Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11g22f
(648 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g55150.1 68418.m06876 F-box family protein similar to unknown... 34 0.094
At5g01330.1 68418.m00045 pyruvate decarboxylase, putative strong... 33 0.22
At4g33070.1 68417.m04711 pyruvate decarboxylase, putative strong... 33 0.22
At5g01320.1 68418.m00044 pyruvate decarboxylase, putative strong... 32 0.29
At4g02920.2 68417.m00396 expressed protein 32 0.38
At4g02920.1 68417.m00395 expressed protein 32 0.38
At4g19020.1 68417.m02803 chromomethylase 2 (CMT2) nearly identic... 30 1.2
At5g54960.1 68418.m06845 pyruvate decarboxylase, putative strong... 30 1.5
At3g19050.1 68416.m02420 kinesin motor protein-related contains ... 30 1.5
At4g00700.1 68417.m00096 C2 domain-containing protein contains I... 29 2.7
At5g25470.2 68418.m03029 expressed protein 29 3.5
At5g25470.1 68418.m03028 expressed protein 29 3.5
At4g20210.1 68417.m02954 terpene synthase/cyclase family protein... 28 6.1
At1g47230.1 68414.m05228 cyclin, putative similar to cyclin A-li... 28 6.1
At5g01100.1 68418.m00014 expressed protein similar to axi 1 [Nic... 27 8.1
At3g45610.1 68416.m04926 Dof-type zinc finger domain-containing ... 27 8.1
At3g06230.1 68416.m00716 mitogen-activated protein kinase kinase... 27 8.1
>At5g55150.1 68418.m06876 F-box family protein similar to unknown
protein (dbj|BAA95762.1) ; similar to SKP1 interacting
partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 360
Score = 33.9 bits (74), Expect = 0.094
Identities = 36/153 (23%), Positives = 70/153 (45%), Gaps = 3/153 (1%)
Frame = +2
Query: 20 VTMSVRALPPELAEKARKELNEDPSRINSDIQHLKDWLSKQPHLRARTDDQWLLAFLRGC 199
VT SV +LPP ++ + + L + + I D + LK+++ K + DD+W++ +
Sbjct: 104 VTKSVTSLPPLISFEDVQRLLQSQAII-PDSEALKNFIKKAVSSTSLLDDEWVVLVIYNT 162
Query: 200 KYSLERTKEKLDLYYSVRTTAPELFSIKPSNPLFDEILSLGAILILPKTATS-DSPRVSL 376
L + + + + A + I N +F I LG I +A + + +
Sbjct: 163 DRKLAFCRRGDKQWTDLESVASSVDDIVFCNGVFFAIDRLGEIYHCELSANNPKATPLCS 222
Query: 377 IIPGRYDADKYNI--TDVMAVSFVLQKIIMMED 469
P RYD+ K + +D + VL+K+ + +D
Sbjct: 223 TSPFRYDSCKKYLAESDYDELWVVLKKLELNDD 255
>At5g01330.1 68418.m00045 pyruvate decarboxylase, putative strong
similarity to pyruvate decarboxylase 1 [Vitis vinifera]
GI:10732644; contains InterPro entry IPR000399: Pyruvate
decarboxylase
Length = 592
Score = 32.7 bits (71), Expect = 0.22
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +2
Query: 86 DPSRINSDIQHLKDWLSKQPHLRARTDDQWL----LAFLRGCKYSLE 214
+P RIN+ QH++ LS + + A T D W L +GC Y +
Sbjct: 392 EPLRINAMFQHIQKMLSNETAVIAETGDSWFNCQKLKLPKGCGYEFQ 438
>At4g33070.1 68417.m04711 pyruvate decarboxylase, putative strong
similarity to SP|P51846 Pyruvate decarboxylase isozyme 2
(EC 4.1.1.1) (PDC) {Nicotiana tabacum}; contains
InterPro entry IPR000399: Pyruvate decarboxylase
Length = 607
Score = 32.7 bits (71), Expect = 0.22
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +2
Query: 80 NEDPSRINSDIQHLKDWLSKQPHLRARTDDQWL----LAFLRGCKYSLE 214
+ +P R+N+ QH++ LS + + A T D W L +GC Y +
Sbjct: 405 SREPLRVNTMFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQ 453
>At5g01320.1 68418.m00044 pyruvate decarboxylase, putative strong
similarity to pyruvate decarboxylase 1 [Vitis vinifera]
GI:10732644; contains InterPro entry IPR000399: Pyruvate
decarboxylase
