Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11g23f
         (614 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    28   0.21 
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    25   2.6  
AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic acetylch...    25   2.6  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    25   2.6  
DQ013849-1|AAY40258.1|  264|Anopheles gambiae CYP325C2 protein.        24   3.4  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   5.9  
AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.         23   5.9  

>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 28.3 bits (60), Expect = 0.21
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 514 RCFPCWDEPAIKATFDITLQVPAD 585
           R +PC  EP I  T+++TLQ  +D
Sbjct: 221 RYYPCCTEPYIDITYNVTLQRQSD 244


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 484 VTQFEATDARRCFPCWDEPAIKATFDITLQ 573
           + +  A    + + C DEP +  TF+IT++
Sbjct: 211 ILEVPAVRNEKFYTCCDEPYLDITFNITMR 240


>AY705397-1|AAU12506.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 484 VTQFEATDARRCFPCWDEPAIKATFDITLQ 573
           + +  A    + + C DEP +  TF+IT++
Sbjct: 211 ILEVPAVRNEKFYTCCDEPYLDITFNITMR 240


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 24.6 bits (51), Expect = 2.6
 Identities = 9/30 (30%), Positives = 17/30 (56%)
 Frame = +1

Query: 484 VTQFEATDARRCFPCWDEPAIKATFDITLQ 573
           + +  A    + + C DEP +  TF+IT++
Sbjct: 207 ILEVPAVRNEKFYTCCDEPYLDITFNITMR 236


>DQ013849-1|AAY40258.1|  264|Anopheles gambiae CYP325C2 protein.
          Length = 264

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 11/35 (31%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
 Frame = +2

Query: 467 KNDMRLSP---NLKRQMHDDVSLAGMNLQLKLLLI 562
           K  +RL+P   N+ RQ   D+ +AG+++    L++
Sbjct: 128 KESLRLAPSGPNIARQTMKDIEIAGVHIPRDSLIV 162


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = -1

Query: 236  NTITFVGLTIDTFTAVFPLKVN 171
            NT   +G+T D +++ +P++ N
Sbjct: 3103 NTSNIIGITEDHYSSCYPIEYN 3124


>AY578796-1|AAT07301.1|  437|Anopheles gambiae Gbb-60A protein.
          Length = 437

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -2

Query: 388 ASLRLLVKILRNKYLLFHQLYSILLTMELSLN*SHRYTEVS 266
           A LRL  K+  NKY  ++   ++ +     LN     TE+S
Sbjct: 177 AELRLYRKLNLNKYTTYNTSLTLTVYALTELNGESEMTEIS 217


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.316    0.132    0.374 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 610,205
Number of Sequences: 2352
Number of extensions: 12038
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)