Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11g19r
         (429 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            24   2.6  
Z49814-1|CAA89968.1|  137|Anopheles gambiae serine proteinase pr...    23   3.5  
AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding pr...    23   3.5  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   4.6  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   6.1  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    22   8.0  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 16/45 (35%), Positives = 18/45 (40%)
 Frame = -3

Query: 223 CDSYLADCRLEVYSTQQYAHQGHPSPASGSVTVRDCPRCGGRCRL 89
           CD Y  DC++E        H       S S  V DC R G   RL
Sbjct: 747 CDFYACDCKMECPKQCTCYHD-----QSWSSNVVDCSRAGYDDRL 786


>Z49814-1|CAA89968.1|  137|Anopheles gambiae serine proteinase
           protein.
          Length = 137

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -2

Query: 167 ASGPSESGKWERHSSRLSALWGAVSAGTPSLFGS 66
           + GP ++ +++   +  S + G VS GTP + GS
Sbjct: 42  SGGPLQTLRYDLLGNIFSFIVGVVSFGTPCVEGS 75


>AY146759-1|AAO12074.1|  356|Anopheles gambiae odorant-binding
           protein AgamOBP45 protein.
          Length = 356

 Score = 23.4 bits (48), Expect = 3.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 173 LLGAVYLKSTICEVAVTP 226
           +L A   K T+CEVAV P
Sbjct: 275 VLQAAAAKMTVCEVAVEP 292


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.0 bits (47), Expect = 4.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 118 CPRCGGRCRLEHRH 77
           CP C GRC  E +H
Sbjct: 674 CPTCAGRCN-EFKH 686


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 22.6 bits (46), Expect = 6.1
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 187 IPQVDNLRGSCHTT 228
           IP V+ L+G  HTT
Sbjct: 906 IPSVEQLKGKIHTT 919


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +2

Query: 5   DQPKRPQICTLKLNPLR 55
           D+P R   C  + NPLR
Sbjct: 87  DRPMRALFCLTRTNPLR 103


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 402,116
Number of Sequences: 2352
Number of extensions: 7610
Number of successful extensions: 54
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 35292513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)