Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11g23f
(614 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0080 + 6598427-6598663,6599246-6599391,6599567-6599669,660... 158 3e-39
08_02_0585 + 19014674-19014871,19014987-19015132,19016742-190168... 154 5e-38
09_03_0038 + 11790075-11790302,11790397-11790542,11790915-117910... 153 1e-37
09_03_0039 + 11799277-11799486,11799565-11799710,11800758-118008... 149 2e-36
03_06_0470 + 34164873-34165856,34166335-34166568,34166680-341670... 38 0.008
01_01_0626 - 4713943-4714515,4714645-4714853,4717310-4717628 29 2.2
12_01_0561 + 4550119-4550265,4550716-4550791,4551601-4551668,455... 29 3.9
09_04_0198 + 15528576-15528645,15528746-15528893,15529182-155293... 29 3.9
07_03_0244 - 15715047-15715163,15716672-15716824,15718629-157187... 29 3.9
06_03_0243 + 18629793-18630047,18630362-18630442,18631911-186323... 28 5.1
06_02_0364 + 15178583-15178881,15179652-15179723,15179853-151799... 28 5.1
04_04_1186 + 31567425-31567438,31568168-31568254,31568335-315684... 27 8.9
01_01_0066 - 513578-513730,513809-513920,514000-514163,514369-51... 27 8.9
>02_02_0080 +
6598427-6598663,6599246-6599391,6599567-6599669,
6600407-6600593,6600699-6600792,6601290-6601443,
6601751-6601855,6601937-6602053,6602248-6602361,
6602891-6603073,6603207-6603486,6603565-6603686,
6603763-6603860,6603941-6604118,6604439-6604553,
6604656-6604723,6604825-6604902,6604986-6605060,
6605156-6605338
Length = 878
Score = 158 bits (384), Expect = 3e-39
Identities = 81/169 (47%), Positives = 104/169 (61%), Gaps = 1/169 (0%)
Frame = +1
Query: 109 RLPNNVIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNSLDLDLKNVKLQYND- 285
RLP P+ Y L L+P+L+ F G V V + PT +VLN+ +L++ +Q+
Sbjct: 16 RLPGFAAPRRYDLRLVPDLDGCAFTGSVDVSVDVTAPTRFLVLNAAELEVSPGGVQFKPH 75
Query: 286 GSNSAIIPSSVELSTTDETASIYFSESLLEGEATLYSEFTGEINDKMKGLYRSKYIAPNG 465
G+ + P+ V DE I F+E L GE TL F G +NDKM G YRS Y NG
Sbjct: 76 GAEQELHPAEVTNVPEDEILIIRFNEVLPVGEGTLVIAFKGTLNDKMHGFYRSVYEL-NG 134
Query: 466 EERYAAVTQFEATDARRCFPCWDEPAIKATFDITLQVPADRVALSNMPV 612
E++ AVTQFE DARRCFPCWDEP+ KA F ITL+VP++ VALSNMPV
Sbjct: 135 EKKNMAVTQFEPADARRCFPCWDEPSFKAIFKITLEVPSETVALSNMPV 183
>08_02_0585 +
19014674-19014871,19014987-19015132,19016742-19016844,
19017064-19017250,19017368-19017461,19017570-19017723,
19018076-19018192,19018276-19018296,19019096-19019209,
19019970-19020152,19021032-19021239,19021326-19021447,
19021559-19021656,19021875-19022052,19022130-19022244,
19022331-19022398,19022526-19022603,19023737-19023814,
19023897-19024082
Length = 815
Score = 154 bits (374), Expect = 5e-38
Identities = 85/168 (50%), Positives = 103/168 (61%)
Frame = +1
Query: 109 RLPNNVIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNSLDLDLKNVKLQYNDG 288
RLP P Y L L P+L F G AV V++ PT +VLN+ +L + DG
Sbjct: 13 RLPRCASPLSYDLRLRPDLAACAFSGSAAVAVAVSAPTRFLVLNAAELAV--------DG 64
Query: 289 SNSAIIPSSVELSTTDETASIYFSESLLEGEATLYSEFTGEINDKMKGLYRSKYIAPNGE 468
S S ++PS V DE I F + L GE L +FTG +ND+M+G YRSKY GE
Sbjct: 65 S-SDLVPSEVVQFEEDEIVVIGFGQDLPIGEGVLKMDFTGTLNDQMRGFYRSKY-EYKGE 122
Query: 469 ERYAAVTQFEATDARRCFPCWDEPAIKATFDITLQVPADRVALSNMPV 612
R AVTQFEA DARRCFPCWDEPA KA F +TL+VP++ VALSNMPV
Sbjct: 123 SRNMAVTQFEAADARRCFPCWDEPAFKAKFKLTLEVPSELVALSNMPV 170
>09_03_0038 +
11790075-11790302,11790397-11790542,11790915-11791017,
11791148-11791334,11791466-11791559,11791702-11791855,
11792189-11792305,11792695-11792808,11793629-11793811,
