Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11h01r
         (640 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g56090.1 68416.m06234 ferritin, putative similar to ferritin ...    53   1e-07
At2g40300.1 68415.m04964 ferritin, putative similar to ferritin ...    53   1e-07
At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin...    49   2e-06
At3g11050.1 68416.m01333 ferritin, putative similar to ferritin ...    47   9e-06
At1g67230.1 68414.m07652 expressed protein                             34   0.092
At3g19920.1 68416.m02522 expressed protein                             29   3.4  
At5g48570.1 68418.m06007 peptidyl-prolyl cis-trans isomerase, pu...    28   4.5  
At2g31960.1 68415.m03905 glycosyl transferase family 48 protein ...    28   4.5  
At2g06200.1 68415.m00682 expressed protein                             28   4.5  
At3g54000.3 68416.m05969 expressed protein                             28   6.0  
At3g54000.2 68416.m05968 expressed protein                             28   6.0  
At1g58210.1 68414.m06610 kinase interacting family protein simil...    28   6.0  
At2g26660.1 68415.m03198 SPX (SYG1/Pho81/XPR1) domain-containing...    27   7.9  
At2g24070.1 68415.m02875 expressed protein contains Pfam domain,...    27   7.9  

>At3g56090.1 68416.m06234 ferritin, putative similar to ferritin
           subunit cowpea2 precursor [Vigna unguiculata]
           GI:2970654; contains Pfam profile PF00210: Ferritin-like
           domain
          Length = 259

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 32/130 (24%), Positives = 66/130 (50%)
 Frame = -2

Query: 639 SYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGSNYTV 460
           +YF+      +G AK F++ S +  E    L+++  KRGG++        + +       
Sbjct: 118 AYFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNKRGGRVKLQPMVLPQSEFDH---P 174

Query: 459 EVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRS 280
           E G  + A+  AL  +K + E++  +H   +KN D+    ++  +IE  F+++Q + I+ 
Sbjct: 175 EKGDALYAMELALSLEKLVNEKLLNLHSVASKNDDV----QLADFIESVFLNEQVEAIKK 230

Query: 279 LAGHTSDLKR 250
           ++ + S L+R
Sbjct: 231 ISEYVSQLRR 240


>At2g40300.1 68415.m04964 ferritin, putative similar to ferritin
           subunit cowpea2 precursor [Vigna unguiculata]
           GI:2970654; contains Pfam profile PF00210: Ferritin-like
           domain
          Length = 259

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 32/130 (24%), Positives = 67/130 (51%)
 Frame = -2

Query: 639 SYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGSNYTV 460
           +YF+      +G AK F++ S +  E    L+++  KRGG++   S   +         V
Sbjct: 120 AYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNKRGGRVKLQS---IVMPLSEFEHV 176

Query: 459 EVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRS 280
           + G  +  +  AL  +K + E++  +H   +KN+D+     +  +IE EF+++Q + I+ 
Sbjct: 177 DKGDALYGMELALSLEKLVNEKLLNLHSVASKNNDV----HLADFIESEFLTEQVEAIKL 232

Query: 279 LAGHTSDLKR 250
           ++ + + L+R
Sbjct: 233 ISEYVAQLRR 242


>At5g01600.1 68418.m00075 ferritin 1 (FER1) identical to ferritin
           [Arabidopsis thaliana] GI:1246401, GI:8163920
          Length = 255

 Score = 49.2 bits (112), Expect = 2e-06
 Identities = 30/137 (21%), Positives = 69/137 (50%)
 Frame = -2

Query: 639 SYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGSNYTV 460
           +YF+      +G AK F++ S++        +++  +RGG++    H  +       +  
Sbjct: 117 AYFDRDNVAMKGLAKFFKESSEEERGHAEKFMEYQNQRGGRVKL--HPIVSPISEFEH-A 173

