Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11g22r
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    26   0.26 
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    26   0.26 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.80 
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.4  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   2.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   7.4  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   7.4  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   9.8  

>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 244 CTSLHNSGCGRRAEKQPPFFS 306
           C  +HN  CG R + +PP  S
Sbjct: 72  CDYIHNVDCGDRTQLEPPISS 92


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 244 CTSLHNSGCGRRAEKQPPFFS 306
           C  +HN  CG R + +PP  S
Sbjct: 72  CDYIHNVDCGDRTQLEPPISS 92


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.6 bits (51), Expect = 0.80
 Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 2/73 (2%)
 Frame = -2

Query: 457 YNITDVMAVSF--VLQKIIMMEDDNAIVAGILSILDLDTVKMGHFLQMTPMVMKKMVVAS 284
           Y++ +   ++F   L K  M+     I   +L I++ D  K+ H L  T  +   + + S
Sbjct: 161 YSVHEASIINFGYTLAKF-MIFTSTCIYTNLLRIIEADFSKLNHLLSGTENLDLVLPIYS 219

Query: 283 QLYVHNQNYEEMY 245
           QL    +   ++Y
Sbjct: 220 QLVFMCKKINKLY 232


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = +2

Query: 152  LYFFPPVIYNFFNRTTAPAIFYW 220
            LY++P  +Y++FN     ++ YW
Sbjct: 2529 LYYYPGDVYDYFNANF--SLNYW 2549


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/31 (29%), Positives = 19/31 (61%)
 Frame = +3

Query: 459 LSASYRPGMIRLTRGESEVAVLGNINIAPKL 551
           L+ ++R G+ R+  GE++   +  +N  PK+
Sbjct: 204 LNGAFRAGLERVQNGENQWISVMKVNKQPKV 234


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -2

Query: 280 LYVHNQNYEEMYKYIPKDILPV 215
           LY H  NY+  Y  +P   L +
Sbjct: 166 LYNHTANYDSKYLVLPSGELHI 187


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = -1

Query: 332 FLTNDSNGHEKNGGCFSALRPQPEL*RDVQIYP 234
           F+   S     NG  +  L+P   L R V I+P
Sbjct: 46  FINKSSTDKFGNGAIYEVLKPIYALMRIVGIFP 78


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +1

Query: 109 PYHIDHLLPTSH 144
           PYH +H+ PT++
Sbjct: 51  PYHANHVNPTAN 62


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,412
Number of Sequences: 336
Number of extensions: 4003
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)