Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11g15r
(681 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_9601| Best HMM Match : Trypsin (HMM E-Value=0) 51 1e-06
SB_21520| Best HMM Match : Trypsin (HMM E-Value=0) 47 2e-05
SB_21575| Best HMM Match : Trypsin (HMM E-Value=0) 46 2e-05
SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45) 46 3e-05
SB_33085| Best HMM Match : Trypsin (HMM E-Value=0) 45 7e-05
SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_51536| Best HMM Match : Trypsin (HMM E-Value=0) 45 7e-05
SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_25649| Best HMM Match : Trypsin (HMM E-Value=0) 44 9e-05
SB_35182| Best HMM Match : CUB (HMM E-Value=0) 44 2e-04
SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0) 42 3e-04
SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30) 42 3e-04
SB_31846| Best HMM Match : Trypsin (HMM E-Value=0) 42 5e-04
SB_42238| Best HMM Match : Trypsin (HMM E-Value=0) 42 6e-04
SB_10327| Best HMM Match : Trypsin (HMM E-Value=0) 42 6e-04
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_56478| Best HMM Match : Trypsin (HMM E-Value=0) 38 0.006
SB_1442| Best HMM Match : SRCR (HMM E-Value=0) 38 0.008
SB_2871| Best HMM Match : TSP_C (HMM E-Value=8e-11) 37 0.013
SB_10167| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.023
SB_43527| Best HMM Match : Trypsin (HMM E-Value=0) 36 0.030
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 36 0.030
SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.030
SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.040
SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.053
SB_4906| Best HMM Match : Trypsin (HMM E-Value=0) 35 0.053
SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23) 34 0.12
SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_28897| Best HMM Match : Trypsin (HMM E-Value=0) 33 0.16
SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22) 33 0.21
SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.28
SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.37
SB_50961| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.49
SB_30267| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.49
SB_26911| Best HMM Match : Trypsin (HMM E-Value=0) 32 0.49
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.49
SB_24109| Best HMM Match : Trypsin (HMM E-Value=4.6e-06) 31 0.86
SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16) 31 1.1
SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40) 30 2.0
SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0) 29 2.6
SB_28641| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_55505| Best HMM Match : Trypsin (HMM E-Value=0) 29 4.6
SB_49208| Best HMM Match : G_glu_transpept (HMM E-Value=0) 28 6.1
SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44) 28 8.0
SB_25813| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
SB_19093| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.0
>SB_9601| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 285
Score = 50.8 bits (116), Expect = 1e-06
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Frame = -1
Query: 615 DIGXIDFGRKIEFNDYIQPIRLQRSADKNRNYD-NVRLVAXXXXXXXXXXXSPENLNWVF 439
DI I+ R + FN ++QPI + R N ++ N P LN+V
Sbjct: 128 DIALIELDRPVVFNFHVQPICIMRP---NISFKWNTACFISGWGHTRWNGSQPNVLNFVM 184
Query: 438 LNGISNLRCMVAYNFSPTIQPSTICTLGYNDTTQSTCQGDSGGPLTVIDEDGQITQVGVT 259
+ +S+ C +++ TI + +C GY + +C+ DSGGPL + G+ VG+
