Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11g11r
(724 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55341| Best HMM Match : Mt_ATP-synt_B (HMM E-Value=0.0013) 51 8e-07
SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.025
SB_36007| Best HMM Match : Collagen (HMM E-Value=9e-25) 34 0.13
SB_36009| Best HMM Match : Collagen (HMM E-Value=0) 33 0.23
SB_40843| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.54
SB_10360| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.54
SB_39378| Best HMM Match : VWA (HMM E-Value=0) 32 0.54
SB_25198| Best HMM Match : Tropomyosin (HMM E-Value=1.5e-08) 31 0.72
SB_24914| Best HMM Match : Nuc_sug_transp (HMM E-Value=3.6e-15) 31 0.95
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 31 1.2
SB_25350| Best HMM Match : Collagen (HMM E-Value=0) 31 1.2
SB_6496| Best HMM Match : Collagen (HMM E-Value=0) 30 1.7
SB_29801| Best HMM Match : Collagen (HMM E-Value=3.2e-12) 30 1.7
SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_25813| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_59727| Best HMM Match : C2 (HMM E-Value=0.0018) 30 2.2
SB_42699| Best HMM Match : SIR2 (HMM E-Value=1.6e-12) 29 2.9
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_24442| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_10888| Best HMM Match : Collagen (HMM E-Value=7.5) 29 2.9
SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_31305| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40) 29 5.0
SB_16761| Best HMM Match : PDZ (HMM E-Value=1.6e-08) 29 5.0
SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_31228| Best HMM Match : EMP24_GP25L (HMM E-Value=0.22) 29 5.0
SB_38454| Best HMM Match : DCX (HMM E-Value=4.2) 28 6.7
SB_26664| Best HMM Match : I-set (HMM E-Value=7.6e-06) 28 6.7
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 28 6.7
SB_47930| Best HMM Match : Vicilin_N (HMM E-Value=1.3) 28 6.7
SB_40213| Best HMM Match : Pkinase_Tyr (HMM E-Value=1.1e-07) 28 6.7
SB_29523| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_22053| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_30893| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_26644| Best HMM Match : Collagen (HMM E-Value=0) 28 8.8
SB_50891| Best HMM Match : CsbD (HMM E-Value=3.4) 28 8.8
SB_44710| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_34766| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_33497| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_11762| Best HMM Match : 4HBT (HMM E-Value=1.6e-19) 28 8.8
SB_10797| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
>SB_55341| Best HMM Match : Mt_ATP-synt_B (HMM E-Value=0.0013)
Length = 185
Score = 51.2 bits (117), Expect = 8e-07
Identities = 30/83 (36%), Positives = 41/83 (49%)
Frame = -1
Query: 556 GVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMVYVAHVKFGPKLAAWLDKEVEAT 377
G G F GLA YL S EI ++ E Y + Y K G +A LD +
Sbjct: 69 GSLGQLMFFGGLAAYLLSNEILIIHEETYIAAVMGGTFYWLMKKAGGPIAEMLDNTSQEI 128
Query: 376 ENEWNEGRNQTVKALEDAIEGEK 308
+ +N GRN ++K L+DAI+ EK
Sbjct: 129 LDAFNVGRNASIKHLQDAIDNEK 151
>SB_55337| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1853
Score = 36.3 bits (80), Expect = 0.025
Identities = 27/96 (28%), Positives = 38/96 (39%)
Frame = -3
