Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11g19r
(429 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g53290.1 68414.m06040 galactosyltransferase family protein co... 30 0.58
At1g33400.1 68414.m04135 tetratricopeptide repeat (TPR)-containi... 30 0.58
At1g62970.1 68414.m07110 DNAJ heat shock N-terminal domain-conta... 30 0.77
At5g64360.3 68418.m08085 DNAJ heat shock N-terminal domain-conta... 29 1.0
At5g64360.2 68418.m08084 DNAJ heat shock N-terminal domain-conta... 29 1.0
At5g64360.1 68418.m08083 DNAJ heat shock N-terminal domain-conta... 29 1.0
At2g26100.1 68415.m03132 galactosyltransferase family protein co... 29 1.8
At3g14960.1 68416.m01892 galactosyltransferase family protein co... 28 3.1
At5g56870.1 68418.m07097 beta-galactosidase, putative / lactase,... 27 4.1
At5g53750.1 68418.m06679 expressed protein strong similarity to ... 27 4.1
At5g24280.1 68418.m02856 expressed protein ; expression supporte... 27 4.1
At2g02620.1 68415.m00201 DC1 domain-containing protein / PHD fin... 27 4.1
At4g27890.1 68417.m04003 nuclear movement family protein contain... 27 7.1
At5g47040.1 68418.m05797 Lon protease homolog 1, mitochondrial (... 26 9.4
At3g57480.1 68416.m06399 zinc finger (C2H2 type, AN1-like) famil... 26 9.4
At3g11880.1 68416.m01456 expressed protein 26 9.4
At2g03070.1 68415.m00260 expressed protein 26 9.4
>At1g53290.1 68414.m06040 galactosyltransferase family protein
contains Pfam profile: PF01762 galactosyltransferase
;contains similarity to Avr9 elicitor response protein
GI:4138265 from [Nicotiana tabacum]
Length = 345
Score = 30.3 bits (65), Expect = 0.58
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -3
Query: 154 PSPASGSVTVRDCPRCGGRCRLEHRHSSVHK 62
P + SV V D P+C G C E R +HK
Sbjct: 300 PECSPSSVAVWDIPKCSGLCNPEKRMLELHK 330
>At1g33400.1 68414.m04135 tetratricopeptide repeat (TPR)-containing
protein contains Pfam profile PF00515 TPR Domain
Length = 798
Score = 30.3 bits (65), Expect = 0.58
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
Frame = -3
Query: 151 SPASGSVTVRD--CPRCGGRCRLEHRHSSVHK 62
S SGS+ + C +CG RC +E+ H+ V+K
Sbjct: 620 SKPSGSLHIEPEICLKCGSRCDIENSHAEVNK 651
>At1g62970.1 68414.m07110 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226: DnaJ domain
Length = 797
Score = 29.9 bits (64), Expect = 0.77
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 105 PQRGQSRTVTLPLAGLGWP*CAYCWVLY 188
P+ G +RT + P W C YC+VLY
Sbjct: 629 PKSGAARTDSEPEVSSFWTTCPYCYVLY 656
>At5g64360.3 68418.m08085 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226 DnaJ domain
Length = 464
Score = 29.5 bits (63), Expect = 1.0
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 102 PPQRGQSRTVTL--PLAGLGWP*CAYCWVLY 188
PP R QS+ T P+A W C YC+VL+
Sbjct: 176 PPPRSQSQAGTSADPMATSFWTACPYCFVLF 206
>At5g64360.2 68418.m08084 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226 DnaJ domain
Length = 464
Score = 29.5 bits (63), Expect = 1.0
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 102 PPQRGQSRTVTL--PLAGLGWP*CAYCWVLY 188
PP R QS+ T P+A W C YC+VL+
Sbjct: 176 PPPRSQSQAGTSADPMATSFWTACPYCFVLF 206
>At5g64360.1 68418.m08083 DNAJ heat shock N-terminal
domain-containing protein low similarity to AHM1
[Triticum aestivum] GI:6691467; contains Pfam profile
PF00226 DnaJ domain
Length = 422
Score = 29.5 bits (63), Expect = 1.0
Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 102 PPQRGQSRTVTL--PLAGLGWP*CAYCWVLY 188
PP R QS+ T P+A W C YC+VL+
Sbjct: 176 PPPRSQSQAGTSADPMATSFWTACPYCFVLF 206
>At2g26100.1 68415.m03132 galactosyltransferase family protein
contains Pfam profile: PF01762 galactosyltransferase
Length = 371
Score = 28.7 bits (61), Expect = 1.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 157 HPSPASGSVTVRDCPRCGGRCRLEHRHSSVHK 62
H SP S + V D P+C G C E R +HK
Sbjct: 325 HCSPKS--IAVWDIPKCSGLCDPESRLKELHK 354
>At3g14960.1 68416.m01892 galactosyltransferase family protein
contains Pfam profile: PF01762 galactosyltransferase
Length = 343
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -3
Query: 154 PSPASGSVTVRDCPRCGGRCRLEHRHSSVHKL 59
