Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11g23f
(614 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32209| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 109 1e-24
SB_5727| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 109 2e-24
SB_9130| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 93 2e-19
SB_35142| Best HMM Match : Peptidase_M1 (HMM E-Value=2e-13) 77 1e-14
SB_11560| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 77 1e-14
SB_37656| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 4e-13
SB_51392| Best HMM Match : Peptidase_M1 (HMM E-Value=0) 69 2e-12
SB_13904| Best HMM Match : Peptidase_M1 (HMM E-Value=3.7e-08) 64 9e-11
SB_32141| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 3e-10
SB_45004| Best HMM Match : Peptidase_M1 (HMM E-Value=0.0054) 58 7e-09
SB_16863| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_54833| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_7564| Best HMM Match : Peptidase_M1 (HMM E-Value=6.8e-08) 42 5e-04
SB_48126| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39) 39 0.003
SB_45006| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.003
SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22) 29 2.3
SB_38519| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_33033| Best HMM Match : G-patch (HMM E-Value=0.71) 28 5.2
SB_20213| Best HMM Match : MFS_1 (HMM E-Value=0.023) 28 6.9
SB_57109| Best HMM Match : DUF1280 (HMM E-Value=7.4) 27 9.1
SB_37154| Best HMM Match : WD40 (HMM E-Value=7.00649e-45) 27 9.1
SB_44586| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_13331| Best HMM Match : Peptidase_C5 (HMM E-Value=0.68) 27 9.1
>SB_32209| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 1240
Score = 109 bits (263), Expect = 1e-24
Identities = 62/170 (36%), Positives = 93/170 (54%), Gaps = 2/170 (1%)
Frame = +1
Query: 109 RLPNNVIPKHYALELIPNLEK-FTFKGKTAVKVSIVNPTNVIVLNSLDLDLKNVKLQYND 285
RLP++V P+ Y + L P L+ FTF G +V+V T+ I +++ + L ++ N
Sbjct: 132 RLPSSVTPEEYTVILRPKLDPDFTFSGNVSVRVKCNEDTDYIFIHAKQMRLTKFEV-LNQ 190
Query: 286 GSNSAIIPSSVELSTTDETASIYFSESLLEGEA-TLYSEFTGEINDKMKGLYRSKYIAPN 462
G I + E SI L +GE+ L +F + +K+ G Y+S Y +
Sbjct: 191 GKEPLKIMETANCEKL-EMFSIKVKGGLKKGESYVLQIDFNAVLAEKLTGFYKSSYKDKD 249
Query: 463 GEERYAAVTQFEATDARRCFPCWDEPAIKATFDITLQVPADRVALSNMPV 612
G RY A T FE TDAR FPC+DEPA+KA F++ + A+ V+LSNMP+
Sbjct: 250 GNTRYLATTHFEPTDARAAFPCFDEPALKAVFNMVIYRKAEHVSLSNMPI 299
>SB_5727| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 904
Score = 109 bits (261), Expect = 2e-24
Identities = 58/169 (34%), Positives = 97/169 (57%), Gaps = 1/169 (0%)
Frame = +1
Query: 109 RLPNNVIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNSLDLDLKNVKLQYNDG 288
RLP NV+P HY + L L++ F G + + +++ T++I+++S +++ + + G
Sbjct: 240 RLPKNVVPVHYNVYLNIILKELRFTGTSEIHLNVTQSTDLILVHSARMNVTSGSVMNKAG 299
Query: 289 SNSAIIPSSVELSTTDETASIYFSESLLE-GEATLYSEFTGEINDKMKGLYRSKYIAPNG 465
AI ++ E+ LE G + F ++D++ GLYRS+Y +G
Sbjct: 300 DQQAI---KKRFWFEKNQFTVLQMETALEPGPYVVMLGFEAFLSDQLNGLYRSQYTHKDG 356
Query: 466 EERYAAVTQFEATDARRCFPCWDEPAIKATFDITLQVPADRVALSNMPV 612
+ A TQF+ TDAR+ FPC DEPA+KATF+IT++ D +A+SNMP+
Sbjct: 357 KNVTIATTQFQPTDARKAFPCLDEPALKATFNITIEHRPDFIAISNMPI 405