11794209-11794494,11794592-11794713,11794746-11794802,
11794803-11794900,11795036-11795213,11795355-11795455,
11795530-11795629,11795751-11795828,11796785-11796862,
11796956-11797138
Length = 868
Score = 153 bits (371), Expect = 1e-37
Identities = 78/168 (46%), Positives = 101/168 (60%)
Frame = +1
Query: 109 RLPNNVIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNSLDLDLKNVKLQYNDG 288
RLP P+ Y L L P+L+ F G +V V + PT +VLN+ DL + +++
Sbjct: 19 RLPRFAAPRRYELRLRPDLDACVFTGDASVVVDVSAPTRFLVLNAADLAVDRASIRFQ-- 76
Query: 289 SNSAIIPSSVELSTTDETASIYFSESLLEGEATLYSEFTGEINDKMKGLYRSKYIAPNGE 468
+ P+ V L DE + F L GE L +F G +ND+M+G YRSKY GE
Sbjct: 77 ---GLAPTEVSLFEDDEILVLEFDGELPLGEGVLAMDFNGTLNDQMRGFYRSKY-EYKGE 132
Query: 469 ERYAAVTQFEATDARRCFPCWDEPAIKATFDITLQVPADRVALSNMPV 612
+ AVTQFEA DARRCFPCWDEPA KA F +TL+VP++ VALSNMPV
Sbjct: 133 TKNMAVTQFEAVDARRCFPCWDEPAFKAKFKLTLEVPSELVALSNMPV 180
>09_03_0039 +
11799277-11799486,11799565-11799710,11800758-11800860,
11800996-11801182,11801299-11801392,11801530-11801683,
11801963-11802067,11802151-11802267,11802688-11802801,
11803171-11803260,11803875-11804057,11809196-11809550,
11809574-11809643,11809993-11810167,11810251-11810351,
11810390-11810516,11810639-11810716,11811926-11812270
Length = 917
Score = 149 bits (361), Expect = 2e-36
Identities = 74/168 (44%), Positives = 101/168 (60%)
Frame = +1
Query: 109 RLPNNVIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNSLDLDLKNVKLQYNDG 288
RLP P+ Y L L P+L F G+ +V V + PT +VLN+ DL + +++
Sbjct: 13 RLPRFAAPRRYELRLRPDLAACVFSGEASVAVDVSAPTRFLVLNAADLAVDRASIRFQ-- 70
Query: 289 SNSAIIPSSVELSTTDETASIYFSESLLEGEATLYSEFTGEINDKMKGLYRSKYIAPNGE 468
+ P+ V + DE + F+ L GE L F G +ND+M+G YRSKY GE
Sbjct: 71 ---GLAPAEVSVFEEDEILVLEFAGELPLGEGVLAMRFNGTLNDQMRGFYRSKY-EYKGE 126
Query: 469 ERYAAVTQFEATDARRCFPCWDEPAIKATFDITLQVPADRVALSNMPV 612
+ AVTQFE+ DARRCFPCWDEP+ KA F +TL+VP++ VALSNMP+
Sbjct: 127 TKNMAVTQFESVDARRCFPCWDEPSFKAKFKLTLEVPSELVALSNMPI 174
>03_06_0470 +
34164873-34165856,34166335-34166568,34166680-34167006,
34168426-34168716
Length = 611
Score = 37.5 bits (83), Expect = 0.008
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +1
Query: 487 TQFEATDARRCFPCWDEPAIKATFDITLQVPADRVALS 600
+Q ++ AR FPC D PA + TFD+ L VP A++
Sbjct: 128 SQCQSIHARSVFPCHDTPAARITFDLLLNVPTQLSAVA 165
>01_01_0626 - 4713943-4714515,4714645-4714853,4717310-4717628
Length = 366
Score = 29.5 bits (63), Expect = 2.2
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +1
Query: 184 GKTAVKVSIVNPTNVI---VLNSLDLDLKNVKLQYNDGSNSAIIPSSVELSTTDET 342
G++ I+ PT V V+N D + KL DGS+++I PS++ L T T
Sbjct: 282 GESGTNHEILKPTPVNGKEVINKADEVVGMSKLTIGDGSSNSIEPSALSLQLTGPT 337
>12_01_0561 +
4550119-4550265,4550716-4550791,4551601-4551668,
4551951-4552039,4552136-4552313,4553096-4553229,
4553307-4553520,4553601-4553785,4553930-4554025,
4554105-4554231
Length = 437
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 442 SKYIAPNGEERYAAVTQFEATDARRCFPCWDEPAIKATFDITLQVP 579
S+Y+AP G ERY V + R C D A+ + TL +P
Sbjct: 71 SRYMAPKGSERYMTVRSNGGLNQMRTGIC-DMVAVARLVNATLVIP 115
>09_04_0198 +
15528576-15528645,15528746-15528893,15529182-15529377,
15529512-15529604,15530403-15530462,15530563-15530637,
15531072-15531152,15531262-15531603,15531967-15531999
Length = 365
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 250 LDLKNVKLQYNDGSNSAIIPSSVELSTTDETASIYFSESLL 372
LD+K L Y+DG A IP+ +E+ SI+FSE +
Sbjct: 192 LDIKPY-LPYSDGVKGAAIPNWLEVDGALAVESIHFSEHFI 231
>07_03_0244 -