Query: 311 EDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPE 132
EDGA+ G P G+ G+ PA R L G+ + G P + E G
Sbjct: 689 EDGAIGSRGLPGPS-GEPGKPGPAGRAGLAGQ--------DGLPGTPGTKGEPGPTGEKG 739
Query: 131 AHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQE 24
R+ E+ +G G G GP L G G++
Sbjct: 740 EVFRIKGEKGAKGQQGGIGNPGPPGLRGDVGPPGEQ 775
Score = 36.3 bits (80), Expect = 0.025
Identities = 25/76 (32%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Frame = -3
Query: 269 PGQEGERAPAARGRLQG----EAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQR 102
PG G R PA R + G + L + +G+P + G P P A G L E
Sbjct: 1108 PGPAGPRGPAGRNGIDGLPGTKGEPGSLGEKGDAGIPGQRGLTGNPGLPGAQG-LKGEPG 1166
Query: 101 DQGDHSGPGEAG-PGP 57
G + PG G PGP
Sbjct: 1167 RDGQNGSPGRKGEPGP 1182
Score = 31.9 bits (69), Expect = 0.54
Identities = 27/100 (27%), Positives = 39/100 (39%), Gaps = 4/100 (4%)
Frame = -3
Query: 317 GREDGAVARAGTGAPH-PGQEGERAPAARGRLQGEAHVRLLRGEAAS-GLPAREVERGA- 147
GR A + TG P PG +GE+ A + G R +G+ GL G
Sbjct: 1319 GRAGQAGPKGETGLPGMPGLDGEKGSAGVPGIPGGPGGRGFKGDQGPPGLNGNPGAPGVD 1378
Query: 146 -PSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAG 30
P+ P+ + +G+ PG GP PG +G
Sbjct: 1379 GPTGPKGESGIAGLDGPKGEPGLPGRDGPAGEKGSPGLSG 1418
Score = 29.5 bits (63), Expect = 2.9
Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Frame = -3
Query: 332 GGRNRGREDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLLRG-EAASGLPAREVE 156
GGR + G G PG +G P +GE+ + L G + GLP R+
Sbjct: 1355 GGRGFKGDQGPPGLNGNPGA-PGVDGPTGP------KGESGIAGLDGPKGEPGLPGRDGP 1407
Query: 155 RGAPSRPEAHGRLDSEQRDQGDHSGPGEAGP 63
G P G + D+GD PG +GP
Sbjct: 1408 AGEKGSPGLSGL----RGDKGDRGLPGPSGP 1434
Score = 27.9 bits (59), Expect = 8.8
Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 5/82 (6%)
Frame = -3
Query: 332 GGRNRGREDGAVARAGTGAP----HPGQEGERAPAARGRLQGEAHVRLLRGEAAS-GLPA 168
G G + + GAP PG++GE+ R L G + +GE G
Sbjct: 346 GSGGSGCNGTTIFKGPPGAPGEKGEPGKQGEKGEEGRPGLPGAQGIEGPKGERGEPGNQG 405
Query: 167 REVERGAPSRPEAHGRLDSEQR 102
+ +RG P G L S+ R
Sbjct: 406 LKGDRGVDGNPGPIGPLVSKDR 427
>SB_36007| Best HMM Match : Collagen (HMM E-Value=9e-25)
Length = 311
Score = 33.9 bits (74), Expect = 0.13
Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 7/111 (6%)
Frame = -3
Query: 350 PNRESTGGRNRGREDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLLRG-EAASGL 174
P R+ G+ RG E + G+G G +G P QG R G + SG
Sbjct: 87 PGRQGLQGK-RGPEGDPGSPGGSG--EAGDKGVDGPPGSPGPQGFNGARGPNGPKGDSGR 143
Query: 173 PAREVERGAPSRPEAHGRLDSEQ------RDQGDHSGPGEAGPGPLHRGPG 39
P ++ +G P P A G + G + GP GPGP GPG
Sbjct: 144 PGQDGRQGPPGPPGARGEPGQQAPMMIQVSRPGPNKGPPGPGPGP---GPG 191
>SB_36009| Best HMM Match : Collagen (HMM E-Value=0)
Length = 687
Score = 33.1 bits (72), Expect = 0.23
Identities = 28/90 (31%), Positives = 34/90 (37%), Gaps = 4/90 (4%)
Frame = -3
Query: 281 GAP-HPGQEGERAPAARGRLQGEAHVRLLRGE-AASGLPAREVERGAPSRPEAHGRLDSE 108
GAP PG G++ G LRG A G E GAP R A G
Sbjct: 379 GAPGSPGLGGQKGDQGMPGKPGNPGAAGLRGAPGARGDYGERGEPGAPGRDGAPGAQGER 438
Query: 107 --QRDQGDHSGPGEAGPGPLHRGPGFAGQE 24
+ +QG G AG G PG G++
Sbjct: 439 GPRGEQGKQGEKGHAGEGGADGAPGIPGEQ 468
Score = 31.9 bits (69), Expect = 0.54
Identities = 26/84 (30%), Positives = 32/84 (38%), Gaps = 1/84 (1%)
Frame = -3
Query: 311 EDGAVARAGTGAPHPGQEGERAPAARGRLQGE-AHVRLLRGEAASGLPAREVERGAPSRP 135