P + S+ V D P+C G C E R +H L
Sbjct: 298 PECSPYSIAVWDIPKCSGLCNPEKRMLELHML 329
>At5g56870.1 68418.m07097 beta-galactosidase, putative / lactase,
putative similar to beta-galactosidase precursor
GI:3869280 from [Carica papaya]
Length = 724
Score = 27.5 bits (58), Expect = 4.1
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -3
Query: 229 PWCDSYLADCRLEVYST 179
PW S L DC+ EVY+T
Sbjct: 398 PWSVSILPDCKTEVYNT 414
>At5g53750.1 68418.m06679 expressed protein strong similarity to
unknown protein (pir||T08938)
Length = 427
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/83 (21%), Positives = 37/83 (44%)
Frame = +2
Query: 176 LGAVYLKSTICEVAVTPRVTEKLRNSLSFEAXVPMLKTRALLVELGSATSLVDTATTAVN 355
LG + + IC ++ L ++ V + K+RAL+V + S+ SL++ +
Sbjct: 65 LGKICMADVICYLSKFDNNVLSLSSAFDASVSVLLPKSRALVVHVQSSCSLIEAIDLIIK 124
Query: 356 TNKRANFILQNRSELKFRLKSQL 424
+ + +S K R + +L
Sbjct: 125 GAQNLIVPIHTKSITKRRQQQKL 147
>At5g24280.1 68418.m02856 expressed protein ; expression supported by
MPSS
Length = 1634
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +2
Query: 278 MLKTRALLVELGSATSLVDTATTAVNTNKRANFILQNRSELKFRLK 415
+L R+ + L S TSL+D A + ++ N + R EL+ RLK
Sbjct: 1271 VLAIRSSSLALSSETSLMDMAQYTEDLKEKINIDEERRVELEERLK 1316
>At2g02620.1 68415.m00201 DC1 domain-containing protein / PHD finger
protein-related contains Pfam profiles PF03107: DC1
domain, weak hit to PF00628: PHD-finger
Length = 513
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = -3
Query: 223 CDSYLADCRLEVYS---TQQYAHQGHPSPASGSVTVRDCPRCGGRCRLEHRHSSVHKL 59
CD DC L+V ++ + +QGHP P ++ ++ P C C + + VHKL
Sbjct: 323 CDKEGCDCVLDVVCASVSEPFDYQGHPHPLFLALDPKEKPIC-NIC----KSTKVHKL 375
>At4g27890.1 68417.m04003 nuclear movement family protein contains
Pfam profile: PF03593 nuclear movement protein
Length = 293
Score = 26.6 bits (56), Expect = 7.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 303 WNWGQPLH*LTPRRPRSIRTKERTSSCRIEVN 398
++WGQ L +T P TK R+ +C I+ N
Sbjct: 136 YSWGQNLQEVTINIPMPEGTKSRSVTCEIKKN 167
>At5g47040.1 68418.m05797 Lon protease homolog 1, mitochondrial
(LON) identical to Lon protease homolog 1 mitochondrial
precursor SP:O64948 from [Arabidopsis thaliana]
Length = 888
Score = 26.2 bits (55), Expect = 9.4
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Frame = +2
Query: 254 LSFEAXVPMLKTRALLVELGSATSLVDTATTAVNTNKRANFILQ---NRSELKFRLKSQL 424
+SFE + ML + L V L AT LVD ++ ++ ++ ++S+ ++ L+ Q+
Sbjct: 226 MSFEEQLSMLDSVDLKVRLSKATELVDRHLQSIRVAEKITQKVEGQLSKSQKEYLLRQQM 285
>At3g57480.1 68416.m06399 zinc finger (C2H2 type, AN1-like) family
protein contains Pfam domain, PF00096: Zinc finger, C2H2
type; contains Pfam domain, PF01428: AN1-like Zinc
finger
Length = 249
Score = 26.2 bits (55), Expect = 9.4
Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Frame = -3
Query: 214 YLADCRLEVYSTQQYAHQGHPSPAS--GSVTVRDCPRCGGRCRL 89
+ D L+VY ++ H P G VTV CP C RL
Sbjct: 26 FTCDRCLQVYCLDHRSYMKHDCPKGNRGDVTVVICPLCAKGVRL 69
>At3g11880.1 68416.m01456 expressed protein
Length = 443
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 224 PRVTEKLRNSLSFEAXVPMLKTRALLVELGS 316
P +E+++ + FEA P+LK AL E GS
Sbjct: 260 PASSERVKATERFEAIYPLLKEVALACEPGS 290
>At2g03070.1 68415.m00260 expressed protein
Length = 524
Score = 26.2 bits (55), Expect = 9.4
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Frame = +2
Query: 224 PRVTEKLRNSLSFEAXVPMLKTRALLVELGSATSLVD-TATTAVNTNKRANFILQNRSEL 400
P V EKL L E + LKTRA+ + A L D A NT + IL S +
Sbjct: 11 PPVAEKLNPKLEKELNLESLKTRAVSLAKAIARILEDFDAYGRTNTTPKWQDILGQYSMV 70
Query: 401 KFRL 412
L
Sbjct: 71 NLEL 74
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,323,517
Number of Sequences: 28952
Number of extensions: 153705
Number of successful extensions: 379
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 377
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 379
length of database: 12,070,560
effective HSP length: 74
effective length of database: 9,928,112
effective search space used: 675111616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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