15715047-15715163,15716672-15716824,15718629-15718748,
15718830-15719045,15719902-15719968,15720051-15720125,
15720607-15720698,15721053-15721154,15721642-15721711,
15721788-15721846,15721947-15722031,15722443-15722520,
15722627-15722725,15722819-15722910,15725572-15725661,
15725937-15725995,15727966-15728281,15728627-15728702,
15729998-15730308,15730577-15730634,15731082-15731092,
15731247-15731397,15733372-15733778
Length = 967
Score = 28.7 bits (61), Expect = 3.9
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 201 FHRSFSLESKFFQIWNQFQCIMLRNHIIR 115
F RS ++ + + WN C++L H+IR
Sbjct: 699 FTRSVQIDPENGEAWNNIACLLLSRHMIR 727
>06_03_0243 +
18629793-18630047,18630362-18630442,18631911-18632305,
18632471-18632926,18633156-18633247,18633528-18633683,
18635657-18636057
Length = 611
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -3
Query: 135 LRNHIIRKSLKRL-VLWHCHFFFRDRQCRTRCINVP 31
L + ++R RL LW C F +R R CR R ++ P
Sbjct: 156 LHDVVLRPLRCRLHALWRCFFHWRSRCCRHRGLSPP 191
>06_02_0364 +
15178583-15178881,15179652-15179723,15179853-15179917,
15180890-15180934,15182493-15183170,15183376-15183410,
15183647-15183736,15183896-15183985,15184164-15184262,
15184938-15185013,15185473-15185588
Length = 554
Score = 28.3 bits (60), Expect = 5.1
Identities = 27/108 (25%), Positives = 40/108 (37%), Gaps = 2/108 (1%)
Frame = +1
Query: 277 YNDGSNSAIIPSSVELSTTD--ETASIYFSESLLEGEATLYSEFTGEINDKMKGLYRSKY 450
Y+ G N + + + E I +S LE A LY + G + +
Sbjct: 222 YDKGDNGVDVEELIHRMNEEYWEPGEIKSQKSRLEVVAKLYEQMFGPNGPQTEEELGD-- 279
Query: 451 IAPNGEERYAAVTQFEATDARRCFPCWDEPAIKATFDITLQVPADRVA 594
P+ E RY + D+ PC+D FDI V DRV+
Sbjct: 280 -IPDAETRYNEWKALQKDDSASSLPCYDIIDNGQEFDI-FNVATDRVS 325
>04_04_1186 +
31567425-31567438,31568168-31568254,31568335-31568410,
31568516-31568590,31568678-31568731,31569722-31569781,
31569910-31570026,31570389-31570483,31570603-31570805,
31571224-31571321,31571585-31571688,31571872-31571920,
31571988-31572110,31572566-31572648,31573533-31573674,
31574399-31574428,31574452-31574508,31574545-31574615,
31574715-31575318
Length = 713
Score = 27.5 bits (58), Expect = 8.9
Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +1
Query: 277 YNDGSNSAIIPSSVELSTTDETASIYFSESLLE-GEATLYSEFTGEINDKMKGLYRSKYI 453
Y D ++ ++ SS+ L ++ S++ + + GE GE+N + S+
Sbjct: 492 YFDDESAEVVISSLRLGDEHDSNSLFTNSNWFAFGED---KALNGEVNPEASPSPNSEIS 548
Query: 454 APNGEERYAAVTQFEATDARR 516
+PN ++ V E TD R+
Sbjct: 549 SPNVDDENDEVILTEVTDGRK 569
>01_01_0066 -
513578-513730,513809-513920,514000-514163,514369-514521,
514598-514736,514823-514923,514995-515666,515953-516038,
516112-516777,516874-517128,517231-517358,518645-518799,
518880-519133,519186-519260,519324-519399,519511-519644,
519871-520153,520692-520850,520940-521038,521142-521310,
521423-521653,522002-522114,524179-524310,524389-524469,
525641-525763
Length = 1570
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -2
Query: 385 SLRLLVKILRNKYLLFHQLYSILLTMELSLN*SHRYTEVSHFSNPSL 245
SLR + K+ Y+L+ L+ IL MELS ++R ++ + P L
Sbjct: 33 SLRFVKKVKACNYMLYLSLFDILGRMELSRLEAYRELQLLFQNYPDL 79
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.132 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,966,821
Number of Sequences: 37544
Number of extensions: 289619
Number of successful extensions: 813
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 805
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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