E GA R G PG +GER P QGE H + A G+P + G P
Sbjct: 422 EPGAPGRDGA----PGAQGERGPRGEQGKQGEKGHAGEGGADGAPGIPGEQGPMGPVGAP 477
Query: 134 EAHGRLDSEQRDQGDHSGPGEAGP 63
G + G PG +GP
Sbjct: 478 GPVG-------NAGSPGSPGPSGP 494
Score = 29.1 bits (62), Expect = 3.8
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Frame = -3
Query: 203 LLRGEAASGLPAREVERGAPSR---PEAHGR-----LDSEQRDQGDHSGPGEAGPGPLHR 48
++R GLP + +RG P P G + D GD PGEAGP +
Sbjct: 113 VIRRVGIPGLPGKRGDRGTPGAKGPPGLAGEPGEPGTQGPRGDPGDVGEPGEAGPSGRNG 172
Query: 47 GPGFAG 30
G AG
Sbjct: 173 ANGTAG 178
>SB_40843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 333
Score = 33.1 bits (72), Expect = 0.23
Identities = 18/47 (38%), Positives = 24/47 (51%)
Frame = +2
Query: 476 FVLHYIDFLAAQVCCQTHTKSVRTRHTSFRVEELEPFFRNKAKSNFA 616
+VL+ IDF A C HT + H +F+VE F R KS F+
Sbjct: 21 YVLNSIDFEA----CDKHTIGIAYAHAAFKVEAATKFTREPLKSGFS 63
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 31.9 bits (69), Expect = 0.54
Identities = 31/117 (26%), Positives = 46/117 (39%), Gaps = 9/117 (7%)
Frame = -3
Query: 347 NRESTGGRNRGREDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLLRGE------- 189
N + G + G + + G + G+ P G L G+A +R L+G
Sbjct: 3714 NTGAPGSQGSTGPRGPIGQPGMAGSQGEKGGKGDPGFPG-LPGQAGLRGLQGPEGQKGSI 3772
Query: 188 AASGLPAREVERGAPSRPEA-HGRLDSEQRDQGDHSGPGEAG-PGPLHRGPGFAGQE 24
A G+P + E+G P RP G R + PG G PG + PG G +
Sbjct: 3773 GAPGIPGKIGEKGVPGRPSTIAGPPGPPGRSKNISGPPGPQGPPGQASQIPGPPGPQ 3829
>SB_10360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 547
Score = 31.9 bits (69), Expect = 0.54
Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 5/106 (4%)
Frame = -3
Query: 344 RESTGGRN-RGRED--GAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLLRGEAASGL 174
R +TG R GR G ++G PG+ G P A+G + + L + A G
Sbjct: 216 RGATGPRGYTGRTGLRGVPGKSGRNGT-PGKNGR--PGAKGAMGPRGYRGLTGSKGARGA 272
Query: 173 PAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLH--RGP 42
++ RGA RP +G + +G G GP L RGP
Sbjct: 273 RGKQGLRGATGRPGRNG-VPGRPGSKGKTGARGATGPRGLRGLRGP 317
>SB_39378| Best HMM Match : VWA (HMM E-Value=0)
Length = 2865
Score = 31.9 bits (69), Expect = 0.54
Identities = 37/167 (22%), Positives = 71/167 (42%), Gaps = 2/167 (1%)
Frame = -1
Query: 601 GFIPEEWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMVYVAHVKF 422
GF+ E++F SK+ +G+A+Y S I+ + Y +G + +
Sbjct: 2183 GFLREKYFVIGISKSFEISANKTRIGVASYSSSANIHFNFNTYNTGYDVENAINAISFSG 2242
Query: 421 GPK--LAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENV 248
G K LA LD E N + + + + AL +G T++ Q L+ +K
Sbjct: 2243 GAKRNLARGLDATFEGLFN-FTDIQPSDINALIVLTDGRATDEIDMAAQRLV--NEKNVT 2299
Query: 247 LLQLEAAYRERLMYAYSEVKRRLDYQLEKSNVERRLAQKHMVDWIVS 107
++ + A RL +E++R E + RR+ Q ++ +++
Sbjct: 2300 IIAVGAGSHVRL----AELRRLAGLASESPLITRRVIQADSMEELIN 2342
>SB_25198| Best HMM Match : Tropomyosin (HMM E-Value=1.5e-08)
Length = 277
Score = 31.5 bits (68), Expect = 0.72
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Frame = -1
Query: 400 LDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYR 221
L K +E T+ E +E + ALE+AIE +K+ + EL I+ + + +E R
Sbjct: 90 LCKTLEVTDRESDEKMRELEDALEEAIELDKSTADKLAEVELKIKVVQGELEKAVERGDR 149
Query: 220 ERLMYAY--------SEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQ 68
+M + SEV R L+ + + + ER + + +++I N+ + + +E +
