Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11h01r
(640 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 8e-05
SB_46661| Best HMM Match : Ferritin (HMM E-Value=0.18) 44 1e-04
SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) 35 0.049
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 32 0.34
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032) 32 0.45
SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54) 32 0.45
SB_6832| Best HMM Match : HLH (HMM E-Value=2.4e-14) 30 1.4
SB_4417| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 29 4.2
SB_12078| Best HMM Match : Ubie_methyltran (HMM E-Value=0.17) 28 5.6
SB_35963| Best HMM Match : Cadherin (HMM E-Value=0) 28 7.4
SB_34907| Best HMM Match : Cadherin (HMM E-Value=0) 28 7.4
SB_5548| Best HMM Match : PT (HMM E-Value=3.1) 28 7.4
SB_35703| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_38385| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_3781| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 56.4 bits (130), Expect = 2e-08
Identities = 37/129 (28%), Positives = 65/129 (50%)
Frame = -2
Query: 636 YFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGSNYTVE 457
+F+ GF K F K S + E L+K +RGG++ + D E
Sbjct: 223 HFDRDDVALPGFHKYFLKASHEEREHAEKLMKFQNERGGRIVLQDIKKPEKD-------E 275
Query: 456 VGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRSL 277
G + ++ ALD +K + + + +H+ K+ D A++T +IE F+++Q + I+ L
Sbjct: 276 WGCGMDSIQVALDLEKHVNQALLDLHKIAEKHGD----AQMTDFIEGNFLTEQVEAIKEL 331
Query: 276 AGHTSDLKR 250
AGH ++LKR
Sbjct: 332 AGHLTNLKR 340
Score = 49.6 bits (113), Expect = 2e-06
Identities = 30/130 (23%), Positives = 65/130 (50%)
Frame = -2
Query: 639 SYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGSNYTV 460
++F + GFA F+K +++ + ++ + KRGG++ H +K +
Sbjct: 2 AHFGRDDIHLPGFAAFFKKAAEEEYTHAHMFMEFLNKRGGRVKL--HHIMKPCRD----- 54
Query: 459 EVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRS 280
G+ + A+ AL +K++ + +H+ N D ++ ++E F+ +Q D+I++
Sbjct: 55 HWGNGLMAMRDALYLEKEINHALLDLHQVADTN----RDPQVQDFLESNFLGEQVDSIKT 110
Query: 279 LAGHTSDLKR 250
LA + S L+R
Sbjct: 111 LANYVSTLQR 120
>SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 50.0 bits (114), Expect = 2e-06
Identities = 33/129 (25%), Positives = 64/129 (49%)
Frame = -2
Query: 636 YFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGSNYTVE 457
+F+ GF K F K S + E L K +RGG++ +K + ++
Sbjct: 155 HFDRDDVALPGFHKYFMKASHEEREHAEKLAKFQLQRGGRIVLQD---IKRPERDDW--- 208
Query: 456 VGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRSL 277
G A+ ALD +K + + + +H+ K+ D +++ ++E ++++Q + I+ L
Sbjct: 209 -GCGQDAIQAALDLEKHVNQALLDLHKVAEKHGD----SQMQDWLESHYLTEQVEAIKEL 263
Query: 276 AGHTSDLKR 250
AGH ++LKR
Sbjct: 264 AGHLTNLKR 272
>SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 47.2 bits (107), Expect = 1e-05
Identities = 31/129 (24%), Positives = 65/129 (50%)
Frame = -2
Query: 636 YFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGSNYTVE 457
+F+ GF K F + S + E L K +RGG++ +K + ++
Sbjct: 170 HFDRDDVALPGFHKYFMEASHEEREHAEKLAKFQLQRGGRIVLQD---IKRPERDDWGC- 225
Query: 456 VGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRSL 277
G ++ + ALD +K + + + +H+ K+ D +++ ++E ++++Q + I+ L
Sbjct: 226 -GQDV--IQAALDLEKHVNQALHDLHKVAEKHGD----SQMQDWLESHYLTEQVEAIKEL 278
Query: 276 AGHTSDLKR 250
AGH ++LKR
Sbjct: 279 AGHMTNLKR 287
>SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 44.4 bits (100), Expect = 8e-05