Length = 603
Score = 32.3 bits (70), Expect = 0.29
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +2
Query: 86 DPSRINSDIQHLKDWLSKQPHLRARTDDQWL----LAFLRGCKYSLE 214
+P R+N+ QH++ LS + + A T D W L +GC Y +
Sbjct: 403 EPLRVNAMFQHIQKMLSSETAVIAETGDSWFNCQKLKLPKGCGYEFQ 449
>At4g02920.2 68417.m00396 expressed protein
Length = 419
Score = 31.9 bits (69), Expect = 0.38
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +2
Query: 242 YSVRTTAPELFSIKPSNPLFDEILSLGAILILPKTATSDSPRVSLIIP--GRYDADKYNI 415
+SVR+ LFS SNP +++LS+ + L + +T+ ++S +IP R+++D +
Sbjct: 178 FSVRSNGHVLFS-SSSNPELNDLLSIASEFNLSRNSTTKWRQLSPLIPHFQRFESDVFTP 236
Query: 416 TDVMAVS 436
+ AV+
Sbjct: 237 AKLKAVT 243
>At4g02920.1 68417.m00395 expressed protein
Length = 418
Score = 31.9 bits (69), Expect = 0.38
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Frame = +2
Query: 242 YSVRTTAPELFSIKPSNPLFDEILSLGAILILPKTATSDSPRVSLIIP--GRYDADKYNI 415
+SVR+ LFS SNP +++LS+ + L + +T+ ++S +IP R+++D +
Sbjct: 177 FSVRSNGHVLFS-SSSNPELNDLLSIASEFNLSRNSTTKWRQLSPLIPHFQRFESDVFTP 235
Query: 416 TDVMAVS 436
+ AV+
Sbjct: 236 AKLKAVT 242
>At4g19020.1 68417.m02803 chromomethylase 2 (CMT2) nearly identical
to chromomethylase CMT2 [Arabidopsis thaliana]
GI:14583094
Length = 1295
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = -1
Query: 444 KTKDTAMTSVMLYLSASYRPGMIRLTRGESEVAVLGNINIAPKLNISSNNGLLGFILNN 268
KT++ + S ++YLS S P I G++ L + L+ N G++ LNN
Sbjct: 441 KTREMHVNSTVIYLSDSDEPSSIEYLNGDN----LTQVESGSALSSGGNEGIVSLDLNN 495
>At5g54960.1 68418.m06845 pyruvate decarboxylase, putative strong
similarity to pyruvate decarboxylase 1 [Vitis vinifera]
GI:10732644; contains InterPro entry IPR000399: Pyruvate
decarboxylase
Length = 607
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Frame = +2
Query: 71 KELNEDPS---RINSDIQHLKDWLSKQPHLRARTDDQWL----LAFLRGCKYSLE 214
K L ++P+ R+N QH+++ LS + + A T D W L GC Y +
Sbjct: 399 KPLRDNPNESLRVNVLFQHIQNMLSSESAVLAETGDSWFNCQKLKLPEGCGYEFQ 453
>At3g19050.1 68416.m02420 kinesin motor protein-related contains Pfam
profile: PF00225 Kinesin motor domain; contains
non-consensus splice site (GC) at intron 12
Length = 2722
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +2
Query: 17 SVTMSVRALPPELAEKARKELNEDPSRINS---DIQHLKDWLSKQPHLRARTDDQWLLAF 187
S M + L ELA RK +E + D+ LK W+S+ R +D W
Sbjct: 1572 SSLMGIGNLVEELATVVRKLQDESSVALTGMAKDLSELKSWVSETNSARLFLEDIWSEII 1631
Query: 188 LRGCKYSL 211
++ C S+
Sbjct: 1632 MKDCAISV 1639
>At4g00700.1 68417.m00096 C2 domain-containing protein contains
INTERPRO:IPR000008 C2 domain
Length = 1006
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -3
Query: 631 RDIFVHLFIILVVDVELRSNHHFFHDHWSHL 539
RD V +IL+ D+E R + FHD W HL
Sbjct: 508 RDEPVGKAVILMNDIEKRIDDKPFHDRWVHL 538
>At5g25470.2 68418.m03029 expressed protein
Length = 280
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 263 PELFSIKPSNPLFDEILSLG-AILILPKT 346
PEL+ + P NP F + L+ G +L +PKT
Sbjct: 172 PELYLLNPKNPYFVKTLTKGNDVLYVPKT 200
>At5g25470.1 68418.m03028 expressed protein
Length = 280
Score = 28.7 bits (61), Expect = 3.5
Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +2
Query: 263 PELFSIKPSNPLFDEILSLG-AILILPKT 346
PEL+ + P NP F + L+ G +L +PKT
Sbjct: 172 PELYLLNPKNPYFVKTLTKGNDVLYVPKT 200
>At4g20210.1 68417.m02954 terpene synthase/cyclase family protein
(+)-delta-cadinene synthase isozyme XC14,