Sbjct: 150 AEMMCEHLMNDFTGTSEVLRDLEVK-DAAASEREIDNEDKIEFIQENLKQMVYRYEEAE 207
>SB_24914| Best HMM Match : Nuc_sug_transp (HMM E-Value=3.6e-15)
Length = 979
Score = 31.1 bits (67), Expect = 0.95
Identities = 33/108 (30%), Positives = 43/108 (39%), Gaps = 4/108 (3%)
Frame = -3
Query: 332 GGRNRGREDGAVARAGT-GAPHPGQEGERAPAARGRLQ-GEAHVRLLRGEAASGLPAREV 159
G + E G + AG G G E +A A ++ GEA GEA A E
Sbjct: 631 GETSEAGEAGEASEAGVAGEAVEGSEASKAGEAGEAVEAGEASEA---GEAIEAGEAGEA 687
Query: 158 ERGAPSRPEAHGRLD--SEQRDQGDHSGPGEAGPGPLHRGPGFAGQEV 21
+ + EA G SE + G+ S GEAG G AG+ V
Sbjct: 688 SEASEAAGEATGEAGEASEASEAGEASEAGEAGEAGEASEAGVAGEAV 735
Score = 30.7 bits (66), Expect = 1.2
Identities = 28/91 (30%), Positives = 35/91 (38%), Gaps = 3/91 (3%)
Frame = -3
Query: 332 GGRNRGREDGAVARAGT--GAPHPGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREV 159
G E G + AG GA + GE + A GEA GEA A E
Sbjct: 846 GEAGEAGEAGEASEAGEAGGASEASEAGEASEAGEASKAGEASKASEAGEAGEASEAGEA 905
Query: 158 ERGAPSRPEAHGRLDS-EQRDQGDHSGPGEA 69
A EA G ++ E + G+ S GEA
Sbjct: 906 SE-AGEASEAGGASEAGEASEAGEASEAGEA 935
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = -3
Query: 179 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVN 18
G P ++ G P P A G + G PGEAGP GPG+ G N
Sbjct: 456 GPPGPQMPPGPPGLPGAPGP-NGPPGINGPLGPPGEAGPPGNPGGPGYQGNHGN 508
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/54 (35%), Positives = 23/54 (42%)
Frame = -3
Query: 179 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVN 18
G P ++ G P P A G + G PGEAGP GPG+ G N
Sbjct: 541 GPPGPQMPPGPPGLPGAPGP-NGPPGINGPLGPPGEAGPPGNPGGPGYQGNHGN 593
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/54 (31%), Positives = 21/54 (38%)
Frame = -3
Query: 179 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVN 18
G P ++ G P P A G G PG+ GP GPG+ G N
Sbjct: 286 GPPGPQMPPGPPGLPGAPGP-KGPPGTNGPLGPPGDVGPPGNPGGPGYQGNHGN 338
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/54 (31%), Positives = 21/54 (38%)
Frame = -3
Query: 179 GLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQEVN 18
G P ++ G P P A G G PG+ GP GPG+ G N
Sbjct: 371 GPPGPQMPPGPPGLPGAPGP-KGPPGTNGPLGPPGDVGPPGNPGGPGYQGNHGN 423
>SB_25350| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1112
Score = 30.7 bits (66), Expect = 1.2
Identities = 30/88 (34%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Frame = -3
Query: 281 GAP-HPGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQ 105
GAP PG EG+ + +G L+G G P E RG P P G+ +
Sbjct: 141 GAPGSPGAEGKVGLTGQTGPRGPTGPPGLQG--VRGAPGNEGARGLPGNPGLKGKRGA-- 196
Query: 104 RDQGDHSGPGEAGP-GPLHRGP-GFAGQ 27
G PG GP GP GP G GQ
Sbjct: 197 --TGSRGSPGNQGPQGP--SGPQGSKGQ 220
>SB_6496| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1234
Score = 30.3 bits (65), Expect = 1.7
Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Frame = -3
Query: 266 GQEGERAPAARGRLQGEAHVRLLRGEAAS-GLPAREVERGAPSRPEAHGRLDSEQRDQGD 90
G++GE P G VR +GE+ S GLP +G G + + ++G
Sbjct: 92 GKDGEEGPPGPNGAPGRPGVRGPKGESGSRGLPGNHGVQGERGSQGGRG-IKGGRGNEGS 150
Query: 89 HSGPGEAG--PGPLHRGP 42
PG AG G RGP
Sbjct: 151 AGIPGRAGNKGGRGDRGP 168
>SB_29801| Best HMM Match : Collagen (HMM E-Value=3.2e-12)
Length = 182
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = -3
Query: 197 RGEAAS-GLPAREVERGAPSRPEAHGR--LDSEQRDQGDHSGPGEAGPGPLHRGPG 39
