Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11g21r
(713 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 359 3e-98
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 334 9e-91
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 299 4e-80
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 260 3e-68
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 228 1e-58
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 218 1e-55
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 201 1e-50
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 198 8e-50
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 194 1e-48
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 182 6e-45
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 169 6e-41
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 149 9e-35
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 135 9e-31
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 124 3e-27
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 122 7e-27
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 122 7e-27
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 119 6e-26
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 97 4e-19
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 89 1e-16
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 88 2e-16
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 87 4e-16
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 86 9e-16
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 84 3e-15
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 84 4e-15
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 78 2e-13
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 74 4e-12
UniRef50_A1RXX5 Cluster: Ribosomal protein S3Ae; n=1; Thermofilu... 72 2e-11
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 71 2e-11
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 69 1e-10
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 69 2e-10
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 66 8e-10
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 64 4e-09
UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus... 64 4e-09
UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1; Methanocor... 62 1e-08
UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga... 60 4e-08
UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiell... 60 5e-08
UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 58 3e-07
UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 56 1e-06
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 54 3e-06
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 48 3e-04
UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno... 47 4e-04
UniRef50_Q74N14 Cluster: 30S ribosomal protein S3Ae; n=2; Nanoar... 39 0.14
UniRef50_A6FVI8 Cluster: Surface repeat protein, putative; n=2; ... 34 3.0
UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whol... 34 4.0
UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1; ... 33 5.3
UniRef50_Q751J3 Cluster: Serine/threonine-protein kinase TEL1; n... 33 5.3
UniRef50_Q119K9 Cluster: Putative uncharacterized protein precur... 33 7.0
UniRef50_A0YI31 Cluster: DNA mismatch repair protein; n=5; Cyano... 33 7.0
UniRef50_Q5GT20 Cluster: Predicted protein, WF-1; n=1; Wolbachia... 33 9.2
UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular org... 33 9.2
UniRef50_Q22Y97 Cluster: TPR Domain containing protein; n=1; Tet... 33 9.2
UniRef50_Q1DU10 Cluster: Predicted protein; n=1; Coccidioides im... 33 9.2
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 359 bits (884), Expect = 3e-98
Identities = 172/243 (70%), Positives = 200/243 (82%), Gaps = 6/243 (2%)
Frame = -3
Query: 711 KKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADT 532
KK+VDPFTRKDWYDVKAP+MF RQVG TLVNRTQGTKIAS+GLKGRVFEVSLADLQ +
Sbjct: 19 KKVVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLADLQNEP 78
Query: 531 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 352
DAERSFRKF+L+AE V GR+VL NFHGM LTTDKLR MVKKWQTLIE ++DVKTTDG++L
Sbjct: 79 DAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVKKWQTLIECSVDVKTTDGFML 138
Query: 351 RVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAK 172
RVFCIGFT KDS+SQRKTCYAQH+Q++ IR KM II R++T+++L+ VV KL+PDSIAK
Sbjct: 139 RVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAK 198
Query: 171 DIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXGDKS------ERP 10
DIEKAC +YPL DV IRKVKVLK+PRF++S LMELH + +RP
Sbjct: 199 DIEKACQVVYPLHDVYIRKVKVLKKPRFDLSSLMELHGDGGGKAAEVSTGAASGVVVDRP 258
Query: 9 EGY 1
EGY
Sbjct: 259 EGY 261
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 334 bits (822), Expect = 9e-91
Identities = 163/241 (67%), Positives = 192/241 (79%), Gaps = 4/241 (1%)
Frame = -3
Query: 711 KKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADT 532
KK+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLKGRVFEVSLADLQ D
Sbjct: 19 KKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVFEVSLADLQND- 77
Query: 531 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 352
E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+IEA++DVKTTDGY+L
Sbjct: 78 --EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLL 135
Query: 351 RVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAK 172
R+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++L+EVVNKLIPDSI K
Sbjct: 136 RLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGK 195
Query: 171 DIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXGD----KSERPEG 4
DIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH GD K ER +G
Sbjct: 196 DIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADG 255
Query: 3 Y 1
Y
Sbjct: 256 Y 256
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape)
Length = 656
Score = 299 bits (734), Expect = 4e-80
Identities = 142/217 (65%), Positives = 174/217 (80%)
Frame = -3
Query: 711 KKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADT 532
KK DPF +KDWYD+KAPS+F R VG TLV+RTQGTKIASEGLK RVFE+SLADLQAD
Sbjct: 413 KKAADPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEGLKHRVFEISLADLQADE 472
Query: 531 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 352
D +++RK RL AE VQGRNVL NF GMD TTDKLR +V+KWQTLIEA++DVKTTD Y L
Sbjct: 473 D--QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTL 530
Query: 351 RVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAK 172
R+FCI FT K +KTCYAQ +Q+R IR+KM EI+T T+ +L+E+V K IP+SI +
Sbjct: 531 RLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRKMREIMTNMATSCDLKELVKKFIPESIGR 590
Query: 171 DIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 61
+IEKA IYPL++V IRKVK+LK P+F++ KLME+H
Sbjct: 591 EIEKATSSIYPLQNVYIRKVKILKAPKFDLGKLMEVH 627
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 260 bits (636), Expect = 3e-68
Identities = 123/217 (56%), Positives = 163/217 (75%)
Frame = -3
Query: 711 KKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADT 532
KK DPF RKDWY +KAP+ F+ R VG TLVNR+ G K A++ LKGR+FEVSLADLQ D
Sbjct: 18 KKTQDPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIFEVSLADLQKDE 77
Query: 531 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 352
D +FRK +L + VQG+N L NFHG+D T+DKLR +V+KWQ+LIEAN+ VKTTD Y+L
Sbjct: 78 D--HAFRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSLIEANVTVKTTDDYLL 135
Query: 351 RVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAK 172
R+F I T + +KT YA +Q+RAIR+KM EII R+ + L+++ NKLIP+ I +
Sbjct: 136 RLFAIAVTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREASTCTLQQLTNKLIPEVIGR 195
Query: 171 DIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 61
+IEKA GIYPL++V IRKVK+LK+P+F++ L+ LH
Sbjct: 196 EIEKATQGIYPLQNVHIRKVKLLKQPKFDLGGLLALH 232
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 228 bits (557), Expect = 1e-58
Identities = 123/234 (52%), Positives = 164/234 (70%), Gaps = 18/234 (7%)
Frame = -3
Query: 708 KIVDPFTRKDWYDVKAPSMFSK----RQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQ 541
K VDPFTRK+WY V+AP+ F K +VG T VNRTQGTK+AS+GLKGRV+EVSLAD++
Sbjct: 14 KKVDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVYEVSLADMK 73
Query: 540 ADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDG 361
D + FRK +L AE V+GRNVL NF+GMDLT+DKLR ++ KW TLIE +DVKTTDG
Sbjct: 74 --DDESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLRSLIHKWSTLIECFVDVKTTDG 131
Query: 360 YVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLI--- 190
Y LRVF I FT K ++KT YA+ ++V+AIRKKM +I+T V++++L+ VV+ LI
Sbjct: 132 YFLRVFAICFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTETVSSNDLKTVVDYLIGVS 191
Query: 189 -----------PDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 61
++A+ I I+P+ +V IRKVKVLK P+ + +KL EL+
Sbjct: 192 LNGVTTNASGFAPTLAEKIRIEGSSIFPIHNVFIRKVKVLKTPKVDAAKLSELY 245
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 218 bits (532), Expect = 1e-55
Identities = 103/220 (46%), Positives = 149/220 (67%), Gaps = 3/220 (1%)
Frame = -3
Query: 711 KKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADT 532
K+ +DP +RK+WYD +AP FS + G TLV ++ G +IASE +KGRV E +LADL+ D
Sbjct: 20 KRTIDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVESTLADLK-DN 78
Query: 531 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 352
++++RK +L+ + V GRN +F+G+D+T D+L M++KWQTLIEA +D KT DGY++
Sbjct: 79 SNDKAWRKVKLVIDEVDGRNAKTSFYGLDITRDRLCSMIRKWQTLIEARVDCKTNDGYII 138
Query: 351 RVFCIGFTNKDSL---SQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDS 181
RVF + FT K S S TCYA+ +QVRAIR+K+ IT + + E LI +
Sbjct: 139 RVFTLAFTKKTSAGKQSSTSTCYAKSSQVRAIRRKINTFITNEAAKLGIAEFSKNLIGED 198
Query: 180 IAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 61
K IEK I+PL+++ IRKVKVLKRP+ + +K+ EL+
Sbjct: 199 YTKKIEKETKNIFPLQNITIRKVKVLKRPKLDATKIAELY 238
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 201 bits (491), Expect = 1e-50
Identities = 92/217 (42%), Positives = 147/217 (67%)
Frame = -3
Query: 711 KKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADT 532
KK +DP RK+W+++ AP F+ G T +N++ GT +A+E +KGRV E SLADLQ +
Sbjct: 16 KKTIDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGRVVEASLADLQGQS 75
Query: 531 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 352
D + ++RK +LI + V+G +F+G+D T DK+ M+KK QTLIE ++ ++ DGY+L
Sbjct: 76 D-QMAWRKVKLIIDDVEGTRCRTSFYGLDSTKDKIFGMIKKRQTLIETQVEARSQDGYIL 134
Query: 351 RVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAK 172
R+F I FT QRKT YAQ +Q++ IRKK+ EI+ ++V+ + +++ +S+AK
Sbjct: 135 RIFVIAFTKSIKNQQRKTTYAQRSQIKDIRKKIVEIVLKEVSKKSITQLLGFFNQESLAK 194
Query: 171 DIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 61
+I KA I+PL+++ +RKVK++KRP+ + KL E +
Sbjct: 195 EIGKATRTIFPLQNITLRKVKLVKRPKVDAQKLREFY 231
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 198 bits (484), Expect = 8e-50
Identities = 87/216 (40%), Positives = 142/216 (65%)
Frame = -3
Query: 708 KIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTD 529
K + RK+WYDV AP+ F KRQ T+ N+TQGT+IA++ L+GRVFE +LADL
Sbjct: 20 KAQETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEANLADLNQSAG 79
Query: 528 AERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLR 349
E ++RK R + VQGRN+L FH M++TTDK+ +++KW T +E ++VKT DGY +R