Identities = 21/70 (30%), Positives = 43/70 (61%)
Frame = -2
Query: 459 EVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRS 280
E G + A+ ALD +K + + + + + KN D A+++ +IE+ F+++Q ++IR
Sbjct: 70 EWGSGLEAMQTALDLEKHVNQALIELEKTAEKNGD----AQMSDFIEDHFLTEQVESIRE 125
Query: 279 LAGHTSDLKR 250
L+G+ + LK+
Sbjct: 126 LSGYIAVLKK 135
>SB_46661| Best HMM Match : Ferritin (HMM E-Value=0.18)
Length = 88
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/76 (28%), Positives = 45/76 (59%)
Frame = -2
Query: 453 GHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRSLA 274
G+ + A+ AL +K++ + +HR+ + +D A++ +IEE F+++Q D+I+ L+
Sbjct: 8 GNGLMAMEDALALEKEILSSLQALHRKAQEEND----AQMQDFIEETFLNEQMDSIKQLS 63
Query: 273 GHTSDLKRFITENNGK 226
+ S L+R E G+
Sbjct: 64 NYVSTLRRLGGEGLGE 79
>SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)
Length = 360
Score = 35.1 bits (77), Expect = 0.049
Identities = 23/68 (33%), Positives = 38/68 (55%)
Frame = -3
Query: 419 TRRSSLPRGFSSSTGKSLKTATSSTMLRSLNTSRRNS*VSKPIRFVASRVTPRTSSGS*P 240
++++SL +S SLK + ++ SL TSR+ K R + + +P+TSS S P
Sbjct: 105 SQKTSLNASRKTSRKTSLKRSLKTSPKTSLKTSRKTD--RKKSRNTSPKRSPKTSSKSSP 162
Query: 239 RTTGKTCL 216
+T+ KT L
Sbjct: 163 KTSPKTSL 170
Score = 34.3 bits (75), Expect = 0.085
Identities = 22/69 (31%), Positives = 38/69 (55%)
Frame = -3
Query: 419 TRRSSLPRGFSSSTGKSLKTATSSTMLRSLNTSRRNS*VSKPIRFVASRVTPRTSSGS*P 240
+R++SL R +S SLKT+ + +S NTS + S K + + +P+TS +
Sbjct: 117 SRKTSLKRSLKTSPKTSLKTSRKTDRKKSRNTSPKRS--PKTSSKSSPKTSPKTSLKTSS 174
Query: 239 RTTGKTCLS 213
+T+ KT L+
Sbjct: 175 KTSPKTSLN 183
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 32.3 bits (70), Expect = 0.34
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 8/58 (13%)
Frame = -2
Query: 378 REVTKNSDLLHDAEITQYIE--------EEFVSQQADTIRSLAGHTSDLKRFITENNG 229
+EVT N+ L D +TQ E EE+V + IR + T +KR+IT++NG
Sbjct: 182 QEVT-NAVTLQDQPVTQSFEPTSEEEKVEEYVDEYGHVIRCITRRTLVIKRYITDDNG 238
>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
Length = 521
Score = 31.9 bits (69), Expect = 0.45
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = -3
Query: 419 TRRSSLPRGFSSSTGKSLKTATSSTMLRSLNTSRRNS*VSKPIRFVASRVTPRTSSGS*P 240
+R++S S S KT+ + ++SL TS + S P R +P+TSS + P
Sbjct: 333 SRKTSRKTSLKRSLKTSPKTSPKTMRMKSLKTSPKTSPEISP------RTSPKTSSKTSP 386
Query: 239 RTTGKTCLS 213
+T+ KT L+
Sbjct: 387 KTSLKTSLN 395
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Frame = -3
Query: 413 RSSLPRGFSSSTGKSLKTATSSTMLRSLNTSRRNS*VSKPIRFVASRVTPR--TSSGS*P 240
++SL +S SLKT+ ++M SL TSRR S + P + + + R TS + P
Sbjct: 154 KTSLKTSLKASLKTSLKTSLKTSMKTSLKTSRRTSLKTCPKTSLETSMKTRLNTSQKTSP 213
Query: 239 RTT 231
T+
Sbjct: 214 ETS 216
Score = 27.9 bits (59), Expect = 7.4
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 1/100 (1%)
Frame = -3
Query: 614 TGKDSRSSSGNYRTIRGRKPLVS*STSLRGVGRWTSRVTPH*KXXXXXXXXXXXXXXSEP 435
T K SR +S RK S TSL+ + + + +P P
Sbjct: 317 TPKTSRKTSQKTSLNASRK--TSRKTSLKRSLKTSPKTSPKTMRMKSLKTSPKTSPEISP 374
Query: 434 WPKPWTRRSSLPR-GFSSSTGKSLKTATSSTMLRSLNTSR 318
P T + P+ +S SL T+ +++ RSLNT++
Sbjct: 375 RTSPKTSSKTSPKTSLKTSLNTSLNTSQKTSLKRSLNTNK 414
>SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54)
Length = 240
Score = 31.9 bits (69), Expect = 0.45
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = -3
Query: 419 TRRSSLPRGFSSSTGKSLKTATSSTMLRSLNTSRRNS*VSKPIRFVASRVTPRTSSGS*P 240
+RR+SL R +S S KT ++ S TS + P +S+ +P+TS S P
Sbjct: 89 SRRTSLKRSLKTSPKTSPKTMRMKSLKTSPKTSPEIGPRTSPK--TSSKTSPKTSPKSSP 146