+GE + G R RG P +P A G+ + +GD G+AGP L PG
Sbjct: 34 KGEKGNRGRRGRRGPRGPPGKPGADGKPGIRGPPGPKGDKGEKGDAGPRGLKGDPG 89
>SB_13021| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 30.3 bits (65), Expect = 1.7
Identities = 28/103 (27%), Positives = 33/103 (32%)
Frame = -3
Query: 332 GGRNRGREDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVER 153
GG+ G+ + G G P PG P G QG G+ P +
Sbjct: 486 GGQGWGQPPPGAGQGG-GPPPPGAGQGGGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQG 544
Query: 152 GAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQE 24
G P P A G GP G G P AGQE
Sbjct: 545 GGPPPPGAGQGWGQPPPGAGQGGGPPPPGAGQGGPPPPGAGQE 587
>SB_25813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = -3
Query: 272 HPGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQG 93
HP E E+ P A + + E H + A P E + A +PEA + ++E++ +
Sbjct: 49 HP--EAEKQPEAEKQPEAEKHPEAEKHPEAEKQPEAEKQPEAEKQPEAEKQPEAEKQPEA 106
Query: 92 DHSGPGEAGP 63
+ E P
Sbjct: 107 EKHPEAEKQP 116
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/70 (25%), Positives = 29/70 (41%)
Frame = -3
Query: 272 HPGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQG 93
HP E E+ P A + + E H + A P E A PEA + ++E++ +
Sbjct: 31 HP--EAEKQPEAEKQPEAEKHPEAEKQPEAEKQPEAEKHPEAEKHPEAEKQPEAEKQPEA 88
Query: 92 DHSGPGEAGP 63
+ E P
Sbjct: 89 EKQPEAEKQP 98
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/66 (24%), Positives = 27/66 (40%)
Frame = -3
Query: 260 EGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSG 81
E E+ P A + E H + A P E + A +PEA + ++E+ + +
Sbjct: 57 EAEKQPEAEKHPEAEKHPEAEKQPEAEKQPEAEKQPEAEKQPEAEKQPEAEKHPEAEKQP 116
Query: 80 PGEAGP 63
E P
Sbjct: 117 EAEKHP 122
Score = 28.3 bits (60), Expect = 6.7
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Frame = -3
Query: 260 EGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGD-HS 84
E E+ P A + + E H + A P E A PEA ++E+ + + H
Sbjct: 105 EAEKHPEAEKQPEAEKHPEAEKHPEAEKHPEAEKHPEAQKHPEAEKHPEAEKHPEAEKHP 164
Query: 83 GPGEAGPGPLHRGP 42
EA G L GP
Sbjct: 165 EAKEATLGLLLFGP 178
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 29.9 bits (64), Expect = 2.2
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Frame = -1
Query: 400 LDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQ--GQELLIQAKKENV-----LL 242
L++E+E+ + E E R + VKA E E+ EQ++A+ ++ IQA + + L
Sbjct: 1543 LEEEIESKDAEAEEERTRIVKAAE-GFALEREEQFKAELADKDDCIQATENELNQVKHQL 1601
Query: 241 QLEAAYRERLMYAYSEVKRRLDYQLE 164
QL ++ L+ A E R L++ E
Sbjct: 1602 QLAQEAKKTLLEASDERDRELEHLKE 1627
>SB_59727| Best HMM Match : C2 (HMM E-Value=0.0018)
Length = 482
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = -1
Query: 220 ERLMYAYSEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQALDRCIADL 41
E M+A +V ++ +EKS A + W VS P+ E +D + D+
Sbjct: 281 EATMFALEDVIQKYSNSIEKSMGTGASAARRQ--WAVSEEENTAAPNAEAANVDSAVRDM 338
Query: 40 ASLAR 26
A +A+
Sbjct: 339 AGMAK 343
>SB_42699| Best HMM Match : SIR2 (HMM E-Value=1.6e-12)
Length = 501
Score = 29.5 bits (63), Expect = 2.9
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Frame = -3
Query: 197 RGEAASGLPAREVERGAPS-RPEAHGRLDSEQRDQG--DHSGPGEAGPGPLHRGPGFAGQ 27
+G + SG+PA + + + E +DSEQR H G GP P G G+
Sbjct: 313 QGSSNSGVPACDPQSMKQELKSEDEENMDSEQRQDSPESHDGDNVNGPCPGWYGKGYG-- 370
Query: 26 EVNRKANR 3
+V R A R
Sbjct: 371 KVKRTAKR 378