Sbjct: 80 EEEAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMANLLRKWCTTMETTVEVKTADGYTMR 139
Query: 348 VFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKD 169
+F + FT + Q + CYA+ V+ +R ++ ++I R ++ +++E V+ L + ++
Sbjct: 140 LFVVAFTKPQANQQSRNCYAKQRLVKWLRMRITKMIKRRLSKVQIKEAVSLLTRNVLSDA 199
Query: 168 IEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 61
+ + C+ I PLR++ IRKV+V++ P+F+ L+ H
Sbjct: 200 LVRRCNPILPLRELRIRKVRVVRTPKFDAQALLSAH 235
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 194 bits (474), Expect = 1e-48
Identities = 107/227 (47%), Positives = 145/227 (63%), Gaps = 1/227 (0%)
Frame = -3
Query: 687 RKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRK 508
+KD YDVKA +MF+ R +G T V R Q TK+ S GL G VFE SLA LQ D RK
Sbjct: 12 KKDRYDVKALTMFNVRNIGKTQVLRKQETKMVSVGLNGLVFEASLASLQNDKVV---VRK 68
Query: 507 FRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 328
F+LI E ++G+N L N +GMDLT DK V KWQ ++EA+ DVKT D Y+L +FC+G+T
Sbjct: 69 FKLITEDMRGKNGLTNSYGMDLTWDKRCNKVIKWQ-MVEAHADVKTADYYLLCLFCVGYT 127
Query: 327 -NKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACH 151
N + R+ AQ+ QV I +I+ D ++L+EV+NKL+PD++ KD+EKAC
Sbjct: 128 TNVTTRYARQLVCAQYQQVHQIWLITIQIM--DQRRTDLKEVLNKLVPDNVGKDVEKACQ 185
Query: 150 GIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXGDKSERP 10
IYPL DV +RKVK+L++P+ ++ KL ELH D+ E P
Sbjct: 186 FIYPLHDVFVRKVKILQKPKLDLGKLPELHALGLHGSHRKSDRYEPP 232
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 182 bits (444), Expect = 6e-45
Identities = 89/182 (48%), Positives = 126/182 (69%)
Frame = -3
Query: 711 KKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADT 532
+KI +PF++K+WY+VK P F +R VG +VN+T GT+IASE LKGRV EV+LADL +
Sbjct: 20 RKIAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGRVVEVNLADLMENE 79
Query: 531 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 352
KF+ E V G++ L FHG+ LTTDKLR +VKKW TLIE ++DVKTTDG+++
Sbjct: 80 KFGAYNYKFK--CEDVNGKDCLMIFHGLKLTTDKLRSIVKKWCTLIETSVDVKTTDGHLI 137
Query: 351 RVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAK 172
R+FCIGFT++ S +KT YA+ Q++ IRK M +IT++ + EL + V+ L + K
Sbjct: 138 RIFCIGFTSRKSNQIKKTSYAKSAQIKKIRKIMNNLITKEAASRELTQFVDYLKKTNFQK 197
Query: 171 DI 166
+
Sbjct: 198 KL 199
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 169 bits (411), Expect = 6e-41
Identities = 79/152 (51%), Positives = 106/152 (69%)
Frame = -3
Query: 516 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 337
FRKF+L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F I
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 66
Query: 336 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKA 157
FT K Q+ YAQ T+++ +R ++ E++ R+V +L+ VV KLIPDSI +D
Sbjct: 67 AFTKKQE-DQKSHAYAQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNE 125
Query: 156 CHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 61
I+PL +RKVKVLK+P+ ++ +++ELH
Sbjct: 126 ASSIFPLSGALVRKVKVLKKPKLDLGRILELH 157
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 149 bits (360), Expect = 9e-35
Identities = 77/217 (35%), Positives = 120/217 (55%)
Frame = -3
Query: 711 KKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADT 532
+K DP+ +K+WY V AP+ F R +G T V +T G ++A++ + RV+EV+L DL
Sbjct: 16 RKNPDPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAGLRVATDVINHRVYEVNLGDLNPGA 75
Query: 531 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 352
+ KF L + V L NFHGMD+T K + +K I+ +D+ TTDGY+L
Sbjct: 76 EDLNGNTKFYLQTQLVSDGKCLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTTDGYLL 135
Query: 351 RVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAK 172
RVF I FT++ +RK C+ + +R +R + E + ++ + +V KL +
Sbjct: 136 RVFVIAFTDRFRFQRRKNCHVKGRVIRMMRAGIYETLHNELGKVSIPVLVTKLSNFEVNA 195
Query: 171 DIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 61
+ +A I RDV IR+VKV+KRPR + L +H
Sbjct: 196 KLTEALQKITMCRDVMIRRVKVVKRPRNTMELLSTMH 232
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 135 bits (327), Expect = 9e-31
Identities = 70/116 (60%), Positives = 87/116 (75%)
Frame = -3
Query: 711 KKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADT 532
KK+VDPF++KDWYDV AP+MF+ R +G TLV RTQGTKIAS+ GRVFEVSLADLQ D
Sbjct: 19 KKVVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTKIASD---GRVFEVSLADLQND- 74
Query: 531 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTD 364
E +FRKF+LI E VQG+N L NFHG+DLT+DK+ ++K I +V+T D
Sbjct: 75 --EVAFRKFKLITEDVQGKNCLTNFHGVDLTSDKITSQIRKKMMEIMTR-EVQTND 127
Score = 113 bits (272), Expect = 4e-24
Identities = 56/93 (60%), Positives = 68/93 (73%), Gaps = 4/93 (4%)
Frame = -3
Query: 267 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRF 88
IRKKM EI+TR+V ++L+EVVNKLIPDSI KD+EKAC IYPL DV +RKVK+LK+P+F
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPLHDVFVRKVKMLKKPKF 170
Query: 87 EISKLMELHXXXXXXXXXXGD----KSERPEGY 1
E+ KLMELH GD K ER +GY
Sbjct: 171 ELGKLMELHGEGCSSGKATGDETGVKVERADGY 203
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 124 bits (298), Expect = 3e-27
Identities = 71/208 (34%), Positives = 114/208 (54%), Gaps = 2/208 (0%)
Frame = -3
Query: 711 KKIV-DPFTRKDWYDVKAPSMFS-KRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQA 538
KKI D F +K+W V P+ F+ KR +G T+ N+ ++ + + RV+E+S AD+
Sbjct: 13 KKIKQDSFIKKEWRHVLVPAYFTGKRDIGVTVSNKCARGRVPMDYVNNRVWELSHADMVN 72
Query: 537 DTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGY 358
D +R IA G V F GM LT DKL +++K++T+I+A++D KT DG+
Sbjct: 73 DLSHAYRLFSWRSIAA---GSEVYTQFAGMRLTHDKLDSIMRKYRTMIDASVDAKTADGF 129
Query: 357 VLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSI 178
+LR+F IGFT K + S + YA + R +R M + +T + + ++ + + I
