Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11g15r
         (681 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    36   4e-04
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    29   0.031
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    25   0.88 
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   2.0  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    23   3.6  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    23   3.6  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    23   3.6  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   6.2  
AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    22   6.2  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    21   8.2  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    21   8.2  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    21   8.2  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    21   8.2  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 35.9 bits (79), Expect = 4e-04
 Identities = 41/171 (23%), Positives = 67/171 (39%), Gaps = 4/171 (2%)
 Frame = -1

Query: 669 KYINHPEYSE-NLNVVQPHDIGXIDFGRKIEFNDYIQPIRL--QRSADKNRNYDNVRLVA 499
           K I HP+Y     +  Q +DI  +   + I+F D + P  L  Q   D     D   +  
Sbjct: 238 KVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKVGPACLPFQHFLDSFAGSD---VTV 294

Query: 498 XXXXXXXXXXXSPENLNWVFLNGISNLRCMVAYNFSPTIQPSTICTLGYNDTTQSTCQGD 319
                          L    LN ++ + C   Y +   I  + +C        +  CQ D
Sbjct: 295 LGWGHTSFNGMLSHILQKTTLNMLTQVEC---YKYYGNIMVNAMCAYAKG---KDACQMD 348

Query: 318 SGGP-LTVIDEDGQITQVGVTSFVSSEGCHVDIPSGFIRPGHYLDWFKTVT 169
           SGGP L       ++  +G+ S+ +  G +   P+G  + G Y+DW  + T
Sbjct: 349 SGGPVLWQNPRTKRLVNIGIISWGAECGKY---PNGNTKVGSYIDWIVSQT 396


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 29.5 bits (63), Expect = 0.031
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = -2

Query: 158 SIGHRAHQKHPRQRKRLVQQKHPTRQRR 75
           SI HR H K+ +QRK + Q +   R++R
Sbjct: 53  SIYHRQHSKNEQQRKEMEQMREREREQR 80


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = -1

Query: 441 FLNGISNLRCMVAYNFSPTIQPSTICTLGYNDTTQ 337
           FLNG+ NL   + +++     PS IC    N+T Q
Sbjct: 96  FLNGLDNLHEYLKFSYPRMRAPSFICE---NETRQ 127


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 303 TVIDEDGQITQVGVTSFVSSEGCHVDIPSGFIR 205
           T++ E    T  G + F++  GCH DI    I+
Sbjct: 344 TIMFEGHDTTASGSSFFLAVMGCHPDIQEKVIQ 376


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/49 (24%), Positives = 23/49 (46%)
 Frame = -2

Query: 149 HRAHQKHPRQRKRLVQQKHPTRQRRPTLRTCFFNINIHKPFDFLMNVNN 3
           +R +++  ++R R   +    R R P + +   N  IH   ++  N NN
Sbjct: 56  YRKYRETSKERSR--DRTERERSREPKIISSLSNKTIHNNNNYKYNYNN 102


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/49 (24%), Positives = 23/49 (46%)
 Frame = -2

Query: 149 HRAHQKHPRQRKRLVQQKHPTRQRRPTLRTCFFNINIHKPFDFLMNVNN 3
           +R +++  ++R R   +    R R P + +   N  IH   ++  N NN
Sbjct: 56  YRKYRETSKERSR--DRTERERSREPKIISSLSNKTIHNNNNYKYNYNN 102


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/49 (24%), Positives = 23/49 (46%)
 Frame = -2

Query: 149 HRAHQKHPRQRKRLVQQKHPTRQRRPTLRTCFFNINIHKPFDFLMNVNN 3
           +R +++  ++R R   +    R R P + +   N  IH   ++  N NN
Sbjct: 289 YRKYRETSKERSR--DRTERERSREPKIISSLSNKTIHNNNNYKYNYNN 335


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +1

Query: 325 LTSGLRSVVVAKRANGGGLNGRTEVVGH 408
           L +G  +VV+       G+ GRT  VG+
Sbjct: 131 LITGWSAVVITAAICTSGIVGRTHTVGY 158


>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/14 (64%), Positives = 11/14 (78%), Gaps = 1/14 (7%)
 Frame = +2

Query: 431 PFKNTQFKFS-GDE 469
           PFKNT+ KF  G+E
Sbjct: 57  PFKNTEIKFKLGEE 70


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 12/49 (24%), Positives = 23/49 (46%)
 Frame = -2

Query: 149 HRAHQKHPRQRKRLVQQKHPTRQRRPTLRTCFFNINIHKPFDFLMNVNN 3
           +R +++  ++R R   +    R R P + +   N  IH   ++  N NN
Sbjct: 56  YRKYRETWKERSR--DRTERERSREPKIISSLSNRTIHNNNNYKYNYNN 102


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 12/49 (24%), Positives = 23/49 (46%)
 Frame = -2

Query: 149 HRAHQKHPRQRKRLVQQKHPTRQRRPTLRTCFFNINIHKPFDFLMNVNN 3
           +R +++  ++R R   +    R R P + +   N  IH   ++  N NN
Sbjct: 56  YRKYRETWKERSR--DRTERERSREPKIISSLSNKTIHNNNNYKYNYNN 102


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 12/49 (24%), Positives = 23/49 (46%)
 Frame = -2

Query: 149 HRAHQKHPRQRKRLVQQKHPTRQRRPTLRTCFFNINIHKPFDFLMNVNN 3
           +R +++  ++R R   +    R R P + +   N  IH   ++  N NN
Sbjct: 56  YRKYRETWKERSR--DRTERERSREPKIISSLSNKTIHNNNNYKYNYNN 102


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 12/49 (24%), Positives = 23/49 (46%)
 Frame = -2

Query: 149 HRAHQKHPRQRKRLVQQKHPTRQRRPTLRTCFFNINIHKPFDFLMNVNN 3
           +R +++  ++R R   +    R R P + +   N  IH   ++  N NN
Sbjct: 56  YRKYRETWKERSR--DRTERERSREPKIISSLSNKTIHNNNNYKYNYNN 102


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,983
Number of Sequences: 438
Number of extensions: 4496
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20708550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)