Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11g18r
         (624 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    29   0.042
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   3.6  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.8  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   8.4  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   8.4  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   8.4  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 28.7 bits (61), Expect = 0.042
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 63  FLQNKEEYKIYIVLSKLSGFY 1
           F+Q  +EYK Y +LS LSG +
Sbjct: 152 FVQRNQEYKYYQILSHLSGIF 172


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +3

Query: 132 LFFVTPDRILMSFDLLLVE 188
           +FF  P R+LM FD+ + E
Sbjct: 219 VFFTVP-RVLMYFDIFITE 236


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/28 (25%), Positives = 16/28 (57%)
 Frame = -3

Query: 601 AICIPHLNHICNFSSYLKKKQPSFKIYI 518
           AIC+  L +  +    + +++P  KI++
Sbjct: 467 AICVSQLKNALSIDKGILREKPDVKIFL 494


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/22 (27%), Positives = 15/22 (68%)
 Frame = -2

Query: 188 FHQEQIKRHEDAIRRHKEQMSD 123
           +++   + HE+ + RH E+++D
Sbjct: 103 YNEPYQRTHENMLLRHHEEVAD 124


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/22 (27%), Positives = 15/22 (68%)
 Frame = -2

Query: 188 FHQEQIKRHEDAIRRHKEQMSD 123
           +++   + HE+ + RH E+++D
Sbjct: 103 YNEPYQRTHENMLLRHHEEVAD 124


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 6/22 (27%), Positives = 15/22 (68%)
 Frame = -2

Query: 188 FHQEQIKRHEDAIRRHKEQMSD 123
           +++   + HE+ + RH E+++D
Sbjct: 103 YNEPYQRTHENMLLRHHEEVAD 124


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,614
Number of Sequences: 336
Number of extensions: 2477
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)