Sbjct: 130 ILRLFTIGFTKKLANSHKNHTYANSHKARQVRDVMIKALTDACEANGVEQLCKDFVDEKI 189
Query: 177 AKDIEKACHGIYPLRDVCIRKVKVLKRP 94
+I + C I + V I KVKV+K P
Sbjct: 190 ENEIVEKCKQICQIESVYITKVKVIKAP 217
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 122 bits (295), Expect = 7e-27
Identities = 64/204 (31%), Positives = 113/204 (55%)
Frame = -3
Query: 711 KKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADT 532
KK D +R++ V AP +F + +G TL+ + + + ++++VSLAD+
Sbjct: 15 KKNQDVNSRQELIKVYAPDIFDSKLIGKTLIKKRNPAD-ENSSVDNKIYQVSLADILGKE 73
Query: 531 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 352
E S F + + FHG+ LT DK+ ++KKW TLIE ++ KT DGY L
Sbjct: 74 --EFSSINFNFKSLKIFNNECFTKFHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFL 131
Query: 351 RVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAK 172
++F I + K + KT Y +Q RA+R+++ +II ++ N ++++ ++++ I +
Sbjct: 132 KLFLIAQSKKPKNMKSKTVYINSSQKRALRRRITDIIIKEGINMDIKDFIHRIYSLKIYE 191
Query: 171 DIEKACHGIYPLRDVCIRKVKVLK 100
IE C I+P+ V IRK+KV++
Sbjct: 192 KIEINCSKIFPIHQVNIRKIKVVE 215
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 122 bits (295), Expect = 7e-27
Identities = 60/159 (37%), Positives = 98/159 (61%)
Frame = -3
Query: 576 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 397
GR ++V+ ADL + D RKF ++G + F GM+LT+DK + M+KKW TL
Sbjct: 15 GRRYDVNQADLTGNNDV--GHRKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTL 72
Query: 396 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 217
IEA D+ DG V RVF +G T + +KTCY +H+ + IRK M ++I +++ +
Sbjct: 73 IEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHSDEKKIRKIMFDVIEEELSGCD 132
Query: 216 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLK 100
+++++ KL +++ K IE+ I+PL++ C+RKVK +K
Sbjct: 133 VQKIMKKLANETVGKRIEELGSEIFPLQNCCVRKVKTIK 171
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 119 bits (287), Expect = 6e-26
Identities = 59/93 (63%), Positives = 71/93 (76%)
Frame = -3
Query: 711 KKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADT 532
KK VD ++KDWYD+KAP+MF+ R +G TLV RTQGTKIAS+GLKG VFE+SLADLQ D
Sbjct: 19 KKAVDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVFEMSLADLQND- 77
Query: 531 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTD 433
E +FRKF+LI E VQG+ L NF M L+ D
Sbjct: 78 --EVAFRKFKLITEDVQGKRCLINFRSMGLSCD 108
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 97.1 bits (231), Expect = 4e-19
Identities = 68/211 (32%), Positives = 108/211 (51%)
Frame = -3
Query: 708 KIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTD 529
K VD F K+WY V AP+ F++ +G TL + G I GRV E +L D+ D
Sbjct: 7 KKVDAFRAKNWYQVIAPAEFNRANIGETLAD-DPGKMI------GRVMESTLGDVTGDWT 59
Query: 528 AERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLR 349
+ FR+ E + G + +F G +LT D +R +VK+ + I+AN+ V T DG+ +R
Sbjct: 60 KQNIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSKIDANVVVTTKDGFKVR 117
Query: 348 VFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKD 169
V I T K A+ +Q+ +IR+ M ++ + E +N+++ +A +
Sbjct: 118 VKPIVLTVK---------RARTSQIESIRQIMINVVNKRGAELGFTEFINEVVTGKVASE 168
Query: 168 IEKACHGIYPLRDVCIRKVKVLKRPRFEISK 76
I K IYPLR V I K +++ RP +K
Sbjct: 169 IYKNTKNIYPLRRVEIGKSELVYRPAVAAAK 199
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 88.6 bits (210), Expect = 1e-16
Identities = 65/214 (30%), Positives = 105/214 (49%)
Frame = -3
Query: 711 KKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADT 532
+K+ D + K WY + P FS +++G T + K+ GRV E +L DL +
Sbjct: 11 RKVRDKWRSKVWYTIITPETFSSKEIGMTPADDPD--KVI-----GRVAESTLYDLSGNF 63
Query: 531 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 352
F++ VQG N F G D+TTD +R M+++ ++ I+ +V+T+DGY +
Sbjct: 64 KKMHVKLYFKI--NRVQGTNAYTRFIGHDMTTDYIRRMIRRRRSRIDMIFNVETSDGYRM 121
Query: 351 RVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAK 172
RV + ++ S KT IRKK+ E +T E V +I D +
Sbjct: 122 RVKVLTVPDRRIKSSIKT---------EIRKKIQEYLTEKARAMTFSEYVKYIISDDAPR 172
Query: 171 DIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLM 70
++ K IYP+R + IRK +VL P +I +L+
Sbjct: 173 ELSKELKVIYPVRRIEIRKSEVLHFPEEKIVELV 206
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 87.8 bits (208), Expect = 2e-16
Identities = 44/71 (61%), Positives = 49/71 (69%), Gaps = 4/71 (5%)
Frame = -3
Query: 201 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXGD- 25
NKLIPDSI KDIEKAC IYPL DV +RKVK+LK+P+FE+ KLMELH GD
Sbjct: 1 NKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGDSSSSGKAIGDE 60
Query: 24 ---KSERPEGY 1
K ER EGY
Sbjct: 61 TGAKVERAEGY 71
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 87.0 bits (206), Expect = 4e-16
Identities = 66/206 (32%), Positives = 100/206 (48%), Gaps = 4/206 (1%)
Frame = -3
Query: 699 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 520
D + K WY + AP MF +VG T + E + GRV E +L D+ D
Sbjct: 4 DKWKDKVWYTILAPDMFDNVEVGETPADDP-------EKVIGRVLETTLGDVLDDITKHH 56
Query: 519 SFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 340
FR+ V+G F G L D +R +V++ + I+ IDV T DGY +RV
Sbjct: 57 IKVFFRIYD--VEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAG 114
Query: 339 IGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLI----PDSIAK 172
+ FT T A+ +Q RAIRK+M ++I + + E + + + +SI +
Sbjct: 115 LAFT---------TRRAKTSQQRAIRKEMFKVIEENAKECDFDEFIRRCLSISEEESIPE 165
Query: 171 DIEKACHGIYPLRDVCIRKVKVLKRP 94
I++A IYP+R IRK +VL+ P
Sbjct: 166 QIKEAGRKIYPIRQAEIRKTEVLEEP 191
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 85.8 bits (203), Expect = 9e-16
Identities = 62/203 (30%), Positives = 105/203 (51%)
Frame = -3
Query: 702 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 523