Query: 239 RTTGKT 222
+T+ KT
Sbjct: 147 KTSPKT 152
>SB_6832| Best HMM Match : HLH (HMM E-Value=2.4e-14)
Length = 189
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1
Query: 331 SDLSIVEEVAVFSDFPVDEENPLGKLLLRVQ 423
SDL +E FSDF ++E LGKL LR++
Sbjct: 137 SDLDDLETDFTFSDFSLEEFPELGKLALRIK 167
>SB_4417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Frame = -2
Query: 459 EVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRS 280
E+G ++ L+KAL +++LA +I + E T NS ++ E T E +S+ +
Sbjct: 458 ELGRQVQELSKALSLKQELANKI--MQNEGTMNSKMIKQYEDTVRELETEISKLEEEKAK 515
Query: 279 LAGHTSDLKRFI-TENNGK 226
LA + K + ++++GK
Sbjct: 516 LATALATAKTAVHSDSDGK 534
>SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20)
Length = 1313
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = -3
Query: 428 KPWTRRSSLPRGFSSSTGKSLKTATSSTMLRSLNTSRRNS 309
KP R+SS SSS+G S +++SST S +SR +S
Sbjct: 1005 KPARRQSSSSSSSSSSSGSSSYSSSSSTGSSSSGSSRSSS 1044
>SB_12078| Best HMM Match : Ubie_methyltran (HMM E-Value=0.17)
Length = 237
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 576 DDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGD 481
+DS ++ +G +K V K GG+ F H K D
Sbjct: 160 EDSLDQLLGEVKRVLKPGGRFYFIEHIADKSD 191
>SB_35963| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 864
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -2
Query: 450 HEIGALAKALDTQKQLAERIFFIHRE---VTKNSDLLHDAEITQYI 322
+EI + +ALDT Q A R+F I + VTKN + D E Y+
Sbjct: 58 NEIYSFFRALDTASQSALRLFDISEDGVVVTKNPLVYTDGEENLYV 103
>SB_34907| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 697
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = -2
Query: 450 HEIGALAKALDTQKQLAERIFFIHRE---VTKNSDLLHDAEITQYI 322
+EI + +ALDT Q A R+F I + VTKN + D E Y+
Sbjct: 54 NEIYSFFRALDTASQSALRLFDISEDGVVVTKNPLVYTDGEENLYV 99
>SB_5548| Best HMM Match : PT (HMM E-Value=3.1)
Length = 157
Score = 27.9 bits (59), Expect = 7.4
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = -3
Query: 386 SSTGKSLKTATSSTMLRSLNTSRRNS*VSKPIRFVASRVTPRTSSGS*PRTTGKT 222
+S S KT+ + ++SL T+ + S K R + +P+TS + P+T+ KT
Sbjct: 5 TSPKTSPKTSQKTMRIKSLKTTPKTS--PKTRRKTGRKTSPKTSPKTSPKTSPKT 57
>SB_35703| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 873
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -1
Query: 592 LQEIIGRFVGENHWSHKARH*EGWEDGLLESH 497
L IIG F+G + S KA+ G++DG+ +++
Sbjct: 185 LDVIIGTFIGPQNASSKAQGFLGYQDGVFQTN 216
>SB_38385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -1
Query: 376 GSH*KQRPPPRC*DHSIHRGGIRESASRYDS*PRGSHLGP 257
G H + P H R G ESA RYD RG+H P
Sbjct: 15 GDHDAESPETPSDGHGSARPGTTESAGRYD---RGTHPAP 51
>SB_3781| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 499
Score = 27.5 bits (58), Expect = 9.7
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 1/98 (1%)
Frame = -2
Query: 597 KLFRKLSDDSWEKTI-GLIKHVTKRGGKMDFSSHTTLKGDKGSNYTVEVGHEIGALAKAL 421
KL + D E T LI + + S+H+ ++GD TV++G ++ L +
Sbjct: 314 KLQALVPSDELELTSRALIYTPLSQSSDSEHSTHSKVQGDIDHIDTVDIGEKV--LREEK 371
Query: 420 DTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFV 307
D+ +++ +R+ I +E+ K LL + E I +E +
Sbjct: 372 DS-REMHQRLQLIEQELQK-LKLLSEDETEDKISQELL 407
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,274,017
Number of Sequences: 59808
Number of extensions: 338114
Number of successful extensions: 830
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 822
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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