Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11g23f
(614 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g33090.1 68417.m04715 aminopeptidase M similar to SP|Q11011 P... 163 6e-41
At5g13520.1 68418.m01561 peptidase M1 family protein similar to ... 36 0.028
At3g53490.1 68416.m05905 expressed protein ADAM 13, Xenopus laev... 34 0.086
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 33 0.20
At3g01460.1 68416.m00070 PHD finger family protein / methyl-CpG ... 31 0.80
At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nea... 29 1.9
At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nea... 29 1.9
At2g14720.2 68415.m01657 vacuolar sorting receptor, putative ide... 29 1.9
At2g14720.1 68415.m01656 vacuolar sorting receptor, putative ide... 29 1.9
At3g46240.1 68416.m05005 protein kinase-related similar to light... 29 2.4
At3g29830.1 68416.m03796 F-box family protein contains Pfam:PF00... 29 2.4
At2g30290.1 68415.m03687 vacuolar sorting receptor, putative sim... 29 2.4
At2g24130.1 68415.m02883 leucine-rich repeat transmembrane prote... 29 3.2
At1g73960.1 68414.m08565 expressed protein similar to TATA bindi... 28 4.3
At3g50180.1 68416.m05486 hypothetical protein 28 5.7
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 28 5.7
At4g03620.1 68417.m00497 myosin heavy chain-related contains wea... 27 7.5
At2g34920.1 68415.m04287 ubiquitin-protein ligase-related contai... 27 7.5
At1g63730.1 68414.m07212 disease resistance protein (TIR-NBS-LRR... 27 7.5
At3g57130.1 68416.m06360 ankyrin repeat family protein / BTB/POZ... 27 9.9
At2g16870.1 68415.m01941 disease resistance protein (TIR-NBS-LRR... 27 9.9
>At4g33090.1 68417.m04715 aminopeptidase M similar to SP|Q11011
Puromycin-sensitive aminopeptidase (EC 3.4.11.-) (PSA)
{Mus musculus}; contains Pfam profile PF01433: Peptidase
family M1
Length = 879
Score = 163 bits (397), Expect = 6e-41
Identities = 88/177 (49%), Positives = 106/177 (59%), Gaps = 1/177 (0%)
Frame = +1
Query: 85 MPENKPFQRLPNNVIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNSLDLDLKN 264
M + K RLP +PK Y L L P+L TF G A+ + IV T IVLN+ DL + +
Sbjct: 1 MDQFKGEPRLPKFAVPKRYDLRLNPDLIACTFTGTVAIDLDIVADTRFIVLNAADLSVND 60
Query: 265 VKLQYNDGSNS-AIIPSSVELSTTDETASIYFSESLLEGEATLYSEFTGEINDKMKGLYR 441
+ + S+S A+ V L DE + F E L G L F G +NDKMKG YR
Sbjct: 61 ASVSFTPPSSSKALAAPKVVLFEEDEILVLEFGEILPHGVGVLKLGFNGVLNDKMKGFYR 120
Query: 442 SKYIAPNGEERYAAVTQFEATDARRCFPCWDEPAIKATFDITLQVPADRVALSNMPV 612
S Y NGE++ AVTQFE DARRCFPCWDEPA KATF ITL+VP D VALSNMP+
Sbjct: 121 STY-EHNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLEVPTDLVALSNMPI 176
>At5g13520.1 68418.m01561 peptidase M1 family protein similar to
SP|P09960 Leukotriene A-4 hydrolase (EC 3.3.2.6) (LTA-4
hydrolase) {Homo sapiens}; contains Pfam profile
PF01433: Peptidase family M1
Length = 616
Score = 35.5 bits (78), Expect = 0.028
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 487 TQFEATDARRCFPCWDEPAIKATFDITLQVP 579
TQ +A AR FPC D PA + +D+ + +P
Sbjct: 127 TQCQAIHARSIFPCQDTPAARIRYDVVMNIP 157
>At3g53490.1 68416.m05905 expressed protein ADAM 13, Xenopus laevis,
EMBL:XLU66003
Length = 225
Score = 33.9 bits (74), Expect = 0.086
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Frame = +1
Query: 331 TDETASIYFSESLLEGEATLYSEFTGEINDKMKGLYRSKY-IAPNGEERYAAVTQFEATD 507
T ++ I+ + + T++ + GE + + R+ + NGEE + +T+ + T
Sbjct: 35 TLDSVQIFTTHDWFSTKPTVFFQCKGENKTVLPDVKRTNVSYSFNGEESWQPLTELQGTK 94
Query: 508 ARRCFPCWDEPAIKATFDITLQVPADRVA 594