>SB_9130| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 890
Score = 92.7 bits (220), Expect = 2e-19
Identities = 52/162 (32%), Positives = 86/162 (53%), Gaps = 3/162 (1%)
Frame = +1
Query: 136 HYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNSLDLDLKNVKLQYNDGSNSAIIPSS 315
HY L L L++ F GK + +++ T +I++++ L++ ++ ++ GS ++
Sbjct: 113 HYNLFLNVTLDRDHFHGKVDIYINVFKATKIIIVHNRRLNVSDIDIR-KTGSQGSL---G 168
Query: 316 VELSTTDETASIYFSESLLEGEATLYS---EFTGEINDKMKGLYRSKYIAPNGEERYAAV 486
+ + Y E+ E +LY + G + ++G YRS + NG+ Y
Sbjct: 169 IRQHFPFKKNQFYVMEAEQSLEPSLYVVSISYKGFYSKGLRGFYRSSFTQNNGQRVYFVA 228
Query: 487 TQFEATDARRCFPCWDEPAIKATFDITLQVPADRVALSNMPV 612
TQFE AR FPC+DEP +KATF+IT+ D VALSNMP+
Sbjct: 229 TQFEPVKAREAFPCFDEPGMKATFNITIAHRPDYVALSNMPI 270
>SB_35142| Best HMM Match : Peptidase_M1 (HMM E-Value=2e-13)
Length = 302
Score = 77.0 bits (181), Expect = 1e-14
Identities = 51/138 (36%), Positives = 77/138 (55%), Gaps = 2/138 (1%)
Frame = +1
Query: 109 RLPNNVIPKHYALELIPNLE-KFTFKGKTAVKVSIVNPTNVIVLNSLDLDLKNVKLQYND 285
RLP +V+P Y L + P L KF F GK A+ + +V T IVL+S L +K+ +L ND
Sbjct: 91 RLPKDVVPTKYTLTMHPVLSGKFDFTGKAAIDIKVVKNTKYIVLHSKKLKIKSYRL-VND 149
Query: 286 GSNSAIIPSSVELSTTDETASIYFSESLLEGEA-TLYSEFTGEINDKMKGLYRSKYIAPN 462
+ I + L+ E + + L++G+ T+ EF+GE+++KM G Y+S Y N
Sbjct: 150 KKENVKIARML-LNEKLEQLLLEPKQGLVKGQKFTIKLEFSGELSNKMAGFYKSSYKTRN 208
Query: 463 GEERYAAVTQFEATDARR 516
GE R A Q EA D+ +
Sbjct: 209 GEVRVWA--QKEALDSTK 224
>SB_11560| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 854
Score = 77.0 bits (181), Expect = 1e-14
Identities = 61/195 (31%), Positives = 93/195 (47%), Gaps = 28/195 (14%)
Frame = +1
Query: 109 RLPNNVIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNSLDLDLKNVKLQYNDG 288
RLP NVIP HY L L PNL TF+G+ + V ++ T I++++ + + + +
Sbjct: 94 RLPTNVIPVHYDLFLHPNLTTGTFEGEVEILVDVLQETEYILVHTNGMTVSKSSV-HEAT 152
Query: 289 SNSAIIPSSV-ELSTTDETASIYF--SESLLEGEATLYSEFTGEINDKMKGLYRSKY--- 450
S P +V E+ E F SE L G + ++ + ++ G Y S Y
Sbjct: 153 KESQKEPLAVKEMFEYKENFYYVFIMSEKLSVGRYIVRMDYRAPFSSELNGFYLSTYKDK 212
Query: 451 ----IAPNGE---ERYAAV---------------TQFEATDARRCFPCWDEPAIKATFDI 564
A +G+ + + A+ T+FE TDAR+ PC+DEPA+KATF
Sbjct: 213 RVFPYAKHGDGHNQGFKAIVSKAAFKLRIPKLATTKFEPTDARKALPCFDEPAMKATFTT 272
Query: 565 TLQVPADRVALSNMP 609
T+ D AL+NMP
Sbjct: 273 TIVHEPDYTALTNMP 287
>SB_37656| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 71.7 bits (168), Expect = 4e-13
Identities = 39/97 (40%), Positives = 57/97 (58%)
Frame = +1
Query: 208 IVNPTNVIVLNSLDLDLKNVKLQYNDGSNSAIIPSSVELSTTDETASIYFSESLLEGEAT 387
+ + T +VLNS+D+ + +V+ + + +A + DET + F SL G
Sbjct: 1 VKSSTEKVVLNSVDIKVNSVQFSCDAINFNA---QDISYQKDDETVTFTFPSSLPLGNGN 57
Query: 388 LYSEFTGEINDKMKGLYRSKYIAPNGEERYAAVTQFE 498
L +FTGE+NDKMKG YRSKY+ +E+Y AVTQFE
Sbjct: 58 LKLDFTGELNDKMKGFYRSKYM-DGEQEKYCAVTQFE 93
>SB_51392| Best HMM Match : Peptidase_M1 (HMM E-Value=0)
Length = 791
Score = 69.3 bits (162), Expect = 2e-12
Identities = 32/73 (43%), Positives = 43/73 (58%)
Frame = +1
Query: 385 TLYSEFTGEINDKMKGLYRSKYIAPNGEERYAAVTQFEATDARRCFPCWDEPAIKATFDI 564
T+ EF G + GL+R Y +G + Y TQFE AR FPC+DEPA+KATF+
Sbjct: 100 TVTYEFVGAYGQSVLGLFRGTYKKADGTDAYFVATQFEPHYARTAFPCFDEPALKATFNT 159
Query: 565 TLQVPADRVALSN 603
T+ P+D A +N
Sbjct: 160 TITHPSDMQAFTN 172
