Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11h02f
         (361 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   1.7  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   2.9  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   2.9  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   3.8  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   5.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   5.1  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   5.1  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    20   6.7  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      20   6.7  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      20   6.7  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    20   8.8  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 312 CTRKYYFANKIIFPLHYVLLL 250
           C++K +  N  IF L+ VLLL
Sbjct: 108 CSKKSFRMNFAIFNLYMVLLL 128


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 191 QVKRNVPTATTVIAPSA 141
           QVKRNVP  T    P A
Sbjct: 201 QVKRNVPKPTVPKIPPA 217


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = -3

Query: 191 QVKRNVPTATTVIAPSA 141
           QVKRNVP  T    P A
Sbjct: 201 QVKRNVPKPTVPKIPPA 217


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 3.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -1

Query: 277 FSAALCSATIFADSRLE 227
           F  A+C+ T+FA  + E
Sbjct: 9   FILAICACTVFAQQQAE 25


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 303  KYYFANKIIFPLHYVLLLSSPIRALSSVRWG 211
            KY     +  P  Y+LL+   +  +++V WG
Sbjct: 1003 KYGVIYYVTVPSMYLLLVIYSVFNMNNVSWG 1033


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -2

Query: 303  KYYFANKIIFPLHYVLLLSSPIRALSSVRWG 211
            KY     +  P  Y+LL+   +  +++V WG
Sbjct: 1003 KYGVIYYVTVPSMYLLLVIYSVFNMNNVSWG 1033


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 178 FLFTWWQEREVPPPHG 225
           FL T    +EVPPP G
Sbjct: 10  FLPTVLPHQEVPPPFG 25


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +1

Query: 10  FQSVPCKVFHHNHCRFSLPQINCHFAMTKNSNSQGS 117
           FQ VP       H RF  PQ    +   +++ S+G+
Sbjct: 27  FQGVPYAQPPIGHLRFKAPQAPQPWTGIRDALSEGN 62


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +1

Query: 10  FQSVPCKVFHHNHCRFSLPQINCHFAMTKNSNSQGS 117
           FQ VP       H RF  PQ    +   +++ S+G+
Sbjct: 27  FQGVPYAQPPIGHLRFKAPQAPQPWTGIRDALSEGN 62


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +1

Query: 10  FQSVPCKVFHHNHCRFSLPQINCHFAMTKNSNSQGS 117
           FQ VP       H RF  PQ    +   +++ S+G+
Sbjct: 29  FQGVPYAQPPIGHLRFKAPQAPQPWTGIRDALSEGN 64


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 19.8 bits (39), Expect = 8.8
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 191 QVKRNVPTAT 162
           QVKRNVP  T
Sbjct: 201 QVKRNVPKPT 210


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,541
Number of Sequences: 336
Number of extensions: 1697
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7299165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)