Sbjct: 185 VPLVSHATCNKPLSYNGTIHETALCA-GYERGLKDSCEFDSGGPL-ACQKGGRYYAVGLV 242
Query: 258 SF 253
S+
Sbjct: 243 SW 244
>SB_21520| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 800
Score = 46.8 bits (106), Expect = 2e-05
Identities = 35/153 (22%), Positives = 56/153 (36%)
Frame = -1
Query: 618 HDIGXIDFGRKIEFNDYIQPIRLQRSADKNRNYDNVRLVAXXXXXXXXXXXSPENLNWVF 439
HD+ I + F+ + P+ L + D N N L
Sbjct: 401 HDLALIRLAKPAAFSAKVSPVCLPKQGDLLGNEKNCYTTGWGRVSGSMMFFMATKLQQAR 460
Query: 438 LNGISNLRCMVAYNFSPTIQPSTICTLGYNDTTQSTCQGDSGGPLTVIDEDGQITQVGVT 259
+ + C + + + + IC G + S C GDSGGPL V E G G
Sbjct: 461 TPVVDHETCAIKLDKFAADKTTMICAGG---SGSSACSGDSGGPL-VCHEGGTWVLRGAV 516
Query: 258 SFVSSEGCHVDIPSGFIRPGHYLDWFKTVTGLD 160
S+ +S C + + R ++DW + +T D
Sbjct: 517 SWGTSHSCPGRMFVAYARISSHIDWIERITSGD 549
>SB_21575| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 696
Score = 46.4 bits (105), Expect = 2e-05
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = -1
Query: 429 ISNLRCMVAYNFSPTIQPSTICTLGYN-DTTQSTCQGDSGGPLTVIDEDGQITQVGVTSF 253
+S C AY I+P + +G+N + S+CQGDSGGPL V +E+G+ G TSF
Sbjct: 472 VSKEDCKRAYG--AIIRPYSHICVGFNTENAASSCQGDSGGPL-VCEEEGRWVLHGATSF 528
Query: 252 VSSEGCHVDIPSGFIRPGHYLDW 184
+ C S + R Y+ W
Sbjct: 529 --GKSCSPKHYSVYTRVNSYMKW 549
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/55 (40%), Positives = 28/55 (50%)
Frame = -1
Query: 330 CQGDSGGPLTVIDEDGQITQVGVTSFVSSEGCHVDIPSGFIRPGHYLDWFKTVTG 166
C GDSGGPL V +++G+ G S+ C + F R Y DW K VTG
Sbjct: 262 CNGDSGGPL-VCEDNGRWYLHGAVSY-GKLHCPTTYYTVFARVASYTDWIKQVTG 314
>SB_3824| Best HMM Match : Trypsin (HMM E-Value=2.8026e-45)
Length = 234
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/68 (36%), Positives = 33/68 (48%)
Frame = -1
Query: 369 ICTLGYNDTTQSTCQGDSGGPLTVIDEDGQITQVGVTSFVSSEGCHVDIPSGFIRPGHYL 190
+C CQGDSGGPL V + +GQ T GV SF + C V + + + +YL
Sbjct: 114 LCAGEAKPNAAGACQGDSGGPL-VCERNGQWTLYGVVSF-GAGNCEVTSYTVYTKVSNYL 171
Query: 189 DWFKTVTG 166
DW G
Sbjct: 172 DWITKRAG 179
>SB_33085| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 537
Score = 44.8 bits (101), Expect = 7e-05
Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 1/140 (0%)
Frame = -1
Query: 669 KYINHPEYSENLNVVQPHDIGXIDFGRKIEFNDYIQPIRLQRSADKNRNYDNVRLVAXXX 490
+ I+H YS N +D + R + F Y+QP+ L D + + V
Sbjct: 373 RIISHANYSYN---TVDYDYALLKLTRPLNFTQYVQPVCLP---DSDFPAGTLCYVTGWG 426
Query: 489 XXXXXXXXSPENLNWVFLNGISNLRCMVAY-NFSPTIQPSTICTLGYNDTTQSTCQGDSG 313
SP L V L +++ +C Y S I P C G ++ C GDSG
Sbjct: 427 STNYRGSPSPNYLQEVGLPLVNHSQCHATYLTASRKITPRMRCA-GTEGVAKAVCSGDSG 485
Query: 312 GPLTVIDEDGQITQVGVTSF 253
GPL V + G+ +G++S+
Sbjct: 486 GPL-VCERGGRWFLMGLSSW 504
>SB_52206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 786
Score = 44.8 bits (101), Expect = 7e-05
Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 1/140 (0%)
Frame = -1
Query: 669 KYINHPEYSENLNVVQPHDIGXIDFGRKIEFNDYIQPIRLQRSADKNRNYDNVRLVAXXX 490
+ I+H YS N +D + R + F Y+QP+ L D + + V
Sbjct: 622 RIISHANYSYN---TVDYDYALLKLTRPLNFTQYVQPVCLP---DSDFPAGTLCYVTGWG 675
Query: 489 XXXXXXXXSPENLNWVFLNGISNLRCMVAY-NFSPTIQPSTICTLGYNDTTQSTCQGDSG 313
SP L V L +++ +C Y S I P C G ++ C GDSG
Sbjct: 676 STNYRGSPSPNYLQEVGLPLVNHSQCHATYLTASRKITPRMRCA-GTEGVAKAVCSGDSG 734
Query: 312 GPLTVIDEDGQITQVGVTSF 253
GPL V + G+ +G++S+
Sbjct: 735 GPL-VCERGGRWFLMGLSSW 753
>SB_51536| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 347
Score = 44.8 bits (101), Expect = 7e-05