>SB_13904| Best HMM Match : Peptidase_M1 (HMM E-Value=3.7e-08)
Length = 326
Score = 64.1 bits (149), Expect = 9e-11
Identities = 28/48 (58%), Positives = 36/48 (75%)
Frame = +1
Query: 469 ERYAAVTQFEATDARRCFPCWDEPAIKATFDITLQVPADRVALSNMPV 612
+ Y A TQFE +DAR+ FPC DEPA+KATF++T+ A VAL NMP+
Sbjct: 211 DSYFAATQFERSDARKAFPCLDEPALKATFNVTIAHHARYVALCNMPI 258
Score = 40.3 bits (90), Expect = 0.001
Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 1/123 (0%)
Frame = +1
Query: 109 RLPNNVIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVL-NSLDLDLKNVKLQYND 285
RLP +VIP HY + L +++ F G+ + ++ T+V++L +S ++ K +
Sbjct: 33 RLPGDVIPTHYNINLNITVDQPHFHGRVNMFANVTRATSVLLLHSSKEMIFKRSAVWMVA 92
Query: 286 GSNSAIIPSSVELSTTDETASIYFSESLLEGEATLYSEFTGEINDKMKGLYRSKYIAPNG 465
+ + +E + +++L EG + + GLYRS + PNG
Sbjct: 93 STPEERQIKNSFYFDKNEYYVLEMADTLKEGRYRVELVYDAPFQILPYGLYRSSFERPNG 152
Query: 466 EER 474
+R
Sbjct: 153 SKR 155
>SB_32141| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 89
Score = 62.5 bits (145), Expect = 3e-10
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +1
Query: 475 YAAVTQFEATDARRCFPCWDEPAIKATFDITLQVPADRVALSNMPV 612
Y A T FE TDAR FPC+DEPA+KA F++ + A+ V+LSNMP+
Sbjct: 41 YLATTHFEPTDARAAFPCFDEPALKAVFNMVIYRKAEHVSLSNMPI 86
>SB_45004| Best HMM Match : Peptidase_M1 (HMM E-Value=0.0054)
Length = 236
Score = 57.6 bits (133), Expect = 7e-09
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Frame = +1
Query: 349 IYFSESLLEGEATLYSEFTGEINDKMKGLYRSKY-IAPNGEERYAAVTQFEATDARRCFP 525
I S L G+ +L F G + D++ GL+ Y IA N Y A +QF +AR FP
Sbjct: 28 IRMSRELTPGQYSLQVTFNGLLGDEV-GLFVGNYKIADNATRSYVA-SQFGPAEARSVFP 85
Query: 526 CWDEPAIKATFDITL 570
C+DEPA KATF++T+
Sbjct: 86 CFDEPAFKATFNLTI 100
>SB_16863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 43
Score = 53.6 bits (123), Expect = 1e-07
Identities = 21/34 (61%), Positives = 28/34 (82%)
Frame = +1
Query: 469 ERYAAVTQFEATDARRCFPCWDEPAIKATFDITL 570
+ Y A TQFE +DAR+ FPC DEPA+KATF++T+
Sbjct: 5 DSYFAATQFERSDARKAFPCLDEPALKATFNVTI 38
>SB_54833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 125
Score = 44.4 bits (100), Expect = 7e-05
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = +1
Query: 109 RLPNNVIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNS 243
RLP NVIP HY L L PNL TF+G+ + V ++ T I++++
Sbjct: 69 RLPTNVIPVHYDLFLHPNLTTGTFEGEVEILVDVLQETEYILVHT 113
>SB_7564| Best HMM Match : Peptidase_M1 (HMM E-Value=6.8e-08)
Length = 457
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +1
Query: 460 NGEERYAAVTQFEATDARRCFPCWDEPAIKATFDITLQVPADRVAL 597
+G++ TQ +A AR PC D P +KAT+ + VP D VAL
Sbjct: 74 SGKKHPYMFTQCQAIHARSIIPCQDSPGVKATYSAKVSVPKDLVAL 119
>SB_48126| Best HMM Match : RVT_1 (HMM E-Value=5.5e-39)
Length = 1510
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +1
Query: 109 RLPNNVIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLN 240
RLP NVIP +Y L L N++K + G + V++ T++++L+
Sbjct: 1446 RLPTNVIPNNYDLYLDVNMKKKNYTGSVNILVTVTQSTDLVILH 1489
>SB_45006| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 96
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +1
Query: 109 RLPNNVIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLN 240
RLP NVIP +Y L L N++K + G + V++ T++++L+
Sbjct: 32 RLPTNVIPNNYDLYLDVNMKKKNYTGSVNILVTVTQSTDLVILH 75