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 29.5 bits (63), Expect = 2.9
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 12/95 (12%)
Frame = -3
Query: 329 GRNRG----REDGAVARAGTGAP-----HPGQEGERAPAARGRLQGEAHVRLLRGEAASG 177
G+ RG ++ G + R+G +P P +P ARGR +G V GE SG
Sbjct: 1141 GKGRGEVGSKQRGGLGRSGDKSPVRMEQEPPPRSAASPPARGR-RGRKRV----GEDISG 1195
Query: 176 LPA---REVERGAPSRPEAHGRLDSEQRDQGDHSG 81
+E+E+ PS+ A+ + S + D G
Sbjct: 1196 NEQSLEKEIEKEEPSQSSANSKSPSPEHQAADREG 1230
>SB_24442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 673
Score = 29.5 bits (63), Expect = 2.9
Identities = 28/67 (41%), Positives = 33/67 (49%), Gaps = 11/67 (16%)
Frame = -3
Query: 314 REDGAVARAGT-GA--PHPGQEGERAPAARG-RLQGEAH-------VRLLRGEAASGLPA 168
RE A R+GT GA +PG+ G+RA RG R QG A VR R SG P
Sbjct: 325 REPRASRRSGTHGARCENPGRRGDRAHRERGARTQGVAEIGHAWSAVREPRASRRSGTPH 384
Query: 167 REVERGA 147
+E GA
Sbjct: 385 WNLEGGA 391
>SB_10888| Best HMM Match : Collagen (HMM E-Value=7.5)
Length = 208
Score = 29.5 bits (63), Expect = 2.9
Identities = 31/109 (28%), Positives = 41/109 (37%), Gaps = 9/109 (8%)
Frame = -3
Query: 329 GRNRGREDGAVARAG--TGAPHPGQEGERAPAAR----GRLQGEAHVRLLRGEAASGLPA 168
GR R + G +A +G G+ G A + R GR+ G H+ A SG A
Sbjct: 27 GRGRMADSGGMAGSGHMAGSGRMAGSGRMAGSGRMAGTGRMAGSGHMAGSGRMAGSGRMA 86
Query: 167 REVERGAPSRPEAHGRLDSEQR--DQGDHSGPGE-AGPGPLHRGPGFAG 30
R GR+ R D G +G G AG G + AG
Sbjct: 87 GSGRMAGSGRMAGSGRMAGSGRMADSGRMAGSGRMAGSGRMAGSGRMAG 135
>SB_19884| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3486
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/68 (26%), Positives = 25/68 (36%)
Frame = -3
Query: 329 GRNRGREDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAREVERG 150
GRN GR R+G R+ GR++ AH + G L R +G
Sbjct: 1767 GRNSGRMKSLAHRSGRNGGRMKSLANRSGRNGGRMKSLAHRSMRNGGRMKSLAHRSSRKG 1826
Query: 149 APSRPEAH 126
+ AH
Sbjct: 1827 GRMKSLAH 1834
>SB_31305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 313
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 320 RGREDGAVARAGTGAPHPGQEGERAPAARG 231
RG E AGT A H G G APA G
Sbjct: 204 RGYEQKTPESAGTSARHSGASGREAPAEAG 233
>SB_21966| Best HMM Match : DnaJ (HMM E-Value=5.30001e-40)
Length = 351
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +3
Query: 408 ANFGPNFT*ATYTMTSSDSPE*YS 479
ANFGP FT T+T TS D+ E +S
Sbjct: 89 ANFGPGFT--TFTYTSGDARETFS 110
>SB_16761| Best HMM Match : PDZ (HMM E-Value=1.6e-08)
Length = 889
Score = 28.7 bits (61), Expect = 5.0
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Frame = -1
Query: 370 EWNEGRNQTVKALEDAIEGEKTE--QWRAQGQELLIQAKKENVLLQLEAAYRERLMYAYS 197
EW + L D ++ TE + +AQ ELL+Q +K +++E RE+L
Sbjct: 176 EWGRAATKWDSTL-DQVDSVMTELSKVKAQRDELLLQIEKSEDSIKMEIDSREKL----- 229
Query: 196 EVKRRLDYQLEKSNVERRLAQKHMVD 119
L+ QL+K+ E AQ+ ++
Sbjct: 230 -----LEQQLQKTQTELAKAQQRCLE 250
>SB_320| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1040
Score = 28.7 bits (61), Expect = 5.0
Identities = 27/95 (28%), Positives = 42/95 (44%)
Frame = -1
Query: 415 KLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQL 236
KL+ L KE TE NE + KALE I + + ++G +QAK ++ L
Sbjct: 501 KLSISLKKEFSVTEE--NERLLREKKALESRILDAEEQVSSSKGMITALQAKLDDALNSR 558
Query: 235 EAAYRERLMYAYSEVKRRLDYQLEKSNVERRLAQK 131
EA Y ++ D + +VE LA++