Identities = 33/131 (25%), Positives = 53/131 (40%)
Frame = -1
Query: 678 ETTKYINHPEYSENLNVVQPHDIGXIDFGRKIEFNDYIQPIRLQRSADKNRNYDNVRLVA 499
+ + I HP+Y+ + N +D+ I +++ND ++P+ L K +N +
Sbjct: 181 DVERIILHPKYAPHNN--HDYDVALIKLASPLQYNDRVRPVCLPSL--KEDLEENTQCYI 236
Query: 498 XXXXXXXXXXXSPENLNWVFLNGISNLRCMVAYNFSPTIQPSTICTLGYNDTTQSTCQGD 319
P L+ + +S C AYN S + GY CQGD
Sbjct: 237 SGWGHLQEAGHGPWVLHQAAVPLVSRDTCQKAYNDLHYKVSSRMRCAGYGAGGIDACQGD 296
Query: 318 SGGPLTVIDED 286
SGGPL + D
Sbjct: 297 SGGPLVCKEGD 307
>SB_46573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 335
Score = 44.8 bits (101), Expect = 7e-05
Identities = 33/98 (33%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = -1
Query: 462 PENLNWVFLNGISNLRCMVAYNFSPTIQPSTICTLGYNDTTQSTCQGDSGGPLTVIDEDG 283
P+ L + +S RC N++ I S +C G +CQGDSGGPL D +G
Sbjct: 171 PDRLMQASVPLVSKSRCDTG-NYTGKIHESMLCA-GLEQGGVDSCQGDSGGPLVCEDTNG 228
Query: 282 QITQVGVTSFVSSEGCHVDIPSGFIRPGHYL-DWFKTV 172
+ GVTS+ GC G YL DW V
Sbjct: 229 RWHLEGVTSW--GYGCAAPRMYGVYASVRYLRDWINGV 264
>SB_25649| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 718
Score = 44.4 bits (100), Expect = 9e-05
Identities = 34/122 (27%), Positives = 51/122 (41%)
Frame = -1
Query: 618 HDIGXIDFGRKIEFNDYIQPIRLQRSADKNRNYDNVRLVAXXXXXXXXXXXSPENLNWVF 439
+DI + + I+F+D IQPI L + + L SP L +
Sbjct: 79 YDIALLHLAKPIQFSDRIQPICLPQDDTEFPAGKMCYLTGWGETVLDSGVFSP-TLKQLK 137
Query: 438 LNGISNLRCMVAYNFSPTIQPSTICTLGYNDTTQSTCQGDSGGPLTVIDEDGQITQVGVT 259
+ ++ C ++S I +C GYN Q C GDSGGPL+ E G G+
Sbjct: 138 VPLVNKSVCNSNNSYSGIIHEQFMCA-GYNQGGQDGCLGDSGGPLSCQTESGDWVLTGLM 196
Query: 258 SF 253
S+
Sbjct: 197 SW 198
>SB_35182| Best HMM Match : CUB (HMM E-Value=0)
Length = 963
Score = 43.6 bits (98), Expect = 2e-04
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Frame = -1
Query: 429 ISNLRCMVAYNFSPTIQPSTICTLGYNDTTQSTCQGDSGGPLTVIDEDG--QITQVGVTS 256
+S +C ++ I + +C G +CQGDSGGP + + Q T VGVTS
Sbjct: 374 VSRDQCSHQQSYGDRITENMLCA-GMRQGGVDSCQGDSGGPFVCTNPENPRQWTLVGVTS 432
Query: 255 FVSSEGCHVDIPSG-FIRPGHYLDWFKTVTG 166
+ +GC + G + YL W +TG
Sbjct: 433 W--GKGCARALKYGIYANVRRYLHWINLITG 461
>SB_12588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/59 (38%), Positives = 32/59 (54%)
Frame = -1
Query: 336 STCQGDSGGPLTVIDEDGQITQVGVTSFVSSEGCHVDIPSGFIRPGHYLDWFKTVTGLD 160
S C GDSGGPL V +E G+ GV S+V++ C V+ S + R +DW + D
Sbjct: 118 SACNGDSGGPL-VCEEGGKWVLRGVASWVATSQCPVNNYSVYARVSSDVDWIQDKIAAD 175
>SB_45862| Best HMM Match : GMP_synt_C (HMM E-Value=0)
Length = 687
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/73 (35%), Positives = 38/73 (52%)
Frame = -1
Query: 390 PTIQPSTICTLGYNDTTQSTCQGDSGGPLTVIDEDGQITQVGVTSFVSSEGCHVDIPSGF 211
P S +C G + CQGDSGGPL V +E G+ G+ S+ S E C + + F
Sbjct: 569 PVDDASMVCAGGPG---RGGCQGDSGGPL-VCNEAGRWVLRGIVSWGSRE-CSTEFYTVF 623
Query: 210 IRPGHYLDWFKTV 172
R +Y+ W +T+
Sbjct: 624 TRVINYMPWIETI 636
>SB_22567| Best HMM Match : Trypsin (HMM E-Value=6.6e-30)
Length = 249
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/73 (35%), Positives = 38/73 (52%)
Frame = -1
Query: 390 PTIQPSTICTLGYNDTTQSTCQGDSGGPLTVIDEDGQITQVGVTSFVSSEGCHVDIPSGF 211
P S +C G + CQGDSGGPL V +E G+ G+ S+ S E C + + F
Sbjct: 109 PVDDASMVCAGGPG---RGGCQGDSGGPL-VCNEAGRWVLRGIVSWGSRE-CSTEFYTVF 163
Query: 210 IRPGHYLDWFKTV 172
R +Y+ W +T+
Sbjct: 164 TRVINYMPWIETI 176
>SB_31846| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 454
Score = 41.9 bits (94), Expect = 5e-04
Identities = 24/51 (47%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = -1