Gossypiumarboreum, PIR2:S68366
Length = 600
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = +2
Query: 125 DWLSKQPHLRARTDDQWLLAFLRGCKYSLERTKEKLDLYYSVRTTAPELFSIKPSNPLFD 304
D + KQPH +++ F+ GC ER YSV+ T E +I +N F
Sbjct: 378 DAMDKQPHYL-----KFVFKFIMGCFEEFERELASEGRSYSVKATLEEFKTIVKANFDFA 432
Query: 305 EILSLGAI 328
++ G +
Sbjct: 433 KLAHTGHV 440
>At1g47230.1 68414.m05228 cyclin, putative similar to cyclin A-like
protein [Nicotiana tabacum] GI:1064931, A-type cyclin
[Catharanthus roseus] GI:2190259; contains Pfam profiles
PF00134: Cyclin, N-terminal domain, PF02984: Cyclin,
C-terminal domain
Length = 369
Score = 27.9 bits (59), Expect = 6.1
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 7/201 (3%)
Frame = +2
Query: 11 KTSVTMSVRALPPELAEKARKELNEDPSRINSDIQH--LKDWLSK-----QPHLRARTDD 169
+ SV + R++ P++ E ++ + +H L D++ K PH+RA D
Sbjct: 77 EASVLIESRSVDPQMCEPFASDICAYLREMEGKPKHRPLPDYIEKVQSDLTPHMRAVLVD 136
Query: 170 QWLLAFLRGCKYSLERTKEKLDLYYSVRTTAPELFSIKPSNPLFDEILSLGAILILPKTA 349
WL+ E K D Y + S+KP N +++ + A+LI K
Sbjct: 137 -WLVEVA-------EEYKLVSDTLYLTISYVDRFLSVKPINRQKLQLVGVSAMLIASKYE 188
Query: 350 TSDSPRVSLIIPGRYDADKYNITDVMAVSFVLQKIIMMEDDNAIVAGILSILDLDTVKMG 529
P+V D ITD +F Q+++ ME D I+ + L T+K
Sbjct: 189 EIGPPKVE---------DFCYITD---NTFTKQEVVSMEAD--ILLALQFELGSPTIKT- 233
Query: 530 HFLQMTPMVMKKMVVASQLYV 592
FL+ V ++ SQL +
Sbjct: 234 -FLRRFTRVAQEDFKDSQLQI 253
>At5g01100.1 68418.m00014 expressed protein similar to axi 1
[Nicotiana tabacum] GI:559921; contains Pfam profile
PF03138: Plant protein family
Length = 631
Score = 27.5 bits (58), Expect = 8.1
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Frame = +2
Query: 44 PPELAEKARKELNEDPSRINSDIQHLKDWLS------KQPHLRARTD-DQWLLAFLRGCK 202
PP ++ R N + R + DI++L + LS +P+L ++ +LAF GC
Sbjct: 340 PPPSIQRLRCRANYEALRYSEDIENLSNVLSSRLRENNEPYLALHLRYEKDMLAF-TGCN 398
Query: 203 YSLERTKEKLDL 238
+SL +E +DL
Sbjct: 399 HSLS-NEESIDL 409
>At3g45610.1 68416.m04926 Dof-type zinc finger domain-containing
protein identical to dof6 zinc finger protein GI:5689615
from [Arabidopsis thaliana]
Length = 245
Score = 27.5 bits (58), Expect = 8.1
Identities = 23/85 (27%), Positives = 33/85 (38%), Gaps = 7/85 (8%)
Frame = +1
Query: 409 QHYRCHGCILCLTKDYYDGRRQRNSGRHFVNFRFRYCKNGSFLTNDSNG-----HEKNGG 573
Q RC C TK Y + R+F RY G L N G H+++
Sbjct: 38 QSLRCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGILRNIPIGGAYRKHKRSSS 97
Query: 574 CFSALR--PQPEL*RDVQIYP*GHF 642
+LR P+P + D + +P F
Sbjct: 98 ATKSLRTTPEPTMTHDGKSFPTASF 122
>At3g06230.1 68416.m00716 mitogen-activated protein kinase kinase
(MAPKK), putative (MKK8) mitogen-activated protein
kinase kinase (MAPKK) family, PMID:12119167
Length = 293
Score = 27.5 bits (58), Expect = 8.1
Identities = 14/54 (25%), Positives = 30/54 (55%)
Frame = +2
Query: 485 AGILSILDLDTVKMGHFLQMTPMVMKKMVVASQLYVHNQNYEEMYKYIPKDILP 646
+G +SIL +D + +G + + K++ + S+ + +NY +K + +DI P
Sbjct: 118 SGEVSIL-MDYMDLGSLESLRGVTEKQLALMSRQVLEGKNYLHEHKIVHRDIKP 170
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,107,228
Number of Sequences: 28952
Number of extensions: 283447
Number of successful extensions: 845
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1344285648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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