Query: 459 EVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRS 280
           E G  + A+  AL  +K   E++  +H+  ++N    +D ++  ++E EF+ +Q + I+ 
Sbjct: 174 EKGDALYAMELALSLEKLTNEKLLNVHKVASEN----NDPQLADFVESEFLGEQIEAIKK 229

Query: 279 LAGHTSDLKRFITENNG 229
           ++ + + L R I + +G
Sbjct: 230 ISDYITQL-RMIGKGHG 245


>At3g11050.1 68416.m01333 ferritin, putative similar to ferritin
           subunit cowpea2 precursor GI:2970654 (Vigna
           unguiculata); contains Pfam profile PF00210:
           Ferritin-like domain
          Length = 253

 Score = 47.2 bits (107), Expect = 9e-06
 Identities = 30/130 (23%), Positives = 61/130 (46%)
 Frame = -2

Query: 639 SYFNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGSNYTV 460
           +YF+      +GFAK F   S +        +++  KRGG++   S      +       
Sbjct: 112 AYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRGGRVKLQSILMPVSEFDHE--- 168

Query: 459 EVGHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRS 280
           E G  + A+  AL  +K   E++  +     KN+D+    ++  ++E EF+ +Q + I+ 
Sbjct: 169 EKGDALHAMELALSLEKLTNEKLLKLQSVGVKNNDV----QLVDFVESEFLGEQVEAIKK 224

Query: 279 LAGHTSDLKR 250
           ++ + + L+R
Sbjct: 225 ISEYVAQLRR 234


>At1g67230.1 68414.m07652 expressed protein
          Length = 1132

 Score = 33.9 bits (74), Expect = 0.092
 Identities = 37/146 (25%), Positives = 61/146 (41%), Gaps = 4/146 (2%)
 Frame = -2

Query: 621 QTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRGGKMDFSSHTT---LKGDK-GSNYTVEV 454
           +  RE F K + +L D+   K    +K++T +  K++   H     LK +K  +N  +E 
Sbjct: 515 KAQRESFEKEWEEL-DERKAKIGNELKNITDQKEKLERHIHLEEERLKKEKQAANENMER 573

Query: 453 GHEIGALAKALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRSLA 274
             E   +AKA   +    ER     +  ++ S LLHD E+    + +  S     +    
Sbjct: 574 ELETLEVAKASFAETMEYERSMLSKKAESERSQLLHDIEMR---KRKLESDMQTILEEKE 630

Query: 273 GHTSDLKRFITENNGKDLSLAVYLFD 196
                 K+   E   K+LS   YL D
Sbjct: 631 RELQAKKKLFEEEREKELSNINYLRD 656


>At3g19920.1 68416.m02522 expressed protein 
          Length = 416

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = +1

Query: 226 FPVVLGYEPLEVRGVTREATNRIGLLTHEFLL-DVLSDLSI 345
           FPV+ GYE +EV     +A + +  L  E LL + L D S+
Sbjct: 352 FPVLTGYERVEVERAIDKAISTLPALDQEILLTNWLQDFSV 392


>At5g48570.1 68418.m06007 peptidyl-prolyl cis-trans isomerase,
           putative / FK506-binding protein, putative similar to
           rof1 [Arabidopsis thaliana] GI:1373396
          Length = 578

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = -2

Query: 573 DSWEKTIGLIKHVTKRGGKMDFSSHTTLKGDKGSNYTVEVGHEIGALAKALDTQKQ 406
           + WEK   L +   K   +++    T +    G  +TV+ GH   AL+KA+ T K+
Sbjct: 173 EKWEKPKDLDEVYVKYEARLE--DGTIVGKSDGVEFTVKEGHFCPALSKAVKTMKR 226


>At2g31960.1 68415.m03905 glycosyl transferase family 48 protein
            contains Pfam profile: PF02364 1,3-beta-glucan synthase;
            contains non-consensus splice aite AC at exon 33
          Length = 1959

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -2

Query: 633  FNNYQTNREGFAKLFRKLSDDSWEKTIGLIKHVTKRG 523
            +N +  NR G      K  +  WEK IG ++H  KRG
Sbjct: 1729 WNKWIYNRGGIGVPPEKSWESWWEKEIGHLRHSGKRG 1765