Query: 333 TCQGDSGGPLTVIDEDGQITQVGVTSFVSSEGC-HVDIPSGFIRPGHYLDW 184
TCQGDSGGPL V + + + T VGVTS+ GC H D P + + DW
Sbjct: 398 TCQGDSGGPL-VCENNNKWTLVGVTSW--GYGCAHPDYPGIYAKLTELKDW 445
>SB_42238| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 657
Score = 41.5 bits (93), Expect = 6e-04
Identities = 25/73 (34%), Positives = 37/73 (50%)
Frame = -1
Query: 453 LNWVFLNGISNLRCMVAYNFSPTIQPSTICTLGYNDTTQSTCQGDSGGPLTVIDEDGQIT 274
LN + ++ +S C +++ TI C G+ + +C GDSGGPL + DGQ
Sbjct: 136 LNELEVDIVSKEVCNANDSYNGTINDRYFCA-GFPQGGRDSCGGDSGGPLVCSNADGQYV 194
Query: 273 QVGVTSFVSSEGC 235
GV S+ EGC
Sbjct: 195 LRGVVSW--GEGC 205
>SB_10327| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 865
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/67 (34%), Positives = 36/67 (53%)
Frame = -1
Query: 375 STICTLGYNDTTQSTCQGDSGGPLTVIDEDGQITQVGVTSFVSSEGCHVDIPSGFIRPGH 196
S IC G S C GDSGGPL ++ + + + GV S+V++E C + S + R
Sbjct: 457 SMICAGGAGS---SACNGDSGGPLQCLENERWVLR-GVASWVTAETCPGNTFSVYARVSS 512
Query: 195 YLDWFKT 175
Y +W ++
Sbjct: 513 YSNWIES 519
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 38.7 bits (86), Expect = 0.004
Identities = 42/172 (24%), Positives = 66/172 (38%), Gaps = 4/172 (2%)
Frame = -1
Query: 672 TKYINHPEYSENLNVVQPHDIGXIDFGRKIEFNDY--IQPIRL--QRSADKNRNYDNVRL 505
++ I HP+Y++ V +DI ++ ++F+ + + L QR A R Y
Sbjct: 509 SQIIEHPKYNDRRIV---NDIALLELATPVQFDSAGKVGTVCLTDQRPAPGKRCY----- 560
Query: 504 VAXXXXXXXXXXXSPENLNWVFLNGISNLRCMVAYNFSPTIQPSTICTLGYNDTTQSTCQ 325
+ SP+ L L S+ C Y + +C C
Sbjct: 561 ITGWGAINGDTQQSPDILQQAMLPIASHENCRRKYG--DVSSTAHLCAGEARSDAAGGCN 618
Query: 324 GDSGGPLTVIDEDGQITQVGVTSFVSSEGCHVDIPSGFIRPGHYLDWFKTVT 169
GDSGGPL V +++G G S+ C + F R Y DW K +T
Sbjct: 619 GDSGGPL-VCEDNGSWFLHGAVSY-GLRNCPTTHYTVFARVASYTDWIKRMT 668
Score = 35.9 bits (79), Expect = 0.030
Identities = 20/54 (37%), Positives = 26/54 (48%)
Frame = -1
Query: 330 CQGDSGGPLTVIDEDGQITQVGVTSFVSSEGCHVDIPSGFIRPGHYLDWFKTVT 169
C GDSGGPL V +++G G S+ C + F R Y DW K +T
Sbjct: 283 CNGDSGGPL-VCEDNGSWFLHGAVSY-GLRNCPTTHYTVFARVASYTDWIKRMT 334
>SB_56478| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 968
Score = 38.3 bits (85), Expect = 0.006
Identities = 23/71 (32%), Positives = 31/71 (43%)
Frame = -1
Query: 396 FSPTIQPSTICTLGYNDTTQSTCQGDSGGPLTVIDEDGQITQVGVTSFVSSEGCHVDIPS 217
F I S +C G + S C GDSGGP I DG+ G S+ S + +
Sbjct: 222 FGIQITDSMVCA-GVPGSVVSGCHGDSGGPYVCIQPDGRYVLQGDVSWGSGRCDSSQMFT 280
Query: 216 GFIRPGHYLDW 184
F R H+ +W
Sbjct: 281 VFGRVAHFRNW 291
Score = 36.3 bits (80), Expect = 0.023
Identities = 25/70 (35%), Positives = 34/70 (48%)
Frame = -1
Query: 462 PENLNWVFLNGISNLRCMVAYNFSPTIQPSTICTLGYNDTTQSTCQGDSGGPLTVIDEDG 283
P+ L + +S RC AY I S +C G + TCQGDSGGP+ V + G
Sbjct: 840 PDILQQASVPVVSRARCEKAY--PGKIHDSMLCA-GLDQGGIDTCQGDSGGPM-VCESRG 895
Query: 282 QITQVGVTSF 253
+ G TS+
Sbjct: 896 RFYIHGATSW 905
>SB_1442| Best HMM Match : SRCR (HMM E-Value=0)
Length = 2103
Score = 37.9 bits (84), Expect = 0.008
Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = -1
Query: 357 GYNDTTQSTCQGDSGGPLTVIDEDGQITQVGVTSFVSSEGCHVDIPSG-FIRPGHYLDWF 181
G T + TC+GDSGGPL V + G+ +GVTS+ S GC +G + ++ DW
Sbjct: 1961 GIYGTPKGTCKGDSGGPL-VCESKGRWVLMGVTSW-SYNGCADSGYAGVYADVVYFKDWI 2018
Query: 180 K 178
+
Sbjct: 2019 R 2019
>SB_2871| Best HMM Match : TSP_C (HMM E-Value=8e-11)
Length = 326
Score = 37.1 bits (82), Expect = 0.013
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = -1