+D + K+WY+++AP+ ++ VGTT+ L GR E ++ +L D
Sbjct: 10 LDGWKSKEWYNIEAPAYLNRVIVGTTMAGDPSL-------LVGRNVETTVGELT--NDMT 60
Query: 522 RSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 343
++ K L V G + G +LTTD +R +VK+ + I+AN+DV+T DG+V+RV
Sbjct: 61 KNNTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVK 120
Query: 342 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIE 163
FT K A+ +Q++AIR+ M +I+ + + ++ + + I ++ I
Sbjct: 121 PTCFTIK---------RARSSQMQAIREMMVDIVKKRASETDFETFMQEAILGRLSAAIY 171
Query: 162 KACHGIYPLRDVCIRKVKVLKRP 94
+ IYPLR V IRK +V P
Sbjct: 172 RQAKFIYPLRRVEIRKTQVEAMP 194
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 84.2 bits (199), Expect = 3e-15
Identities = 59/205 (28%), Positives = 100/205 (48%)
Frame = -3
Query: 708 KIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTD 529
++ D +T K W+ + AP F ++G T + +K+ GR E +LA+L D
Sbjct: 9 RVKDKWTLKKWFTLIAPEYFGMAELGETPAD--DASKVV-----GRTVETTLAELTNDYS 61
Query: 528 AERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLR 349
+ +++K V G N F +LT + L + ++ + IE +DV T DGY LR
Sbjct: 62 NQNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLR 121
Query: 348 VFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKD 169
V + FT + + KT +Q RAIR M +I+ ++ + + + + + +
Sbjct: 122 VKSVVFT----VRRCKT-----SQKRAIRAIMRQIVVEKASSLNFVQFLQECVLGKVPAE 172
Query: 168 IEKACHGIYPLRDVCIRKVKVLKRP 94
I K IYP+R V IRK+++L P
Sbjct: 173 IYKNAKKIYPIRRVEIRKIELLAEP 197
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 83.8 bits (198), Expect = 4e-15
Identities = 61/202 (30%), Positives = 96/202 (47%)
Frame = -3
Query: 699 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 520
DP+ K W+ V APS + N Q L R EVSL D+ D
Sbjct: 20 DPWALKKWFSVYAPSYLGGVFLAEVPANEAQK-------LLMRTLEVSLYDITKDISHLP 72
Query: 519 SFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 340
KF++ V+G L F G++LT D +R +V+K + + A +VKT DG V+R+
Sbjct: 73 IKLKFQI--HRVEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAV 130
Query: 339 IGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEK 160
+G T + +K+ A+RKKM E + + + + + +++ ++A D+
Sbjct: 131 LGITTHRIGTAQKS---------AMRKKMIETLVKKAAELDSGQFLKEILEGTLAADLFI 181
Query: 159 ACHGIYPLRDVCIRKVKVLKRP 94
I P+R V I K+KVLK P
Sbjct: 182 VAKKIAPMRKVEIAKIKVLKYP 203
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 77.8 bits (183), Expect = 2e-13
Identities = 64/208 (30%), Positives = 100/208 (48%), Gaps = 4/208 (1%)
Frame = -3
Query: 705 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDA 526
I D + K W+ V AP +F + +GTT + + L GRV E +L D+ D
Sbjct: 6 IRDTWRLKKWFKVVAPPLFGETVLGTTPADDP-------DKLIGRVMETTLFDITGDYSY 58
Query: 525 ERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRV 346
F+++ V+G F G +L D +R + ++ + + +V T DGY LRV
Sbjct: 59 VHVKMYFQVVR--VEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRV 116
Query: 345 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLI----PDSI 178
+ FT R+ C + +Q AIRK M EI+ + S L E++ ++ S+
Sbjct: 117 TAMAFT-------RQRC--KTSQKSAIRKVMQEIVEQKARESTLDELIQLMVFSDHEGSL 167
Query: 177 AKDIEKACHGIYPLRDVCIRKVKVLKRP 94
A I+++ IYPLR V I K K+L P
Sbjct: 168 AYLIDESARKIYPLRKVEIAKSKLLWVP 195
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 73.7 bits (173), Expect = 4e-12
Identities = 55/198 (27%), Positives = 92/198 (46%)
Frame = -3
Query: 687 RKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRK 508
+K WY V AP F ++++G TL + + GR +L +L D+ A +
Sbjct: 12 QKRWYSVLAPEQFDRQELGETLAEEP-------DQVVGRTITTTLGELTGDSGANNTKLT 64
Query: 507 FRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 328
F++ V F +LT D LR +V++ + +EA+I V TTD Y +RV + T
Sbjct: 65 FKITD--VGSDTAYTEFIKYELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALT 122
Query: 327 NKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHG 148
K A +Q +AIR+ M + + + V+ ++ +++ I
Sbjct: 123 TKK---------ADRSQEKAIRRVMIDKVHAAAEDRTFESFVDAIVEGNLSSAIYGDAKL 173
Query: 147 IYPLRDVCIRKVKVLKRP 94
IYPLR V I+K+ + RP
Sbjct: 174 IYPLRRVEIQKLTLEARP 191
>UniRef50_A1RXX5 Cluster: Ribosomal protein S3Ae; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S3Ae - Thermofilum
pendens (strain Hrk 5)
Length = 207
Score = 71.7 bits (168), Expect = 2e-11
Identities = 58/209 (27%), Positives = 101/209 (48%)
Frame = -3
Query: 708 KIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTD 529
K D ++ K W V AP F +G L+ + K GR EVS D+ D
Sbjct: 6 KTKDKWSMKKWIKVLAPKAFGFANLG--LIPADEPEKAL-----GRTVEVSFYDITKDVS 58
Query: 528 AERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLR 349
KF+++ V L M++T D +R +V++ + ++A +DV+T DG +R
Sbjct: 59 QLHIKLKFQIVK--VDDGIALTQLKLMEMTRDYIRSLVRRGTSRVDAILDVQTKDGVKMR 116
Query: 348 VFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKD 169
V + T +S+ KT +Q +AIR+ M +II+ + + + + + ++A +
Sbjct: 117 VMALAVT----VSRIKT-----SQKKAIRRIMFDIISEKAASLDFDTFIQQAVIGTMATE 167
Query: 168 IEKACHGIYPLRDVCIRKVKVLKRPRFEI 82
++ IYP++ V + K+KVL P EI
Sbjct: 168 MQMQAKKIYPIKKVEVYKIKVL-TPTTEI 195
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 71.3 bits (167), Expect = 2e-11
Identities = 51/198 (25%), Positives = 90/198 (45%)
Frame = -3
Query: 687 RKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRK 508
+K WY V+AP F + +G T + + GR E +L +L D +
Sbjct: 12 QKRWYTVQAPEQFDREVLGKTPAEEP-------DKVLGRTIETTLGELTNDASENNTKLT 64
Query: 507 FRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 328
F++ V + F +LT D LR +V++ + +EA I V TTD Y +++ + T
Sbjct: 65 FKI--NEVASDSAYTEFIRHELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVT 122
Query: 327 NKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHG 148
K A +Q +AIR+ M +++ + ++++ ++ ++ I