+RC D+P TFD P+D A
Sbjct: 95 CKRCGIYEDDPLKYDTFDEWELCPSDFTA 123
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 32.7 bits (71), Expect = 0.20
Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Frame = +1
Query: 190 TAVKVSIVNPTNVIVLNS--LDLDLKNVKLQYNDG----SNSAIIPSSVELSTTDETASI 351
+AV + + P N+ V + L+L K + + N S+S ++PSS TT TASI
Sbjct: 38 SAVASATMTPLNIEVPPNRLLELVAKGLAAENNGTLRGVSSSVLLPSSYGSITTPRTASI 97
Query: 352 YFSESLLEGEATLYSEFTGEINDKMKGLYRSKYIAPNG 465
FS + +G + + + + K + R +P+G
Sbjct: 98 DFSVNHAKGSSKTIPKHESKTLSEHKSVVRCARFSPDG 135
>At3g01460.1 68416.m00070 PHD finger family protein / methyl-CpG
binding domain-containing protein contains Pfam profiles
PF00628: PHD-finger (2 copies), PF01429: Methyl-CpG
binding domain
Length = 2176
Score = 30.7 bits (66), Expect = 0.80
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = +1
Query: 61 AISKEKVTMPENKPFQRLPNNVIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTN 225
++ +E++ P+ + R PNN P+ + L +F F G+T ++ + T+
Sbjct: 327 SLLQERLHTPKRRKTSRWPNNGFPEQKGSSVSAQLRRFPFNGQTMSPFAVKSGTH 381
>At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 29.5 bits (63), Expect = 1.9
Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = -3
Query: 96 VLWHC-HFFFRDRQCRTRCIN 37
+ W+C H F RQC+++CIN
Sbjct: 237 ITWYCPHAFTLSRQCKSQCIN 257
>At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 29.5 bits (63), Expect = 1.9
Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = -3
Query: 96 VLWHC-HFFFRDRQCRTRCIN 37
+ W+C H F RQC+++CIN
Sbjct: 237 ITWYCPHAFTLSRQCKSQCIN 257
>At2g14720.2 68415.m01657 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 29.5 bits (63), Expect = 1.9
Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = -3
Query: 96 VLWHC-HFFFRDRQCRTRCIN 37
+ W+C H F RQC+++CIN
Sbjct: 237 ITWYCPHAFTLSRQCKSQCIN 257
>At2g14720.1 68415.m01656 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 29.5 bits (63), Expect = 1.9
Identities = 10/21 (47%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
Frame = -3
Query: 96 VLWHC-HFFFRDRQCRTRCIN 37
+ W+C H F RQC+++CIN
Sbjct: 237 ITWYCPHAFTLSRQCKSQCIN 257
>At3g46240.1 68416.m05005 protein kinase-related similar to light
repressible receptor protein kinase (GI:1321686)
[Arabidopsis thaliana]
Length = 441
Score = 29.1 bits (62), Expect = 2.4
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -1
Query: 437 YKPFILSFI-SPVNSE*SVASPSSKDSEK*ILAVSSVVLNSTDDGIIAELEP 285
++P++L I SP E SV + S VSS+ + DDG+ AEL P
Sbjct: 111 FEPYLLELIFSPAGGETSVCFVRTSSSSNPF--VSSIEVVDLDDGMYAELGP 160
>At3g29830.1 68416.m03796 F-box family protein contains Pfam:PF00646
F-box domain
Length = 464
Score = 29.1 bits (62), Expect = 2.4
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +1
Query: 112 LPNNVIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNSLDLD 255
+ N +IP Y L +PN+E F + G V V N+I+L + LD
Sbjct: 224 IDNCIIPTMYCLLNLPNIEIFKYSGN--VIVFDFQKVNMILLKEVYLD 269
>At2g30290.1 68415.m03687 vacuolar sorting receptor, putative
similar to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737218
Length = 625
Score = 29.1 bits (62), Expect = 2.4
Identities = 10/21 (47%), Positives = 14/21 (66%), Gaps = 1/21 (4%)
Frame = -3
Query: 96 VLWHC-HFFFRDRQCRTRCIN 37
+ W+C F RQC+T+CIN
Sbjct: 236 ITWYCPEAFLASRQCKTQCIN 256
>At2g24130.1 68415.m02883 leucine-rich repeat transmembrane protein
kinase, putative
Length = 980
Score = 28.7 bits (61), Expect = 3.2
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 253 DLKNVKLQYNDGSNSAIIPSSVELSTTDETASIYFSESLLEGE 381