Query: 357 GYNDTTQSTCQGDSGGPLTVIDEDGQITQVGVTSFVSSEGCHVDIPSGFIRPGHYLDW 184
G ++ S+C GDSGGP + DG+ G S+ S + + + F R H+ +W
Sbjct: 5 GVENSILSSCHGDSGGPYVCVQPDGRYVLQGDVSWGSGKCDAKQMFTVFGRVAHFRNW 62
>SB_10167| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 532
Score = 36.3 bits (80), Expect = 0.023
Identities = 24/69 (34%), Positives = 31/69 (44%)
Frame = -1
Query: 390 PTIQPSTICTLGYNDTTQSTCQGDSGGPLTVIDEDGQITQVGVTSFVSSEGCHVDIPSGF 211
P + S IC G CQGDSGGP V +E G+ G S+ C D + F
Sbjct: 237 PVEEKSMICAGGMG---MGGCQGDSGGPF-VCNEGGRWVLRGAVSW-GQPMCGTDHYTVF 291
Query: 210 IRPGHYLDW 184
R ++DW
Sbjct: 292 ARVSSFIDW 300
>SB_43527| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 366
Score = 35.9 bits (79), Expect = 0.030
Identities = 32/130 (24%), Positives = 51/130 (39%), Gaps = 2/130 (1%)
Frame = -1
Query: 681 FETTKYINHPEYSENLNVVQPHDIGXIDFGRKIEFNDYIQPIRLQRSA-DKNRNYDNVR- 508
++ Y HP YS + DI I + + F DY++PI L +A D + NV
Sbjct: 191 YDAEMYKIHPHYSPDS---YDSDIALIRLAQPVTFTDYVKPICLPSAASDYAQLQANVSG 247
Query: 507 LVAXXXXXXXXXXXSPENLNWVFLNGISNLRCMVAYNFSPTIQPSTICTLGYNDTTQSTC 328
++ L+ + + C A+ + + C N + C
Sbjct: 248 TISGWGKRKLWRDRVANRLHEATVPIVDIQTCRKAHP-DYIVTANMFCAGFENSSRGDAC 306
Query: 327 QGDSGGPLTV 298
QGDSGGP +V
Sbjct: 307 QGDSGGPFSV 316
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 35.9 bits (79), Expect = 0.030
Identities = 43/173 (24%), Positives = 64/173 (36%), Gaps = 2/173 (1%)
Frame = -1
Query: 678 ETTKYINHPEYSENLNVVQPHDIGXIDFGRKIEFNDYIQPIRLQRSADKNRNYD-NVRLV 502
+ +K ++H Y+ L HDI I + + + L + K D N +
Sbjct: 20 KVSKIVSHTSYNSPLQY--SHDIALIKLATPAIMGNGVGTVCLPDTIQKLPLDDLNQKCW 77
Query: 501 AXXXXXXXXXXXSPENLNWVFLNGISNLRCMVAYNFSPTIQPSTICTLGYNDTTQSTCQG 322
P L + +S +C AY I S +C G + CQG
Sbjct: 78 ITGWGTLASGGNQPNKLMQASVPLVSQSKCNTAY--PNKIHDSMLCA-GLDAGGIDACQG 134
Query: 321 DSGGPLTVIDEDGQITQVGVTSFVSSEGCHVDIPSGFIRPGHYLD-WFKTVTG 166
DSGGPL V + +G+ G TS+ GC G YL W + + G
Sbjct: 135 DSGGPL-VCEYNGRWHIEGATSW--GYGCASPNQYGVYAHVRYLKAWVQGIMG 184
>SB_36638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 604
Score = 35.9 bits (79), Expect = 0.030
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = -1
Query: 387 TIQPSTICTLGYNDTTQSTCQGDSGGPLTVIDEDGQITQV-GVTSFVSSEGCHVDIPSG- 214
++ P+ C G + CQGDSGG + D Q + GV S+ SS GC + G
Sbjct: 286 SVTPNMFCA-GQASGGKDICQGDSGGGFVLYDSAKQKWFLGGVVSWGSSLGCGLPNKYGV 344
Query: 213 FIRPGHYLDW 184
++R +L W
Sbjct: 345 YVRVTQFLGW 354
>SB_11021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 35.5 bits (78), Expect = 0.040
Identities = 20/54 (37%), Positives = 27/54 (50%)
Frame = -1
Query: 330 CQGDSGGPLTVIDEDGQITQVGVTSFVSSEGCHVDIPSGFIRPGHYLDWFKTVT 169
C GDSGGPL V +++G G S+ + C + F R Y DW K +T
Sbjct: 947 CNGDSGGPL-VCEDNGSWFLHGAVSY-GMKYCPTTHYTVFARVASYTDWIKRMT 998
Score = 33.1 bits (72), Expect = 0.21
Identities = 18/49 (36%), Positives = 24/49 (48%)
Frame = -1
Query: 330 CQGDSGGPLTVIDEDGQITQVGVTSFVSSEGCHVDIPSGFIRPGHYLDW 184
C GDSGGPL V ++ G G S+ + C D + F R Y+ W
Sbjct: 674 CNGDSGGPL-VCEQSGVWVLHGAVSY-GARWCPTDYYTVFTRVSSYVAW 720
>SB_8561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 35.1 bits (77), Expect = 0.053
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
Frame = -1
Query: 417 RCMVAYNFSPTIQPSTICTLGYNDTTQSTCQGDSGGP-LTVIDEDGQITQVGVTSFVSSE 241
R +Y+F+ TI T C G TC+GDSGG + + +G+ V E
Sbjct: 204 RGSTSYHFNATI---TFCA-GEGKGGNDTCRGDSGGSFVREVRREGKYRWVSAGIVSWGE 259
Query: 240 GCHVDIPSGF-IRPGHYLDWFKT 175
GC + GF R YL W +