>SB_7838| Best HMM Match : Filamin (HMM E-Value=1.1e-22)
Length = 820
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +1
Query: 232 VLNSLDLDLKNVKLQYNDGSNSAIIPSSVELSTTDETASIYFSESLLEGEATLYSEFTGE 411
+L + L K L ND +N+ S L + +E + L EGE +EFT E
Sbjct: 519 MLTYIALFCKYENLMKNDRNNNTKSKLSTPLRSREEIVCKAYGTGLKEGELGKVAEFTVE 578
Query: 412 IN 417
+N
Sbjct: 579 LN 580
>SB_38519| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 172
Score = 28.3 bits (60), Expect = 5.2
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = +2
Query: 62 RSRKKK*QCQRTSRFNDFLIM*FLSIMHWN*FQIWKNLLSREKLR*KYRLLIQ 220
+ +K+K QCQR + + L LS HW F W++LL + R R+ +Q
Sbjct: 54 QEKKRKLQCQRNT--SKRLAALSLSRCHWLCFLTWQSLLIHREKRSFSRMKMQ 104
>SB_33033| Best HMM Match : G-patch (HMM E-Value=0.71)
Length = 696
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 445 KYIAPNGEERYAAVTQFEATDARRC 519
+ I GEE++A +T+FE D + C
Sbjct: 591 RLIRSEGEEKFADMTEFETVDLQNC 615
>SB_20213| Best HMM Match : MFS_1 (HMM E-Value=0.023)
Length = 247
Score = 27.9 bits (59), Expect = 6.9
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = -1
Query: 530 QQGKHRRASVASNWVTAAYRSSPLGAMYLLRYKPFILSFISPV 402
Q+GK + A V S + + SP+ A ++ R+ P ++S I +
Sbjct: 69 QEGKAKTAWVGSLAIALSMTFSPIAAKFIERFGPRLVSLIGGI 111
>SB_57109| Best HMM Match : DUF1280 (HMM E-Value=7.4)
Length = 605
Score = 27.5 bits (58), Expect = 9.1
Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +1
Query: 166 EKFTFKGKTAVKVSIVNPTNVIVLNSLDLDLKNVKLQ----YNDGSNSAIIPSSVELSTT 333
E +TF G T VKVS P I +S D D + +Q +ND S +P L T
Sbjct: 504 ENYTFTGLTQVKVSDNEPMGDI-QHSADNDSVDTAMQGTSHFNDACTSDSLPVRC-LQNT 561
Query: 334 DETAS 348
ET S
Sbjct: 562 KETHS 566
>SB_37154| Best HMM Match : WD40 (HMM E-Value=7.00649e-45)
Length = 870
Score = 27.5 bits (58), Expect = 9.1
Identities = 24/65 (36%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +1
Query: 166 EKFTFKGKTAVKVSIVNPTNVIVLNSLDLDLKNVKLQ----YNDGSNSAIIPSSVELSTT 333
E +TF G T VKVS P I +S D D + +Q +ND S +P L T
Sbjct: 504 ENYTFTGLTQVKVSDNEPMGDI-QHSADNDSVDTAMQGTSHFNDACTSDSLPVRC-LQNT 561
Query: 334 DETAS 348
ET S
Sbjct: 562 KETHS 566
>SB_44586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = +1
Query: 82 TMPENKPFQRLPNNVIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNSLDLDLK 261
++P N + + + P H ++L + EK +GK KV + T +V NSL++ L
Sbjct: 260 SLPTNTNLEDIQCTIKPAHIEVKL--SSEKKLLQGKLYAKVKPDDSTWTVVDNSLEIVLD 317
Query: 262 NV 267
V
Sbjct: 318 KV 319
>SB_13331| Best HMM Match : Peptidase_C5 (HMM E-Value=0.68)
Length = 457
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Frame = +1
Query: 55 TLAISKEKVTMPE-NKPFQRLPNNVIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNV- 228
T + E+V + K F L N +IPK LI N K + N TN+
Sbjct: 110 TAVVKTEQVESGKLTKKFNDLWNGLIPKRMVFGLITNAAYAGDYDKNPFNFFLTNVTNIE 169
Query: 229 IVLNSLDLDLKNVK 270
+ +N ++ N+K
Sbjct: 170 LRVNGVETPFTNIK 183
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.132 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,932,424
Number of Sequences: 59808
Number of extensions: 357647
Number of successful extensions: 983
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 979
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1512078125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -