Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11g23r
         (721 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1192 + 24698355-24698433,24699312-24699391,24700027-247004...    31   0.92 
07_03_1193 - 24702135-24702421,24702835-24703160,24703240-247039...    30   2.1  
03_04_0076 - 17068516-17068838,17068897-17069198,17069282-170694...    29   2.8  
04_04_0658 + 27006245-27006305,27006447-27006523,27006798-270072...    29   3.7  
03_04_0075 + 17066321-17066381,17066476-17067534,17067641-17067927     29   3.7  

>07_03_1192 +
           24698355-24698433,24699312-24699391,24700027-24700483,
           24700641-24700794,24700878-24701155,24701225-24701517
          Length = 446

 Score = 31.1 bits (67), Expect = 0.92
 Identities = 8/17 (47%), Positives = 15/17 (88%)
 Frame = +1

Query: 358 IRIHFNIRINYNEYWLI 408
           IR+H+++++NY EYW +
Sbjct: 288 IRVHWHVKVNYKEYWRV 304


>07_03_1193 -
           24702135-24702421,24702835-24703160,24703240-24703910,
           24704342-24704421,24704515-24704572
          Length = 473

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 7/15 (46%), Positives = 14/15 (93%)
 Frame = +1

Query: 358 IRIHFNIRINYNEYW 402
           +R+H+++++NY EYW
Sbjct: 317 VRVHWHVKLNYREYW 331


>03_04_0076 -
           17068516-17068838,17068897-17069198,17069282-17069435,
           17069506-17069965,17070413-17070492,17070813-17070869,
           17071757-17071838
          Length = 485

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 7/17 (41%), Positives = 15/17 (88%)
 Frame = +1

Query: 358 IRIHFNIRINYNEYWLI 408
           IR+H+++++NY +YW +
Sbjct: 309 IRVHWHVKLNYRDYWRV 325


>04_04_0658 +
           27006245-27006305,27006447-27006523,27006798-27007225,
           27007614-27007882,27007966-27008249
          Length = 372

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 7/17 (41%), Positives = 15/17 (88%)
 Frame = +1

Query: 358 IRIHFNIRINYNEYWLI 408
           +R+H++++I+Y EYW +
Sbjct: 217 VRVHWHVKISYREYWRV 233


>03_04_0075 + 17066321-17066381,17066476-17067534,17067641-17067927
          Length = 468

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 7/15 (46%), Positives = 14/15 (93%)
 Frame = +1

Query: 358 IRIHFNIRINYNEYW 402
           IR+H+++++NY +YW
Sbjct: 312 IRVHWHVKLNYKDYW 326


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,128,579
Number of Sequences: 37544
Number of extensions: 233643
Number of successful extensions: 307
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 307
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)