Sbjct: 260 GCGIKGKYGFYTRVESYLSWINS 282
>SB_4906| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 530
Score = 35.1 bits (77), Expect = 0.053
Identities = 43/173 (24%), Positives = 63/173 (36%), Gaps = 2/173 (1%)
Frame = -1
Query: 678 ETTKYINHPEYSENLNVVQPHDIGXIDFGRKIEFNDYIQPIRLQRSADKNRNYD-NVRLV 502
+ +K ++H Y+ L HDI I + + + L + K D N +
Sbjct: 364 KVSKIVSHTSYNSPLQY--SHDIALIKLATPAIMGNGVGTVCLPDTIQKLPLDDLNQKCW 421
Query: 501 AXXXXXXXXXXXSPENLNWVFLNGISNLRCMVAYNFSPTIQPSTICTLGYNDTTQSTCQG 322
P L + +S +C AY I S +C G + CQG
Sbjct: 422 ITGWGTLASGGNQPNKLMQASVPLVSQSKCNTAY--PNKIHDSMLCA-GLDAGGIDACQG 478
Query: 321 DSGGPLTVIDEDGQITQVGVTSFVSSEGCHVDIPSGFIRPGHYLD-WFKTVTG 166
DSGGPL V + G+ G TS+ GC G YL W + + G
Sbjct: 479 DSGGPL-VCEYKGRWHIEGATSW--GYGCASPNQYGVYAHVRYLKAWVQGIMG 528
>SB_21033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 246
Score = 33.9 bits (74), Expect = 0.12
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -1
Query: 429 ISNLRCMVAYNFS-PTIQPSTICTLGYNDTTQSTCQGDSGGPLTVIDEDGQITQVGVTSF 253
I N +C V + + S +C G S C GDSGGPL +E+G GV S+
Sbjct: 113 IENNKCKVKNDCHYKVLDKSMVCAGGAGS---SICHGDSGGPLQ-CEENGHWVLRGVASW 168
Query: 252 VSSEGCHVDIPSGFIR 205
V+ C + S + R
Sbjct: 169 VARMHCPGEYYSVYAR 184
>SB_1192| Best HMM Match : Trypsin (HMM E-Value=3.9e-23)
Length = 136
Score = 33.9 bits (74), Expect = 0.12
Identities = 31/96 (32%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Frame = -1
Query: 462 PENLNWVFLNGISNLRCMVAYNFSPTIQPSTICTLGYNDTTQSTCQGDSGGPLTVIDEDG 283
P+ L V + S RC +Y I S IC G + CQGDSGGP+ V + G
Sbjct: 41 PDYLQQVSVPIRSRARCDSSY--PNKIHDSMICA-GIDKGGIDACQGDSGGPM-VCENGG 96
Query: 282 QITQVGVTSFVSSEGCHVDIPSG-FIRPGHYLDWFK 178
+ G TS+ GC G + + + L W K
Sbjct: 97 RFYIHGATSW--GYGCAAPGLYGVYAKVKYLLPWIK 130
>SB_4778| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 867
Score = 33.9 bits (74), Expect = 0.12
Identities = 28/76 (36%), Positives = 33/76 (43%)
Frame = -1
Query: 462 PENLNWVFLNGISNLRCMVAYNFSPTIQPSTICTLGYNDTTQSTCQGDSGGPLTVIDEDG 283
PE LN + + C +Y I IC G + TCQGDSGGPL V
Sbjct: 771 PEALNQAVVPLRTRSECERSY--PGKISADMICA-GNPEGGVDTCQGDSGGPL-VCQHGN 826
Query: 282 QITQVGVTSFVSSEGC 235
Q GVTS+ GC
Sbjct: 827 QWFLTGVTSW--GHGC 840
>SB_28897| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 974
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 339 QSTCQGDSGGPLTVIDEDGQITQVGVTSFVSSEGC 235
+ C+GDSG P+ V DG + VG++S+ EGC
Sbjct: 910 RDACKGDSGSPIVVKRTDGSWSAVGLSSW--GEGC 942
>SB_26443| Best HMM Match : Trypsin (HMM E-Value=3e-22)
Length = 231
Score = 33.1 bits (72), Expect = 0.21
Identities = 26/71 (36%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = -1
Query: 414 CMVAYNFSPTIQP-STICTLGYNDTTQSTCQGDSGGPLTVIDEDGQITQVGVTSFVSSEG 238
CM N + P S IC G CQGDSGGP V +E G+ G S+ E
Sbjct: 121 CMQRNNQLMRVDPVSMICAGGQR--AAGGCQGDSGGPF-VCNEGGKWVLRGAVSW-GHEM 176
Query: 237 CHVDIPSGFIR 205
C D + F R
Sbjct: 177 CRTDYYTVFAR 187
>SB_10273| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 739
Score = 32.7 bits (71), Expect = 0.28
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = -1
Query: 462 PENLNWVFLNGISNLRCMVAYNFSPTIQPSTICTLGYNDTTQSTCQGDSGGPL 304
P+ L + + RCM AY I S +C G + CQGDSGGP+
Sbjct: 465 PDILQQATVPVVGRARCMKAYRGQ--IHESMLCA-GLDAGGVDACQGDSGGPM 514
>SB_27293| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 372
Score = 32.3 bits (70), Expect = 0.37
Identities = 27/76 (35%), Positives = 33/76 (43%), Gaps = 4/76 (5%)
Frame = -1
