Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11g05r
         (424 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M22142-1|AAA28869.1|  131|Drosophila melanogaster protein ( D.me...   187   6e-48
BT001651-1|AAN71406.1|  131|Drosophila melanogaster RE44119p pro...   187   6e-48
AJ271817-3|CAB72251.1|  131|Drosophila melanogaster ribosomal pr...   187   6e-48
AE014296-1654|AAF50272.1|  131|Drosophila melanogaster CG3922-PB...   187   6e-48
AE014134-2053|AAF53088.2| 2013|Drosophila melanogaster CG6392-PA...    28   5.9  
U91980-1|AAC47506.1| 2346|Drosophila melanogaster Tpr homolog pr...    27   7.8  
AY122173-1|AAM52685.1|  872|Drosophila melanogaster LD33103p pro...    27   7.8  
AF220353-1|AAF32355.1| 2244|Drosophila melanogaster kinesin-like...    27   7.8  
AE014298-2751|AAF48870.1|  757|Drosophila melanogaster CG6659-PB...    27   7.8  
AE014298-2750|AAF48869.1|  872|Drosophila melanogaster CG6659-PA...    27   7.8  
AE013599-1350|AAF58615.1| 2346|Drosophila melanogaster CG8274-PA...    27   7.8  

>M22142-1|AAA28869.1|  131|Drosophila melanogaster protein (
           D.melanogaster ribosomalprotein S17 gene, complete cds.
           ).
          Length = 131

 Score =  187 bits (455), Expect = 6e-48
 Identities = 89/103 (86%), Positives = 94/103 (91%)
 Frame = -2

Query: 321 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 142
           IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17  IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76

Query: 141 ERERRDNYVPEVSALEHDIIEVDPDTKDMSKMLDFNNINGLXL 13
           ERERRDNYVP VSALE DIIEVD DTK+M K+LDF+NI GL L
Sbjct: 77  ERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQL 119


>BT001651-1|AAN71406.1|  131|Drosophila melanogaster RE44119p
           protein.
          Length = 131

 Score =  187 bits (455), Expect = 6e-48
 Identities = 89/103 (86%), Positives = 94/103 (91%)
 Frame = -2

Query: 321 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 142
           IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17  IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76

Query: 141 ERERRDNYVPEVSALEHDIIEVDPDTKDMSKMLDFNNINGLXL 13
           ERERRDNYVP VSALE DIIEVD DTK+M K+LDF+NI GL L
Sbjct: 77  ERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQL 119


>AJ271817-3|CAB72251.1|  131|Drosophila melanogaster ribosomal
           protein S17 protein.
          Length = 131

 Score =  187 bits (455), Expect = 6e-48
 Identities = 89/103 (86%), Positives = 94/103 (91%)
 Frame = -2

Query: 321 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 142
           IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17  IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76

Query: 141 ERERRDNYVPEVSALEHDIIEVDPDTKDMSKMLDFNNINGLXL 13
           ERERRDNYVP VSALE DIIEVD DTK+M K+LDF+NI GL L
Sbjct: 77  ERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQL 119


>AE014296-1654|AAF50272.1|  131|Drosophila melanogaster CG3922-PB
           protein.
          Length = 131

 Score =  187 bits (455), Expect = 6e-48
 Identities = 89/103 (86%), Positives = 94/103 (91%)
 Frame = -2

Query: 321 IEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEE 142
           IEKYYTRLTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQEE
Sbjct: 17  IEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEE 76

Query: 141 ERERRDNYVPEVSALEHDIIEVDPDTKDMSKMLDFNNINGLXL 13
           ERERRDNYVP VSALE DIIEVD DTK+M K+LDF+NI GL L
Sbjct: 77  ERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQL 119


>AE014134-2053|AAF53088.2| 2013|Drosophila melanogaster CG6392-PA
            protein.
          Length = 2013

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
 Frame = -2

Query: 264  EEIAIIPTK--PLRNKIAGFATHLMRRLRHSQVRGISI-KLQEEERERRDNYVPEVSALE 94
            +E+A + T    L+++++     L   LR  Q++  +I +LQ +  E  +  +    ++E
Sbjct: 1122 QEVATLKTSITELQSQVSDLKAELENHLRQIQLKDGNIARLQTDFEEMSERCL----SME 1177

Query: 93   HDIIEVDPDTKDMSKMLD 40
              + E+D DTK   ++LD
Sbjct: 1178 VRLAELDEDTKQKQELLD 1195


>U91980-1|AAC47506.1| 2346|Drosophila melanogaster Tpr homolog
           protein.
          Length = 2346

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 11/40 (27%), Positives = 25/40 (62%)
 Frame = -2

Query: 162 SIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMSKML 43
           +IKL++EE++  D +  E++++  ++ E      ++SK L
Sbjct: 874 AIKLKDEEKQLADKWQAELTSVREELAEKVNKVNELSKKL 913


>AY122173-1|AAM52685.1|  872|Drosophila melanogaster LD33103p
           protein.
          Length = 872

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -2

Query: 153 LQEEERERRDNYVPEVSALEHDIIEVDPDTKDMSKML 43
           L EE+RER   YV E    EH +   D  +K+  K L
Sbjct: 432 LTEEQRERARKYVLEDFIEEHFVSMSDMSSKETEKQL 468


>AF220353-1|AAF32355.1| 2244|Drosophila melanogaster kinesin-like
            kinetochore motorprotein CENP-meta protein.
          Length = 2244

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
 Frame = -2

Query: 264  EEIAIIPTK--PLRNKIAGFATHLMRRLRHSQVRGISI-KLQEEERERRDNYVPEVSALE 94
            +E+A + T    L+++++     L   LR  Q++  +I +LQ +  E  +  +    ++E
Sbjct: 1122 QEVATLKTSITELQSQVSDLNAELENHLRQIQLKDGNIARLQTDFEEMSERCL----SME 1177

Query: 93   HDIIEVDPDTKDMSKMLD 40
              + E+D DTK   ++LD
Sbjct: 1178 VRLAELDEDTKQKQELLD 1195


>AE014298-2751|AAF48870.1|  757|Drosophila melanogaster CG6659-PB,
           isoform B protein.
          Length = 757

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -2

Query: 153 LQEEERERRDNYVPEVSALEHDIIEVDPDTKDMSKML 43
           L EE+RER   YV E    EH +   D  +K+  K L
Sbjct: 317 LTEEQRERARKYVLEDFIEEHFVSMSDMSSKETEKQL 353


>AE014298-2750|AAF48869.1|  872|Drosophila melanogaster CG6659-PA,
           isoform A protein.
          Length = 872

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = -2

Query: 153 LQEEERERRDNYVPEVSALEHDIIEVDPDTKDMSKML 43
           L EE+RER   YV E    EH +   D  +K+  K L
Sbjct: 432 LTEEQRERARKYVLEDFIEEHFVSMSDMSSKETEKQL 468


>AE013599-1350|AAF58615.1| 2346|Drosophila melanogaster CG8274-PA
           protein.
          Length = 2346

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 11/40 (27%), Positives = 25/40 (62%)
 Frame = -2

Query: 162 SIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMSKML 43
           +IKL++EE++  D +  E++++  ++ E      ++SK L
Sbjct: 874 AIKLKDEEKQLADKWQAELTSVREELAEKVNKVNELSKKL 913


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,378,132
Number of Sequences: 53049
Number of extensions: 298119
Number of successful extensions: 790
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 779
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 787
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1292733852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)