Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11g11f
(510 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 2.4
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 2.4
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 5.6
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 21 7.4
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 21 7.4
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 21 7.4
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 21 7.4
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 21 7.4
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 21 7.4
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 21 7.4
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 21 7.4
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 7.4
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 21 9.8
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 9.8
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 2.4
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3
Query: 505 RLRPPVLSRFGS 470
RLRPP+ RFGS
Sbjct: 175 RLRPPLNPRFGS 186
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 22.6 bits (46), Expect = 2.4
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3
Query: 505 RLRPPVLSRFGS 470
RLRPP+ RFGS
Sbjct: 175 RLRPPLNPRFGS 186
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 5.6
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = +2
Query: 383 MWLT*NSDQNWLLGW 427
+W + DQ W+L W
Sbjct: 595 LWYVPSLDQVWILNW 609
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 7.4
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3
Query: 505 RLRPPVLSRFG 473
RLRPP+ RFG
Sbjct: 160 RLRPPLNPRFG 170
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 7.4
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3
Query: 505 RLRPPVLSRFG 473
RLRPP+ RFG
Sbjct: 160 RLRPPLNPRFG 170
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 7.4
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3
Query: 505 RLRPPVLSRFG 473
RLRPP+ RFG
Sbjct: 160 RLRPPLNPRFG 170
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 7.4
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3
Query: 505 RLRPPVLSRFG 473
RLRPP+ RFG
Sbjct: 160 RLRPPLNPRFG 170
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 7.4
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3
Query: 505 RLRPPVLSRFG 473
RLRPP+ RFG
Sbjct: 160 RLRPPLNPRFG 170
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.0 bits (42), Expect = 7.4
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3
Query: 505 RLRPPVLSRFG 473
RLRPP+ RFG
Sbjct: 160 RLRPPLNPRFG 170
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 7.4
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3
Query: 505 RLRPPVLSRFG 473
RLRPP+ RFG
Sbjct: 172 RLRPPLNPRFG 182
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.0 bits (42), Expect = 7.4
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3
Query: 505 RLRPPVLSRFG 473
RLRPP+ RFG
Sbjct: 172 RLRPPLNPRFG 182
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.0 bits (42), Expect = 7.4
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3
Query: 505 RLRPPVLSRFG 473
RLRPP+ RFG
Sbjct: 400 RLRPPLNPRFG 410
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 20.6 bits (41), Expect = 9.8
Identities = 13/50 (26%), Positives = 20/50 (40%)
Frame = +1
Query: 238 EWFQFFHSKTGVTGPYTFGVGLATYLCSKEIYVMEHEYYSGLSLLVMVYV 387
EW S + T FG+G T L S I + H + + + + V
Sbjct: 207 EWEIVHMSHSESTIDSKFGLGFTTDLLSYNILLRRHYSMNSTTYVTLTIV 256
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 20.6 bits (41), Expect = 9.8
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 499 RPPVLSRFGSDLRSIRS 449
+PPV + +GSD I S
Sbjct: 558 KPPVATMYGSDEEIINS 574
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,308
Number of Sequences: 438
Number of extensions: 3577
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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