Query: 375 STICTLGYND--TTQSTCQGDSGGPLTVIDEDGQITQV--GVTSFVSSEGCHVDIPSGFI 208
S +C GYND T S C GDSGGPL D V GVTS+ S S F
Sbjct: 287 SMLCA-GYNDNKTQTSGCIGDSGGPLMCKAGDRWSKWVLHGVTSWGDSTCDGRAAYSVFT 345
Query: 207 RPGHYLDWFKTVTGLD 160
+ +++ W D
Sbjct: 346 KVSNFVQWIYRTMAAD 361
>SB_50961| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 1007
Score = 31.9 bits (69), Expect = 0.49
Identities = 32/123 (26%), Positives = 47/123 (38%), Gaps = 1/123 (0%)
Frame = -1
Query: 657 HPEYSENLNVVQPHDIGXIDFGRKIE-FNDYIQPIRLQRSADKNRNYDNVRLVAXXXXXX 481
HP+Y E + +D+ I I F +++P+ L SA + V
Sbjct: 521 HPDYHE---IKLTNDLALIRLRTPITTFTKHVRPVCLPTSATPDLAVGTNCTVTGYGRVG 577
Query: 480 XXXXXSPENLNWVFLNGISNLRCMVAYNFSPTIQPSTICTLGYNDTTQSTCQGDSGGPLT 301
S + L + +S C Y+ TI IC GY +C+GDSGGP
Sbjct: 578 ENEDLSTQ-LRHATIPVLSVSECRANYS-GHTINDKVICA-GYEGGKIDSCKGDSGGPFV 634
Query: 300 VID 292
D
Sbjct: 635 CKD 637
>SB_30267| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 282
Score = 31.9 bits (69), Expect = 0.49
Identities = 20/71 (28%), Positives = 28/71 (39%)
Frame = -1
Query: 384 IQPSTICTLGYNDTTQSTCQGDSGGPLTVIDEDGQITQVGVTSFVSSEGCHVDIPSGFIR 205
+ + +C T ++ C GDSGGP + GQ GV S+ E + S F R
Sbjct: 206 VTETMLCAGDAGKTGKNGCNGDSGGPFVCRNTAGQWVLQGVVSWGDPECSSANHFSVFAR 265
Query: 204 PGHYLDWFKTV 172
W V
Sbjct: 266 VSVLRHWIDKV 276
>SB_26911| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 349
Score = 31.9 bits (69), Expect = 0.49
Identities = 29/125 (23%), Positives = 48/125 (38%)
Frame = -1
Query: 678 ETTKYINHPEYSENLNVVQPHDIGXIDFGRKIEFNDYIQPIRLQRSADKNRNYDNVRLVA 499
+ +K I HP Y + + + HDI + + N+ + + L + + + +
Sbjct: 186 KVSKVILHPSYGKPVTLA--HDIALLKLEKSATVNNNVHTVCLPFNGPAPSDCTHCWITG 243
Query: 498 XXXXXXXXXXXSPENLNWVFLNGISNLRCMVAYNFSPTIQPSTICTLGYNDTTQSTCQGD 319
P+ L + +S RC AY I S +C G + CQ D
Sbjct: 244 WGHLASGGDT--PDLLQQASVPIVSRSRCDKAY--PGKIDSSMLCA-GLDKGGIDACQRD 298
Query: 318 SGGPL 304
SGGPL
Sbjct: 299 SGGPL 303
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 31.9 bits (69), Expect = 0.49
Identities = 21/68 (30%), Positives = 32/68 (47%)
Frame = -1
Query: 438 LNGISNLRCMVAYNFSPTIQPSTICTLGYNDTTQSTCQGDSGGPLTVIDEDGQITQVGVT 259
+N L C+ +F P G ++ +CQGDSGGP+ V + +G+ GV
Sbjct: 242 INKAVGLACLADPSF-PIDDGKKCWVTGLDEGGIDSCQGDSGGPM-VCENNGRFYLDGVV 299
Query: 258 SFVSSEGC 235
S+ GC
Sbjct: 300 SW--GHGC 305
>SB_24109| Best HMM Match : Trypsin (HMM E-Value=4.6e-06)
Length = 151
Score = 31.1 bits (67), Expect = 0.86
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -1
Query: 462 PENLNWVFLNGISNLRCMVAYNFSPTIQPSTICTLGYNDTTQSTCQGDSGGPL 304
PE L + + C + +++ TI +C G+ + CQ DSGGPL
Sbjct: 98 PEALREAKVRLVPTWVCNLVNSYNGTIHSRALCA-GFKEGGVDACQYDSGGPL 149
>SB_59706| Best HMM Match : Trypsin (HMM E-Value=0.16)
Length = 91
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = -1
Query: 429 ISNLRCMVAYNFSPTIQPSTICTLGYNDTTQSTCQGDSGGPLTVIDEDGQITQVGVTSF 253
+S C AY+ + S +C G +CQGDSGGP+ V + +G+ GV S+
Sbjct: 23 VSASTCSRAYS---RLHESMVCA-GRASGGIDSCQGDSGGPM-VCEYNGKFNLEGVVSW 76
>SB_28864| Best HMM Match : Trypsin (HMM E-Value=1.4e-40)
Length = 230
Score = 29.9 bits (64), Expect = 2.0
Identities = 31/144 (21%), Positives = 50/144 (34%), Gaps = 9/144 (6%)
Frame = -1
Query: 657 HPEYSENLNVVQPH---------DIGXIDFGRKIEFNDYIQPIRLQRSADKNRNYDNVRL 505
HP Y E V+ H D+ + +F +Y+ PI L + R
Sbjct: 56 HPRYQEATITVEGHRARHVPPDYDVALLRLATPAKFTNYVYPICLLPQGARFR--PGKYC 113
Query: 504 VAXXXXXXXXXXXSPENLNWVFLNGISNLRCMVAYNFSPTIQPSTICTLGYNDTTQSTCQ 325
P L + + +C +++ + +C G+ CQ