Sbjct: 123 TKK---------ADASQEKAIRRTMIDLVRETAEDHTFEQLIDSVVEGRLSSAIYGEAKD 173
Query: 147 IYPLRDVCIRKVKVLKRP 94
IYPLR V I+K + RP
Sbjct: 174 IYPLRRVEIKKTTLEARP 191
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 68.9 bits (161), Expect = 1e-10
Identities = 54/200 (27%), Positives = 90/200 (45%)
Frame = -3
Query: 699 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 520
D + K WYD+ P F +G T N L GR+ E+SL DL +
Sbjct: 17 DTWKSKVWYDIYTPQSFGGDVIGQTPANDPAN-------LIGRISEISLRDLTNEHSKHM 69
Query: 519 SFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 340
+ F++ + V G N F G D T + L+ V++ ++ I A ++V+T DG+ +RV
Sbjct: 70 TRMYFKV--DGVSGNNATSQFVGHDTTREYLKSQVRRRRSKINAIVEVRTKDGFKVRVKA 127
Query: 339 IGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEK 160
+ T + KT IR +M +II + E V+ ++ + I
Sbjct: 128 LVLTAVRARDHHKT---------EIRVRMEQIIKEMAKETPFAEFVHAMLMGGLGSKIYG 178
Query: 159 ACHGIYPLRDVCIRKVKVLK 100
C ++PL+ V I K +V++
Sbjct: 179 DCKKMFPLKRVEIFKSEVIE 198
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 68.5 bits (160), Expect = 2e-10
Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 1/209 (0%)
Frame = -3
Query: 699 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 520
D + K W+ + +P +F + +G+T T GR E +L DL D
Sbjct: 16 DKWKMKKWFSIYSPKVFGEVSLGSTPAFDVSQTM-------GRKVETTLYDLTGDFSTVY 68
Query: 519 SFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 340
F+++ +G + F G +L+ D +R +V++ + I +D+ T DG+ LRV
Sbjct: 69 VHLYFKVVRN--EGERLFTEFAGHELSRDYVRSLVRRKSSKINKVVDITTKDGFTLRVKT 126
Query: 339 IGFTNKDSLSQRKTCYAQH-TQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIE 163
+ T Y H Q IRK M +++ + E V ++I ++A +I
Sbjct: 127 LAL----------TAYRVHREQATTIRKIMEDVVKKTAEGKTFDEFVQEMIFGNLANNIF 176
Query: 162 KACHGIYPLRDVCIRKVKVLKRPRFEISK 76
I PLR I K KVL P + K
Sbjct: 177 NEAKKIAPLRKAEIEKSKVLFAPLIKEGK 205
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 66.1 bits (154), Expect = 8e-10
Identities = 50/203 (24%), Positives = 93/203 (45%)
Frame = -3
Query: 711 KKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADT 532
+++ D + K WY +K P F +++G T + L GR EV++ +L D
Sbjct: 8 RRVRDTWKEKSWYTIKTPVNFEDKEIGETPARDP-------DYLIGRGVEVTMRELSGDF 60
Query: 531 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 352
+ + K R + V G F G TTD +R M+++ + I+A+ VKT D +
Sbjct: 61 S--KQYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGTSRIDASSVVKTKDDRKV 118
Query: 351 RVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAK 172
++ + T T A+ +Q + +R+ + +++ E++ ++ +A
Sbjct: 119 KLHVLAVT---------TRRAKSSQQKYMRQVINDLLAETAAEKSFDELIKLVVNGKLAS 169
Query: 171 DIEKACHGIYPLRDVCIRKVKVL 103
++ IYPL+ V I K KVL
Sbjct: 170 EVYHNAKKIYPLKRVEIIKSKVL 192
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 63.7 bits (148), Expect = 4e-09
Identities = 51/205 (24%), Positives = 100/205 (48%), Gaps = 1/205 (0%)
Frame = -3
Query: 711 KKIVDPFTRKDWYDVKAPSM-FSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 535
+K D + K WY ++AP ++ + +G T+ + E + GR++E++ + D
Sbjct: 17 RKQRDKWKTKRWYTIRAPRHPWNYQNIGETIGE-------SDEHIIGRIYEMTQQEFNGD 69
Query: 534 TDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYV 355
+FR ++E V G++ L F G T+ +R +++++ I+ IDV T DGY+
Sbjct: 70 FTKMHVMLRFR-VSETV-GQDALTTFVGHHHQTNHIRRQIRRYRGKIDDVIDVVTEDGYL 127
Query: 354 LRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIA 175
+R+ + T K Q + ++IR K +++ V + + ++ S+
Sbjct: 128 VRIKPLIITQK---------RVQTSVKQSIRAKTRDVLLGYVAKTTYDALQVAMLDGSLE 178
Query: 174 KDIEKACHGIYPLRDVCIRKVKVLK 100
+I+ IYP R V IRK ++L+
Sbjct: 179 TEIQNQIKTIYPCRSVVIRKSQLLQ 203
>UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S3Ae -
Methanoregula boonei (strain 6A8)
Length = 201
Score = 63.7 bits (148), Expect = 4e-09
Identities = 53/199 (26%), Positives = 89/199 (44%)
Frame = -3
Query: 702 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 523
V+ + K W+ V P K +G T+ + E +KGR+ + +L ++ D +
Sbjct: 11 VEGWKAKSWFKVYTPDNLGKAYIGDTIASEV-------ETVKGRIMQATLGEITNDYAKQ 63
Query: 522 RSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 343
F+ IAE V G F G ++T D LR +VK+ + I+ ++ V T D +R+
Sbjct: 64 HIKMSFK-IAE-VTGDAAYTEFVGHEVTRDYLRSLVKRRSSRIDCHVQVVTKDNKKVRL- 120
Query: 342 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIE 163
++S A Q A+R + + +L +VN ++ I+KD+
Sbjct: 121 --------TISCYTFARANIAQEHALRNAITAGLVAQAQAWDLNTLVNGVVSGEISKDLF 172
Query: 162 KACHGIYPLRDVCIRKVKV 106
K +YP R V I K KV
Sbjct: 173 KLVKTLYPTRRVEIIKSKV 191
>UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S3Ae - Methanocorpusculum labreanum (strain ATCC 43576 /
DSM 4855 / Z)
Length = 206
Score = 62.5 bits (145), Expect = 1e-08
Identities = 49/197 (24%), Positives = 91/197 (46%), Gaps = 1/197 (0%)
Frame = -3
Query: 702 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAE 523
V+ + K+WY V AP K+ +G + + E + GRV VSL +L D +
Sbjct: 12 VEGWKAKNWYKVHAPEFLGKQFIGEIISSNP-------ENVPGRVLTVSLGELIQDYSKQ 64
Query: 522 RSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDG-YVLRV 346
F+++ V G F+G ++T + +R MVKK + +++ I V L+V
Sbjct: 65 NVRASFKIMN--VAGDAAYTQFNGHEMTKEFVRAMVKKRASRVDSTITVTPLGSTRELQV 122
Query: 345 FCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 166
FT +A+ +QV+ +R KM +++ ++ V+ ++ ++K +
Sbjct: 123 TITAFTIN---------HARLSQVQELRAKMVKVVEDSAKEADFESFVSAMLKGELSKKM 173
Query: 165 EKACHGIYPLRDVCIRK 115
C I+P+R + I K
Sbjct: 174 FAECKPIFPVRRIEIIK 190
>UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3Ae -
Caldivirga maquilingensis IC-167
Length = 221
Score = 60.5 bits (140), Expect = 4e-08
Identities = 50/162 (30%), Positives = 72/162 (44%)
Frame = -3
Query: 576 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 397