Sbjct: 559 EAKSDWDSNRIYELEEKIKDLSKKLKDVESDLAER 593
>SB_31228| Best HMM Match : EMP24_GP25L (HMM E-Value=0.22)
Length = 350
Score = 28.7 bits (61), Expect = 5.0
Identities = 14/73 (19%), Positives = 35/73 (47%)
Frame = -1
Query: 433 HVKFGPKLAAWLDKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKE 254
H + P+L W++ + + E + + + + +A E + E+ R Q +E + +E
Sbjct: 61 HRECSPELKPWMEAQQKEMEEKLRLKKEEEERIQREAEEAAERERLRIQAEEEARRKAEE 120
Query: 253 NVLLQLEAAYRER 215
+++E R++
Sbjct: 121 EERIRIEEIKRQQ 133
>SB_38454| Best HMM Match : DCX (HMM E-Value=4.2)
Length = 239
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = -3
Query: 170 AREVERGAPSRPE-AHGRLDSEQRDQGDHSGPGEAGPGPLH 51
A+ + + P+R + +HGR +S++ D+ S G GP+H
Sbjct: 69 AKNLSKTTPNRTKPSHGRKNSDRSDRKMSSTTGSIKDGPVH 109
>SB_26664| Best HMM Match : I-set (HMM E-Value=7.6e-06)
Length = 434
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3
Query: 101 DQGDHSGPGEAGPGPLHRGPGFAG 30
D+GD PGE G P P FAG
Sbjct: 205 DKGDRGKPGETGSAPPRMKPIFAG 228
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/93 (25%), Positives = 43/93 (46%)
Frame = -1
Query: 397 DKEVEATENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRE 218
+KEVE NE + + KALE A G+K E+ + + ++ +E LQ + R
Sbjct: 2190 EKEVEMLSRV-NELQEELAKALESAEAGKKAEKQLKEQESEHVELSREKEALQKQLYDRL 2248
Query: 217 RLMYAYSEVKRRLDYQLEKSNVERRLAQKHMVD 119
+ + E R + E S ++ A K +++
Sbjct: 2249 TEISSLKEELSRNKHS-ETSKLDEAEAAKALLE 2280
>SB_47930| Best HMM Match : Vicilin_N (HMM E-Value=1.3)
Length = 769
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -3
Query: 293 RAGTGAPHPGQEGERAPAARGRLQGEAHVRLLRGEAASGL 174
R+ G PGQ+GE P+ GR G ++ + SG+
Sbjct: 429 RSTRGTALPGQDGEDRPSGEGRQSGGPGIQAVWEAGTSGV 468
>SB_40213| Best HMM Match : Pkinase_Tyr (HMM E-Value=1.1e-07)
Length = 750
Score = 28.3 bits (60), Expect = 6.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -1
Query: 328 DAIEGEKTEQWRAQGQELLIQAKKENVL 245
D + + +QW EL ++ KKENVL
Sbjct: 238 DVVLADLDQQWMLDSAELCLEEKKENVL 265
>SB_29523| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 502
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +2
Query: 23 LPGQRSQVRDAAVQGLLLLVRSDRLGHVAHYPVDHVLLGETALHVRLLELVV 178
+ G S ++A + + + V L HV H P D V +G+ L + L L+V
Sbjct: 130 IDGDTSGRQEAGLADVAIEVLHRLLSHVIHGPHDQVGVGDDQLSILFLLLIV 181
>SB_22053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1670
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -3
Query: 293 RAGTGAPHPGQEGERAPAARGRLQGEAHVRLLRGEAASGL 174
R+ G PGQ+GE P+ GR G ++ + SG+
Sbjct: 1096 RSTRGTALPGQDGEDRPSGEGRQSGGPGIQAVWEAGTSGV 1135
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 27.9 bits (59), Expect = 8.8
Identities = 33/107 (30%), Positives = 39/107 (36%)
Frame = -3
Query: 344 RESTGGRNRGREDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAR 165
R TG R R E GA G P G GER G+ +GE G+P
Sbjct: 231 RGETGPRGRPGEPGA---DGVRGPD-GSTGERGETGLDGAPGKKGEDGTKGE--QGVPGA 284
Query: 164 EVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFAGQE 24
+ + G R E E GD G GP PGF+G E
Sbjct: 285 KGQPGL-DREEVV-MPPGESGAAGDLGPDGPPGPKGAPGAPGFSGIE 329
>SB_30893| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 171
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/83 (14%), Positives = 40/83 (48%)
Frame = -1
Query: 379 TENEWNEGRNQTVKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQLEAAYRERLMYAY 200
