Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11g19r
         (429 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0115 + 27783170-27783331,27783510-27783705,27783825-27784411     33   0.074
01_01_1014 - 8022787-8023935                                           28   3.7  
09_04_0302 + 16501020-16501049,16501568-16501659,16502063-165021...    27   4.9  
08_01_0356 + 3131214-3132443,3132584-3132778,3132892-3132972,313...    27   4.9  
04_04_0965 - 29762388-29762564,29764272-29766361,29766567-297671...    27   4.9  
06_03_1511 - 30669292-30669401,30669894-30669930,30670012-306701...    27   6.4  
10_01_0162 + 1820761-1821855                                           27   8.5  
06_01_0407 + 2901321-2901739,2902673-2902825,2902899-2902981,290...    27   8.5  

>05_07_0115 + 27783170-27783331,27783510-27783705,27783825-27784411
          Length = 314

 Score = 33.5 bits (73), Expect = 0.074
 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
 Frame = -3

Query: 226 WCDSYLADCRLEVYSTQQ-----YAHQGHPSPASGSVTVRDCPRCGGRCRLEHRHSSVHK 62
           WC+S+ +D R  V S+        A  G  + AS +V V+ CP CG R R E   +++  
Sbjct: 3   WCNSF-SDVRTAVDSSLSPAAAVAAAAGKKAAASLAVLVKMCPSCGHRARYEQETTTIQD 61

Query: 61  L 59
           L
Sbjct: 62  L 62


>01_01_1014 - 8022787-8023935
          Length = 382

 Score = 27.9 bits (59), Expect = 3.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -3

Query: 232 HPWCDSYLADCRLEVYSTQQYAHQGHPSPASGSVTV 125
           HP+   Y  +  L  YS   Y  +  P+PASG+ T+
Sbjct: 139 HPFAILYPGNVGLLCYSISFYVAELQPAPASGTATL 174


>09_04_0302 +
           16501020-16501049,16501568-16501659,16502063-16502198,
           16502297-16502727,16502950-16503028
          Length = 255

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -3

Query: 226 WCDSYLADCRLEVYSTQQYAHQGHPSPAS 140
           W ++Y  D  +E+Y+ Q++ HQ  P PA+
Sbjct: 54  WAENY--DKVMELYNVQRFNHQAVPLPAT 80


>08_01_0356 +
           3131214-3132443,3132584-3132778,3132892-3132972,
           3133324-3133383,3133466-3133560,3133660-3133816,
           3133896-3134021,3134398-3134478,3134557-3134647,
           3134735-3134868,3135068-3135136,3135219-3135308,
           3135405-3135508,3135594-3135762,3136066-3136134
          Length = 916

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 148 DSDGPDAHTVGCCIPQVDNL 207
           + D  +A TVGCC  +VDN+
Sbjct: 647 EKDEDEAETVGCCTLKVDNV 666


>04_04_0965 - 29762388-29762564,29764272-29766361,29766567-29767170,
            29768395-29768637,29768704-29770203
          Length = 1537

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = -3

Query: 187  YSTQQYAHQGHPSPASGSVTVRDCPRCGGRCR 92
            Y  Q     G   PA+ S   R C   GG CR
Sbjct: 1371 YQPQHVEISGGEQPAAASCVFRPCEAAGGGCR 1402


>06_03_1511 - 30669292-30669401,30669894-30669930,30670012-30670107,
            30670186-30670281,30670679-30670828,30670956-30671100,
            30671178-30671251,30671325-30671445,30671697-30671821,
            30671898-30672047,30672249-30672324,30672496-30672557,
            30672597-30672839,30673354-30673683,30673776-30673932,
            30674008-30674139,30674219-30674277,30674734-30674798,
            30674878-30675094,30675413-30675499,30675655-30675750,
            30675938-30676003,30676096-30676287,30676380-30676532,
            30676812-30677052,30677322-30677515,30678212-30678348,
            30678474-30678480,30678708-30678830,30679370-30679427,
            30680018-30680090,30680493-30681765
          Length = 1714

 Score = 27.1 bits (57), Expect = 6.4
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +2

Query: 251  SLSFEAXVPMLKTRALLVELGSATSLVDTATTAVNTNKRANFILQNRSELK 403
            S + E  V + +T AL  E+ SA S +  A   +  NKR    +   +ELK
Sbjct: 848  SRALEFPVELTETSALSCEISSAKSWLKKACDCLEQNKRGIVDIDFLNELK 898


>10_01_0162 + 1820761-1821855
          Length = 364

 Score = 26.6 bits (56), Expect = 8.5
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = -1

Query: 279 IGTXASNDRLLRS-FSVTRGVTATSQIVDLRYTAP 178
           + T A+ND   +S   + R V AT+  + LRYTAP
Sbjct: 39  VSTGAANDDGAQSSVRLPRQVGATASALSLRYTAP 73


>06_01_0407 +
           2901321-2901739,2902673-2902825,2902899-2902981,
           2903081-2903180,2904580-2904693,2905292-2905434,
           2905825-2905919
          Length = 368

 Score = 26.6 bits (56), Expect = 8.5
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 154 PSPASGSVTVRDCPRCGGRCRLEHRHSSVHK 62
           P     S+ V D P+C G C  E +   +H+
Sbjct: 321 PECTESSIAVWDIPKCSGLCHPEVKMLELHR 351


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,703,990
Number of Sequences: 37544
Number of extensions: 208746
Number of successful extensions: 524
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 524
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 802495716
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)