GR E +L DL D +FR+ V L F+GM+LT D +R +V++ +
Sbjct: 50 GRNVETTLYDLTKDLSHINVKLRFRVNG--VDDGRALTQFNGMELTRDYVRNLVRRGSSK 107
Query: 396 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 217
+ DV T DG LR+ + T T T IRK + + + + S+
Sbjct: 108 VMVIKDVTTKDGGKLRMEVLAIT---------TYRCTRTHKHLIRKSIMDRLDKVGQESD 158
Query: 216 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPR 91
+V I I D+ IYPLR V I K+KVL+ PR
Sbjct: 159 FDSLVRDSIMGKIQVDLFNVAKKIYPLRKVEIIKIKVLEYPR 200
>UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 215
Score = 60.1 bits (139), Expect = 5e-08
Identities = 44/193 (22%), Positives = 87/193 (45%), Gaps = 1/193 (0%)
Frame = -3
Query: 684 KDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKF 505
K+W V AP +F + +G + N+ + + R EVSL++L D S+ K
Sbjct: 25 KEWKIVIAPKIFEYKIIGYIINNKYTNNSGRLKEISKRNLEVSLSELINDYS---SYYKI 81
Query: 504 RLIAEYVQGRNVL-CNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 328
+ Y + + F+G L+ D + MV K L+E +I + T V+ +F + +T
Sbjct: 82 IKLQPYTMNKMFIRTTFNGFRLSYDFIFSMVLKPTKLVEFSIKINTLKKKVVEIFVL-YT 140
Query: 327 NKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHG 148
+L Y + +++R I ++ I + + N + + D I I++
Sbjct: 141 ITKNLHSNSITYGKRSRIRKINRESILCIKKMLENKPIDFIYKICCSDVIGNSIKRRSKR 200
Query: 147 IYPLRDVCIRKVK 109
+ P+++ I ++K
Sbjct: 201 VIPIKNFIISRIK 213
>UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasmatales|Rep: 30S ribosomal protein S3Ae -
Picrophilus torridus
Length = 209
Score = 57.6 bits (133), Expect = 3e-07
Identities = 52/202 (25%), Positives = 87/202 (43%), Gaps = 1/202 (0%)
Frame = -3
Query: 699 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLK-GRVFEVSLADLQADTDAE 523
D + K WY + APS +R++ + A L GR EV ++D +
Sbjct: 11 DKWKEKTWYTIVAPSFLGEREIALS--------PAADPSLMIGRKVEVPVSDFTGNFRKS 62
Query: 522 RSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 343
+ FR+ + G+ F G ++ D +R MV++ + I+ + KT DGY L V
Sbjct: 63 STMVIFRV--KECTGKRCTTEFIGHKVSDDTIRRMVRRRKERIDIIMPSKTKDGYRL-VI 119
Query: 342 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIE 163
I + L+ K +R K+ I + L E+ +I D++ DI
Sbjct: 120 KIVLVSDSKLTANKR--------GEVRSKIIGFINERCGSMTLPELAQYIIGDNVYNDIV 171
Query: 162 KACHGIYPLRDVCIRKVKVLKR 97
+YP++ + IRK +VL R
Sbjct: 172 DTLKDVYPIKKIEIRKSEVLGR 193
>UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasma|Rep: 30S ribosomal protein S3Ae -
Thermoplasma volcanium
Length = 215
Score = 55.6 bits (128), Expect = 1e-06
Identities = 54/217 (24%), Positives = 93/217 (42%)
Frame = -3
Query: 711 KKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADT 532
KK + + K WY V+AP ++V L S + RV EV +++L +
Sbjct: 8 KKGKEKWKEKVWYTVEAPPYLGSKEVSVALGED-------SNSMVNRVVEVPISELTGNF 60
Query: 531 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 352
FR+ +G F G + D +R +V++ + I+ DVKT+D ++
Sbjct: 61 KKSNEKALFRITN--CEGTKCKTIFIGHYIGDDYIRRLVRRRKERIDIIEDVKTSDNSII 118
Query: 351 RVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAK 172
V + T+ + +K IRK + + I + E V LI D I
Sbjct: 119 TVKIVVVTDGKVTNTKKF---------QIRKVLTDFILNKGLSLPYSEFVRYLIGDDIYN 169
Query: 171 DIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLMELH 61
D+ A IYPL+ + +RK +++ +S + E+H
Sbjct: 170 DMISATKDIYPLKKIEVRKSELV-----SLSGISEIH 201
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 54.4 bits (125), Expect = 3e-06
Identities = 49/212 (23%), Positives = 93/212 (43%)
Frame = -3
Query: 708 KIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTD 529
K+ D + K W + AP F+ V V T + KGRV EV+L D+
Sbjct: 7 KVKDKWRDKRWITIHAPDSFNS--VPAARVPITD-----DKHAKGRVIEVTLFDILKGDP 59
Query: 528 AERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLR 349
+ +++ + I + V + F + + + LR +V++ + + +DVKT+DGYV R
Sbjct: 60 QQNNYKIYFQI-DKVSEESATSIFKRYEYSKEYLRSLVRRGSSKVNYIVDVKTSDGYVFR 118
Query: 348 VFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKD 169
+ + T + + +K A+R + ++I V + + V I D
Sbjct: 119 LKVLALTYRHLNTSKK---------HALRLIIRDVIENTVPQMNIDQFVQAACYGKINSD 169
Query: 168 IEKACHGIYPLRDVCIRKVKVLKRPRFEISKL 73
I + +R + + KVK+++ +I+ L
Sbjct: 170 ILSRAKKLVKVRHMGLEKVKLVRTAEEQITLL 201
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
Frame = -3
Query: 135 RDVCIRKVKVLKRPRFEISKLMELHXXXXXXXXXXGD----KSERPEGY 1
R +C++KVK+LK+P+FE+ KLMELH GD K ER EGY
Sbjct: 63 RVMCLKKVKMLKKPKFELGKLMELHGDSSSSGKAIGDETGAKVERAEGY 111
Score = 45.6 bits (103), Expect = 0.001
Identities = 17/29 (58%), Positives = 24/29 (82%)
Frame = -3
Query: 711 KKIVDPFTRKDWYDVKAPSMFSKRQVGTT 625
KK++D F++KDWYDVKA +MF+ R +G T
Sbjct: 19 KKVIDQFSKKDWYDVKALAMFNIRNIGKT 47
>UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 168
Score = 47.2 bits (107), Expect = 4e-04
Identities = 28/78 (35%), Positives = 45/78 (57%)
Frame = +1
Query: 478 SLHIFGD*SEFAERPFRVSVSL*ISQGNFENSSLQSFRSNFRSLGTVDKRGADLPLAEHR 657
SLH+ G S+ + + L ISQGN ++S L+ FR + S + +K A++ AE R
Sbjct: 61 SLHVLGSQSDLPVG--MILIVLNISQGNLKHSVLEPFRGDLGSQSSANKGFANISDAEDR 118
Query: 658 RSLDIVPIFASEWVDNLL 711
R L+++P+ S+ V LL
Sbjct: 119 RRLNVIPVLLSKRVGCLL 136
>UniRef50_Q74N14 Cluster: 30S ribosomal protein S3Ae; n=2;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S3Ae -
Nanoarchaeum equitans
Length = 198
Score = 38.7 bits (86), Expect = 0.14
Identities = 47/200 (23%), Positives = 90/200 (45%), Gaps = 1/200 (0%)
Frame = -3
Query: 711 KKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADT 532
KK D + RK W+ +KAP++F++ ++G T + E + GR E+++A + +
Sbjct: 5 KKYAD-WKRKIWFTIKAPAIFNEVELGETPAYK-------PEQVIGRRVELNMALVTNNY 56
Query: 531 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 352
+ F++ V+G G+ + ++ V+ + I + +K D ++
Sbjct: 57 QLQNYKGIFKITK--VEGTTAKTELEGIKMYESIIQKWVEPGRDKITDSFVIKDKDNRLV 114