>At2g06200.1 68415.m00682 expressed protein
          Length = 244

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +2

Query: 521 PPLLVTCFMRPMVFSHESSDNFLKSFANPSL 613
           PP L+    RP +FS  SS +   SF +P+L
Sbjct: 32  PPHLLFLIKRPFLFSSSSSSSSSSSFFSPTL 62


>At3g54000.3 68416.m05969 expressed protein
          Length = 301

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = -3

Query: 434 WPKPWTRRSSLPRGF-SSSTGKSLKTATSSTMLRSLNTSRRNS*VSKPIRFVASRV 270
           W   + RR  +   F    TGK   T T   + RS+N + R     KP +F+ S +
Sbjct: 237 WSNQFPRRDVMRAVFIGDHTGKRGSTGTGVFLPRSVNHTSRTETREKPSKFLKSSI 292


>At3g54000.2 68416.m05968 expressed protein
          Length = 301

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
 Frame = -3

Query: 434 WPKPWTRRSSLPRGF-SSSTGKSLKTATSSTMLRSLNTSRRNS*VSKPIRFVASRV 270
           W   + RR  +   F    TGK   T T   + RS+N + R     KP +F+ S +
Sbjct: 237 WSNQFPRRDVMRAVFIGDHTGKRGSTGTGVFLPRSVNHTSRTETREKPSKFLKSSI 292


>At1g58210.1 68414.m06610 kinase interacting family protein similar
           to kinase interacting protein 1 (GI:13936326) {Petunia
           integrifolia}
          Length = 1246

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 17/70 (24%), Positives = 28/70 (40%)
 Frame = -2

Query: 429 KALDTQKQLAERIFFIHREVTKNSDLLHDAEITQYIEEEFVSQQADTIRSLAGHTSDLKR 250
           K  D  K L  +    +R V   S  + D ++ + +E   + Q+   +        DLK 
Sbjct: 724 KVEDQNKNLQNQFKVANRTVDDLSGKIQDVKMDEDVEGAGIFQELPVVSGSEDSRDDLKS 783

Query: 249 FITENNGKDL 220
             TE   KD+
Sbjct: 784 VSTEKTKKDV 793


>At2g26660.1 68415.m03198 SPX (SYG1/Pho81/XPR1) domain-containing
           protein low similarity to NUC-2 [Neurospora crassa]
           GI:1399532, xenotropic and polytropic murine leukemia
           virus receptor [Mus musculus castaneus] GI:6093320;
           contains Pfam profile PF03105: SPX domain
          Length = 287

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -2

Query: 582 LSDDSWEKTIGLIKHVTK 529
           L DDSW+K +G+++ V K
Sbjct: 270 LEDDSWKKKVGVLEQVAK 287


>At2g24070.1 68415.m02875 expressed protein contains Pfam domain,
           PF04484: Family of unknown function (DUF566)
          Length = 609

 Score = 27.5 bits (58), Expect = 7.9
 Identities = 16/90 (17%), Positives = 39/90 (43%)
 Frame = -2

Query: 543 KHVTKRGGKMDFSSHTTLKGDKGSNYTVEVGHEIGALAKALDTQKQLAERIFFIHREVTK 364
           +H++   G +      TL+         ++G    A++ ALD  + +   I+ +H ++ +
Sbjct: 480 EHISSLAGAIGDLEANTLRLPLAGGTKADLGSLKLAMSSALDVMQSMGSSIWSLHSQMEE 539

Query: 363 NSDLLHDAEITQYIEEEFVSQQADTIRSLA 274
            + L+ D  +    E   + +  + + S A
Sbjct: 540 MNKLVSDLAVIAKTENFLLDKCENLLASTA 569


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,956,487
Number of Sequences: 28952
Number of extensions: 243533
Number of successful extensions: 684
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1314848736
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)