++ EW + + + +EG+ +W+ + E + +++ + Q + ++ R
Sbjct: 74 SDREWKNRKTENGRTERQRMEGQSDREWKNRKTETR-RTERQRMEEQKDREWKNRKTENG 132
Query: 199 SEVKRRLDYQLEKSNVERRLAQK 131
V++R++ Q ++ +R++ +
Sbjct: 133 RTVRQRMEEQKDREWKDRKIENR 155
>SB_26644| Best HMM Match : Collagen (HMM E-Value=0)
Length = 877
Score = 27.9 bits (59), Expect = 8.8
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = -3
Query: 200 LRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPGEAGP-GPLHRGPGFAGQE 24
LR G P R G P G + EQ +G PG GP GP + PG G +
Sbjct: 110 LRHIGRLGPPGRRGPPGQNGAPGLDGE-NGEQGQKGSSGDPGSEGPVGPPGK-PGMDGAK 167
Query: 23 VN 18
V+
Sbjct: 168 VS 169
>SB_50891| Best HMM Match : CsbD (HMM E-Value=3.4)
Length = 311
Score = 27.9 bits (59), Expect = 8.8
Identities = 22/77 (28%), Positives = 33/77 (42%)
Frame = -3
Query: 254 ERAPAARGRLQGEAHVRLLRGEAASGLPAREVERGAPSRPEAHGRLDSEQRDQGDHSGPG 75
ER + RL+ A + R G A E E+GA + + + E +QG +G
Sbjct: 2 ERLNKEKERLKTRAIGQGKRVNEKEGKGATEQEKGAIKQGKGATEQEKEATEQG--NGAS 59
Query: 74 EAGPGPLHRGPGFAGQE 24
+ G G +G G QE
Sbjct: 60 KQGTGASEQGKGAGEQE 76
>SB_44710| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 835
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +2
Query: 530 TKSVRTRHTSFRVEELEPFFRNKAKSNFAWLTPYRASKGFLVVCCY 667
TK + H+ R + PFF ++ K + W T A+ G++V Y
Sbjct: 149 TKEINNMHSELR--KSIPFFSSRYKGHGIWDTLMAANLGYMVAFMY 192
>SB_34766| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 740
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -3
Query: 683 GLRLRCSNTRPENLCSPCKG*ARQS*TWLYS*RMVPILPLEN 558
G+R +C N ++C C+ R + T + +PI PL N
Sbjct: 122 GVRYKCGNCVDYDICERCESQDRHNSTHAFIKIRIPIPPLAN 163
>SB_33497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 27.9 bits (59), Expect = 8.8
Identities = 30/105 (28%), Positives = 38/105 (36%), Gaps = 1/105 (0%)
Frame = -3
Query: 344 RESTGGRNRGREDGAVARAGTGAPHPGQEGERAPAARGRLQGEAHVRLLRGEAASGLPAR 165
R G N GA + G + ++G R + G R A S P+
Sbjct: 646 RNQPGSGNSSPRSGASSPLGRASSPNSKKGSRVNSPIGA----------RRRANSPGPSI 695
Query: 164 EVERGAPSRPE-AHGRLDSEQRDQGDHSGPGEAGPGPLHRGPGFA 33
RG P AHGR S +G SGP A P H+ G A
Sbjct: 696 NSPRGRAESPSNAHGRASSPSGTRGPVSGPSGARGSP-HQPRGRA 739
>SB_11762| Best HMM Match : 4HBT (HMM E-Value=1.6e-19)
Length = 519
Score = 27.9 bits (59), Expect = 8.8
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = -1
Query: 343 VKALEDAIEGEKTEQWRAQGQELLIQAKKENVLLQL--EAAYRERLMYAYSEVKRRL 179
V ++ED I GEK E R + AK V L ERL YA + +RR+
Sbjct: 91 VVSVEDLITGEKREVSRGFFTFVAFDAKHNKVQLSPIDPVTEEERLQYALASERRRM 147
>SB_10797| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 754
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = -1
Query: 205 AYSEVKRRLDYQLEKSNVERRLAQKHMVDWIVSNVTKAITPDQEKQALDRCIAD 44
A +VKRR D + ++ R + + +W T A P Q +++ +RCI +
Sbjct: 423 ASKDVKRRSDQLVNLASSARHVG---ISEWFARKRTLAGLPPQSRRSFERCITN 473
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,025,148
Number of Sequences: 59808
Number of extensions: 487474
Number of successful extensions: 1964
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 1647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1929
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1925890720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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