Query: 351 RVFCIGFTNKDSLSQRKTCYAQHTQVRAI-RKKMCEIITRDVTNSELREVVNKLIPDSIA 175
RV + TN R+ Q T +R I R E+ + + +++NK IP+ +
Sbjct: 115 RVKPVLITN------RRLHRKQGTAIRNIWRNYFVELGKKLSFEDMVMKILNKEIPEQLK 168
Query: 174 KDIEKACHGIYPLRDVCIRK 115
I+K IYP IR+
Sbjct: 169 IQIKK----IYPPLFFAIRQ 184
>UniRef50_A6FVI8 Cluster: Surface repeat protein, putative; n=2;
cellular organisms|Rep: Surface repeat protein, putative
- Roseobacter sp. AzwK-3b
Length = 5954
Score = 34.3 bits (75), Expect = 3.0
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +1
Query: 4 ALRPFRLVSGFPLASTAFAVKFHQLR-DLETGPLQHFHLSDANIAQRVDAMAGLLDVLGN 180
AL RL + P+ V QL D+ TGP+ H + D Q V A GL+D+ GN
Sbjct: 5486 ALSVLRLGALVPVGPDGLGVALDQLDLDVTTGPV-HLNERDGIDLQSVIARDGLIDIFGN 5544
Query: 181 GV 186
G+
Sbjct: 5545 GL 5546
>UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF13769, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 556
Score = 33.9 bits (74), Expect = 4.0
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = +2
Query: 380 SMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSAC 544
S+L S+ +C L++ +SLS+ S+ + +LRPC ++ ++L LS VS C
Sbjct: 389 SVLVSLSLCLSLSVLVSLSLSSSLSLSVPVSLRPCLSLSVLVSL--SLSVPVSLC 441
>UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 3702
Score = 33.5 bits (73), Expect = 5.3
Identities = 27/106 (25%), Positives = 52/106 (49%)
Frame = -3
Query: 483 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQR 304
Q ++ CN G+D+ D+++ V + +ID D VF G D+L R
Sbjct: 517 QAFDLFCNARGLDVLVDRIKAEVNR-------DIDDGAADRMSDSVF--GEPGPDNLYGR 567
Query: 303 KTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 166
+ + + + +R++ K + +++ T LR +VN +PDS+ + I
Sbjct: 568 LS-FGRASLLRSMFKTITQMMASTGTGDGLRNLVNTSLPDSLKRII 612
>UniRef50_Q751J3 Cluster: Serine/threonine-protein kinase TEL1; n=2;
Eukaryota|Rep: Serine/threonine-protein kinase TEL1 -
Ashbya gossypii (Yeast) (Eremothecium gossypii)
Length = 2768
Score = 33.5 bits (73), Expect = 5.3
Identities = 23/83 (27%), Positives = 38/83 (45%)
Frame = +2
Query: 74 NFEISKRGLFNTFTFRMQTSRRG*MPWQAFSMSLAMESGINLFTTSLSSELVTSRVMISH 253
N + GLF TF RM T + M W ++++ +L T LSS L+ +R
Sbjct: 2010 NSSVEHYGLFKTFARRMSTIQSAKMLWSQNETVMSIDMLKDLLHTPLSSNLI-ARARKQP 2068
Query: 254 IFFLIALT*VCWA*HVLRWLKES 322
F +A+ + +++WL S
Sbjct: 2069 FFQQMAILDINVKAQLVQWLSHS 2091
>UniRef50_Q119K9 Cluster: Putative uncharacterized protein precursor;
n=1; Trichodesmium erythraeum IMS101|Rep: Putative
uncharacterized protein precursor - Trichodesmium
erythraeum (strain IMS101)
Length = 2322
Score = 33.1 bits (72), Expect = 7.0
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 229 DVACNDFTHFLSDCSDLSVLGVARLALAQGVLIGET 336
+V NDF LSD ++S LG+A +A G+LI T
Sbjct: 2048 EVGLNDFQLMLSDRLEMSFLGIANFQVAGGLLINGT 2083
>UniRef50_A0YI31 Cluster: DNA mismatch repair protein; n=5;
Cyanobacteria|Rep: DNA mismatch repair protein - Lyngbya
sp. PCC 8106
Length = 563
Score = 33.1 bits (72), Expect = 7.0
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = +2
Query: 431 LSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSAS--VSACRSARETSKTLPFNPSEAIFV 604
L VR++P ++ + C + I L+L KDL A+ +ACRSA L + +
Sbjct: 463 LWAVRTVP-EMLAQREDCHDALIELSLGKDLQAAQVATACRSAIRNGTPLSLTEMQTLLE 521
Query: 605 PWVR 616
WVR
Sbjct: 522 QWVR 525
>UniRef50_Q5GT20 Cluster: Predicted protein, WF-1; n=1; Wolbachia
endosymbiont strain TRS of Brugia malayi|Rep: Predicted
protein, WF-1 - Wolbachia sp. subsp. Brugia malayi
(strain TRS)
Length = 128
Score = 32.7 bits (71), Expect = 9.2
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = -3
Query: 252 CEIITRDVTNSELREVVNK---LIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFE 85
CE + D+ N ++VNK + D + DI+ I +DV I VKV+ P+ E
Sbjct: 42 CEKVKSDLKNPAYEDIVNKDTQIQEDGLVVDIDNCYFYIKYPQDVIIEVVKVINSPKVE 100
>UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular
organisms|Rep: L-Amino-acid oxidase - Ralstonia eutropha
(strain ATCC 17699 / H16 / DSM 428 / Stanier
337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier337))
Length = 434
Score = 32.7 bits (71), Expect = 9.2
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 449 WTSQPISSGGWL--KNGRLSSKPTLM*RQPMDTFYVSSALVSPI 324
W + P S GGW+ + G L+ LM RQP + + A ++PI
Sbjct: 363 WANDPFSKGGWMHHRPGNLTQAAPLM-RQPHGRIHFAGADIAPI 405
>UniRef50_Q22Y97 Cluster: TPR Domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: TPR Domain containing
protein - Tetrahymena thermophila SB210
Length = 553
Score = 32.7 bits (71), Expect = 9.2
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = -3
Query: 306 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEK 160
R CY + Q++ + + D TNSE+ +VNKL +SI K +K
Sbjct: 496 RAKCYVEMKQMQEAIEDYIQCYKLDPTNSEVGVIVNKLKQESILKKKDK 544
>UniRef50_Q1DU10 Cluster: Predicted protein; n=1; Coccidioides
immitis|Rep: Predicted protein - Coccidioides immitis
Length = 363
Score = 32.7 bits (71), Expect = 9.2
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -3
Query: 219 ELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKVLKRPRFEISKLME 67
EL V + +P + AK + CH Y L D ++ +K RFE L+E
Sbjct: 60 ELLWEVTRHLPPASAKMLAYTCHKFYHLSDTWLKNIKFFPVERFETLCLLE 110
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 727,949,444
Number of Sequences: 1657284
Number of extensions: 15179000
Number of successful extensions: 46178
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 44377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46128
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57438021881
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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