + + A G FLF WW
Sbjct: 55 YLLKRNLQATAKSFMAEGKVSADPVAIDAPGGFLFEWW 92
>04_03_1035 - 21887562-21890030
Length = 822
Score = 25.8 bits (54), Expect = 6.9
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -1
Query: 182 AANAIALG-AMTVVAVGTFLFTWWQEREVPPPHGAQG 75
A + +A+G A+T V G + + W E E PP G
Sbjct: 248 AVSTVAVGDAVTCVLWGNWTVSCWPEGEASPPPALAG 284
>08_01_0896 +
8830912-8830984,8831088-8832389,8832502-8832756,
8832908-8833011
Length = 577
Score = 25.4 bits (53), Expect = 9.2
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = -1
Query: 209 SNSQGSNTSAANAIALGAMTVVAVGTFLFTWWQEREVPPP 90
+N+Q N + GA + V ++F+ + E E P P
Sbjct: 306 ANAQAYNNGLIRRVVSGASGMRDVSAYIFSLFNENEKPGP 345
>06_02_0049 - 10945765-10945893,10946042-10946110,10947278-10947946
Length = 288
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 303 SFSICTVQSVPSQSLSFFVAT 241
SF +CT+ S + FFVAT
Sbjct: 210 SFPLCTIYSATKRHAPFFVAT 230
>02_04_0060 -
19345316-19345453,19345718-19345849,19345937-19346005,
19346453-19346551,19346702-19346786,19346890-19346990,
19347294-19347362,19347635-19347675,19348343-19348458,
19348546-19348702,19349266-19349474,19349811-19349914,
19350234-19350381,19350463-19350761,19350844-19351377
Length = 766
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -3
Query: 168 STRRDDGCGGRNISLYLVARKGGSPTAR 85
S+ DDG G ++S A KGG P R
Sbjct: 82 SSAGDDGDGFSSVSTLATADKGGDPADR 109
>01_06_0231 +
27727110-27727206,27727315-27727447,27727491-27727553,
27729069-27729140,27729640-27729783,27729868-27729990,
27730102-27730157,27730249-27730635,27731176-27731366,
27731498-27731630,27731715-27731869,27732188-27732379,
27732490-27732750
Length = 668
Score = 25.4 bits (53), Expect = 9.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -1
Query: 185 SAANAIALGAMTVVAVGTFLFTWWQEREVPPP 90
++ANA +V + GT F+ ++E +VPPP
Sbjct: 259 ASANAPVPAVASVPSTGTGSFSAFKEIKVPPP 290
>01_05_0652 -
23934604-23934636,23934783-23934893,23935000-23935188,
23935893-23936012,23936109-23936273,23936638-23936790,
23936867-23936976,23937280-23937397,23938197-23938427,
23938984-23939175,23939661-23939945,23940637-23940686,
23940846-23940921,23941048-23941135,23941689-23941771,
23941883-23942248,23942462-23942476,23942909-23943018,
23943134-23943231,23943961-23944019
Length = 883
Score = 25.4 bits (53), Expect = 9.2
Identities = 10/38 (26%), Positives = 17/38 (44%)
Frame = -1
Query: 227 FAMTKNSNSQGSNTSAANAIALGAMTVVAVGTFLFTWW 114
+ M +N + A ++ + + A G FLF WW
Sbjct: 28 YFMKRNLQATAKAFQAEGKVSSDPVAIDAPGGFLFEWW 65
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,736,529
Number of Sequences: 37544
Number of extensions: 196863
Number of successful extensions: 594
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 594
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 375959444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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