Sbjct: 114 YVTGWGVLQWKGTKPAILREAQVQLVPQDKCNSPQSYNGEVSGRALCA-GFERGGVDACQ 172
Query: 324 GDSGGPLTVIDEDGQITQVGVTSF 253
DSGGPL +E G+ GV S+
Sbjct: 173 YDSGGPL-ACEERGRWYLTGVVSY 195
>SB_53569| Best HMM Match : EGF_CA (HMM E-Value=0)
Length = 921
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 10/68 (14%)
Frame = -1
Query: 345 TTQSTCQGDSGGPLTVIDEDGQITQV------GVTSF---VSSEGCHVDIP-SGFIRPGH 196
T+ TC DSG PL Q V G+ S+ + GCH D S ++ G
Sbjct: 847 TSDVTCISDSGSPLMFPVPHAQNPNVKRWILGGILSWGLNTLTPGCHSDYSHSAYVDIGS 906
Query: 195 YLDWFKTV 172
YL W +++
Sbjct: 907 YLKWIRSI 914
>SB_28641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -2
Query: 149 HRAHQKHPRQRKRLVQQKHPTRQRRPTLR 63
HR H++H R+R+R ++ P R+RRP R
Sbjct: 7 HRHHRRHSRRRRRPRRRARP-RRRRPCRR 34
>SB_55505| Best HMM Match : Trypsin (HMM E-Value=0)
Length = 292
Score = 28.7 bits (61), Expect = 4.6
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
Frame = -1
Query: 414 CMVAYNFSPTIQPSTICTLGYNDTTQSTCQGDSGGPLTVIDEDGQITQVGVTSFVSSEGC 235
C A ++ I +C G + CQ DSGGPL E G G+ S+ GC
Sbjct: 197 CNSANSYGGVIHERALCA-GPREGGCGPCQFDSGGPL-ACSEGGLWYMYGIVSY--GVGC 252
Query: 234 HVDIPSGFIRPGHYL-DWFK 178
V G + L DW +
Sbjct: 253 GVANKFGVYSNMYELTDWVR 272
>SB_49208| Best HMM Match : G_glu_transpept (HMM E-Value=0)
Length = 596
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = +1
Query: 370 GGGLNGRTEVVGHHTTQIRYSVQEHPVQVLRR*AS---GPGTAPSAGDKSDIVV 522
G GRT + ++ ++V EHP + R AS PG PS+ ++V
Sbjct: 431 GSKFMGRTTGILYNNQMAAFAVAEHPNKTYEREASNFISPGKRPSSTSAPSVIV 484
>SB_21831| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -1
Query: 369 ICTLGYNDTTQSTCQGDSGGPLTVIDEDGQ 280
+C +++ S C GDSGGP + DG+
Sbjct: 459 LCAGNGGNSSISGCHGDSGGPFVCMGGDGR 488
>SB_59555| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 898
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -1
Query: 390 PTIQPSTICTLGYNDTTQSTCQGDSGGPLTVIDEDGQITQVGVTSFVSSEGCHV--DIPS 217
P S IC G + CQGDSGGP V +E G+ G + ++ + DI +
Sbjct: 195 PVDSRSMICAGGQG---KGGCQGDSGGPF-VCEEGGKWVLRGALVRIGTKDANTGKDIVA 250
Query: 216 GFI 208
G +
Sbjct: 251 GIV 253
>SB_48048| Best HMM Match : Trypsin (HMM E-Value=3.64338e-44)
Length = 348
Score = 27.9 bits (59), Expect = 8.0
Identities = 23/75 (30%), Positives = 30/75 (40%), Gaps = 2/75 (2%)
Frame = -1
Query: 402 YNFSPTIQPSTICTLGYNDTTQSTCQGDSGGP-LTVIDEDGQITQVGVTSFVSSEGCHVD 226
+NF+ T+ T C G TC GDSGG + +G+ V EGC
Sbjct: 267 HNFNATV---TFCA-GDGKGGNDTCHGDSGGSFVREFRREGKYRWVSAGIVSWGEGCGQK 322
Query: 225 IPSGF-IRPGHYLDW 184
GF R Y+ W
Sbjct: 323 DKYGFYTRVEPYVHW 337
>SB_25813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/40 (27%), Positives = 17/40 (42%)
Frame = -2
Query: 149 HRAHQKHPRQRKRLVQQKHPTRQRRPTLRTCFFNINIHKP 30
H QKHP K +KHP ++ P + + + P
Sbjct: 139 HPEAQKHPEAEKHPEAEKHPEAEKHPEAKEATLGLLLFGP 178
>SB_19093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 48
Score = 27.9 bits (59), Expect = 8.0
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -2
Query: 146 RAHQKHPRQRKRLVQQKHPTRQRRPTLRTC 57
R +QKH RQ Q+ P RR T TC
Sbjct: 2 RKYQKHKRQNSEFDQRHPPKAARRVTRWTC 31
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,273,261
Number of Sequences: 59808
Number of extensions: 485858
Number of successful extensions: 1435
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1428
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1757375282
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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