+L+N+KL N SN P +ELS D S+ S + L G+
Sbjct: 440 NLRNLKLYLNLSSNHLSGPIPLELSKMDMVLSVDLSSNELSGK 482
>At1g73960.1 68414.m08565 expressed protein similar to TATA binding
protein associated factor (GI:2827282) [Homo sapiens];
similar to Transcription initiation factor TFIID 150 kDa
subunit (TAFII-150) (TAFII150) (Swiss-Prot:Q24325)
[Drosophila melanogaster]
Length = 1390
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 508 ARRCFPCWDEPAIKATFDITLQVPADRVALS 600
AR FPC D+ + +FD+ VP + VA+S
Sbjct: 188 ARCWFPCIDDEYHRCSFDLEFTVPHNFVAVS 218
>At3g50180.1 68416.m05486 hypothetical protein
Length = 588
Score = 27.9 bits (59), Expect = 5.7
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = +1
Query: 256 LKNVKLQYNDGSNSAIIPSSVE-----LSTTDETASIYFSESLLEGEATLYSEFTGEIND 420
++NV+ Q N+ S ++P S+ L +T S ++EG T E+ I D
Sbjct: 103 VENVRRQ-NEESERVVLPKSISYEDQNLENQQDTRSKPGINEVVEGSGTKRLEWVISIKD 161
Query: 421 KMKGLYRS 444
K++ YR+
Sbjct: 162 KLEQAYRN 169
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 211 VNPTNVIVLNSLDLDLKNVKLQYNDGSNSAIIPSSV 318
V+PT +S DL L+ + + YN+ S +P +V
Sbjct: 30 VDPTGRYNGDSADLQLERINVYYNEASGGRYVPRAV 65
>At4g03620.1 68417.m00497 myosin heavy chain-related contains weak
similarity to Swiss-Prot:P24733 myosin heavy chain,
striated muscle [Aequipecten irradians]
Length = 342
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +2
Query: 416 MTK*KACTAVNTLLPMEKNDMRLSPN--LKRQMHDDVSLAGMNLQLKLLL 559
M++ +A +A + L+P + + SP ++ Q H+D L G+ +KLLL
Sbjct: 33 MSRLRAFSAPD-LVPSDSGSITSSPTRTIEHQSHEDSGLEGITTNVKLLL 81
>At2g34920.1 68415.m04287 ubiquitin-protein ligase-related contains
weak similarity to Ubiquitin-protein ligase E3 Mdm2 (EC
6.3.2.-) (p53-binding protein Mdm2) (Oncoprotein Mdm2)
(Double minute 2 protein) (Swiss-Prot:P23804) [Mus
musculus]
Length = 785
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +1
Query: 268 KLQYNDGSNSAIIPSSVELSTTDETASIYFSESLLEGEATLYSE 399
+L ++G NSAI S+E+S+ I+ ++GE+ +E
Sbjct: 229 RLNRSNGGNSAIHSQSIEISSEASVQEIHLLAPSIDGESESENE 272
>At1g63730.1 68414.m07212 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 966
Score = 27.5 bits (58), Expect = 7.5
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 520 NIVVHLSLQIG*QPHIVLLHWEQCIYCGTSL 428
N+ +HLS + P + LLHWE +Y G SL
Sbjct: 567 NVRLHLSEDMVFPPQLRLLHWE--VYPGKSL 595
>At3g57130.1 68416.m06360 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 467
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/53 (22%), Positives = 31/53 (58%)
Frame = +1
Query: 112 LPNNVIPKHYALELIPNLEKFTFKGKTAVKVSIVNPTNVIVLNSLDLDLKNVK 270
LP ++ KH +EL+ +E+ K+++ + + P + + ++LDL+ + ++
Sbjct: 200 LPQEILAKHLPIELVAKIEELRL--KSSMPLRSLMPHHHDLTSTLDLEDQKIR 250
>At2g16870.1 68415.m01941 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1109
Score = 27.1 bits (57), Expect = 9.9
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -2
Query: 523 GNIVVHLSLQIG*QPHIVLLHWEQCIYCGTSLSFC 419
GN ++H+ + P + LLHWE L FC
Sbjct: 564 GNNIMHIPEDMKFPPRLRLLHWEAYPSKSLPLGFC 598
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.132 0.374
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,605,683
Number of Sequences: 28952
Number of extensions: 254761
Number of successful extensions: 790
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 788
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1236350304
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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