Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV11g04r
(693 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 231 9e-60
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 228 9e-59
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 227 3e-58
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 221 1e-56
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 206 4e-52
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 206 4e-52
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 204 1e-51
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 199 6e-50
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 196 4e-49
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 194 2e-48
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 194 2e-48
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 186 3e-46
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 179 5e-44
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 117 4e-43
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 173 5e-42
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 171 2e-41
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 169 4e-41
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 168 1e-40
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 165 9e-40
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 158 1e-37
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 155 1e-36
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 147 2e-34
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 145 1e-33
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 141 2e-32
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 136 5e-31
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 136 6e-31
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 136 6e-31
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 136 6e-31
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 135 1e-30
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 133 3e-30
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 132 1e-29
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 131 1e-29
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 131 2e-29
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 130 2e-29
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 130 2e-29
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 128 1e-28
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 128 1e-28
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 127 3e-28
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 126 4e-28
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 126 7e-28
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 125 9e-28
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 124 2e-27
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 122 6e-27
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 122 1e-26
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 122 1e-26
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 121 1e-26
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 121 2e-26
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 119 6e-26
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 119 6e-26
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 117 2e-25
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 117 2e-25
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 116 4e-25
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 116 5e-25
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 116 7e-25
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 114 2e-24
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 113 4e-24
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 113 4e-24
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 110 3e-23
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 110 4e-23
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 109 6e-23
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 105 8e-22
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 105 1e-21
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 104 2e-21
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 103 4e-21
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 102 1e-20
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 101 2e-20
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 99 5e-20
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 100 7e-20
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 99 9e-20
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 98 2e-19
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 97 4e-19
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 97 4e-19
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 96 6e-19
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 95 1e-18
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 95 1e-18
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 92 1e-17
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 90 5e-17
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 87 5e-16
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 81 2e-14
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 81 3e-14
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 77 4e-13
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 69 8e-11
UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18; ... 69 8e-11
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 69 1e-10
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 62 9e-09
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 62 2e-08
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 59 9e-08
UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 58 2e-07
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 57 5e-07
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 55 2e-06
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 55 2e-06
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 53 8e-06
UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8; Ba... 50 5e-05
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 49 9e-05
UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxida... 49 1e-04
UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal ... 48 2e-04
UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1; Ca... 47 4e-04
UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum l... 47 5e-04
UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3; Py... 46 9e-04
UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1; Ja... 45 0.002
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 44 0.003
UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1; Clon... 43 0.008
UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol oxid... 42 0.011
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 42 0.019
UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1; Rhod... 41 0.025
UniRef50_Q34505 Cluster: Cytochrome c oxidase subunit I; n=46; N... 41 0.033
UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit... 40 0.076
UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase, sub... 37 0.41
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 37 0.54
UniRef50_Q9EMW4 Cluster: AMV085; n=1; Amsacta moorei entomopoxvi... 35 2.2
UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 33 5.0
UniRef50_A5I8K9 Cluster: Putative uncharacterized protein; n=1; ... 33 6.6
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 231 bits (566), Expect = 9e-60
Identities = 105/156 (67%), Positives = 126/156 (80%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LGF+FLFT
Sbjct: 290 HHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFT 349
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
VGGLTG++LANSS+DI LHDTYYVVAHFHYVLS ++ +PLFTG +LNS
Sbjct: 350 VGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLNSVW 409
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
KI F +FIGVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 410 TKIHFGVMFIGVNLTFFPQHFLGLAGMPRRYSDYPD 445
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 228 bits (558), Expect = 9e-59
Identities = 104/156 (66%), Positives = 125/156 (80%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LGF+FLFT
Sbjct: 290 HHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFT 349
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
VGGLTG++LANSSIDI LHDTYYVVAHFHYVLS ++ +PLFTG +L+
Sbjct: 350 VGGLTGIVLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGFVHWFPLFTGYTLHDTW 409
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
KI F +FIGVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 410 TKIHFGVMFIGVNLTFFPQHFLGLAGMPRRYSDYPD 445
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 227 bits (554), Expect = 3e-58
Identities = 101/156 (64%), Positives = 127/156 (81%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG+ + ++ +L LGF+FLFT
Sbjct: 290 HHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFLFT 349
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
VGGLTG++LANSS+DI LHDTYYVVAHFHYVLS I+ +PLF+G +L+
Sbjct: 350 VGGLTGIVLANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFIHWFPLFSGYTLDQTY 409
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
KI F +FIGVN+TFFPQHFLGL+G+PRRYSDYPD
Sbjct: 410 AKIHFTIMFIGVNLTFFPQHFLGLSGMPRRYSDYPD 445
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 221 bits (540), Expect = 1e-56
Identities = 100/156 (64%), Positives = 122/156 (78%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+FT+G+D+DTRAYFTSAT+IIA+PTGIKIF +AT G ++ N IL +GF+FLFT
Sbjct: 274 HHMFTIGMDVDTRAYFTSATMIIAIPTGIKIFSWMATFSGVKLMNNLMILWTMGFIFLFT 333
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
VGGLTGV+L+NSS+D+ LHDTYY VAHFHYVLS I +P+F GL +N Y
Sbjct: 334 VGGLTGVVLSNSSVDVVLHDTYYGVAHFHYVLSMGAVFSILGGFIYWFPMFFGLMMNEYF 393
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
LKI F+ FIGVN+ FFPQHFLGL+G+PRRYSDYPD
Sbjct: 394 LKIHFYLTFIGVNLIFFPQHFLGLSGMPRRYSDYPD 429
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 206 bits (503), Expect = 4e-52
Identities = 97/137 (70%), Positives = 112/137 (81%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+FTVG+D+DTRAYFTSAT+IIAVPTGIK+F LAT HGTQI Y+P L LGFVFLFT
Sbjct: 203 HHMFTVGMDVDTRAYFTSATMIIAVPTGIKVFSWLATFHGTQILYSPVTLWTLGFVFLFT 262
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
VGGLTGV+LANSSIDI LHDTYYVVAHFHYVLS + +PLFTG++LN++
Sbjct: 263 VGGLTGVVLANSSIDIVLHDTYYVVAHFHYVLSMGAVFAIMAGIVQWFPLFTGVTLNNFF 322
Query: 278 LKIQFFTIFIGVNITFF 228
LKIQF +FIGVN+TFF
Sbjct: 323 LKIQFIIMFIGVNLTFF 339
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 206 bits (503), Expect = 4e-52
Identities = 94/156 (60%), Positives = 116/156 (74%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G +++ P++L LGFVF+FT
Sbjct: 290 HHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSLHFIPSLLFALGFVFMFT 349
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GGL+GV+LAN+S+DI HDTYYVVAHFHYVLS P GL N
Sbjct: 350 IGGLSGVVLANASLDIAFHDTYYVVAHFHYVLSMGAVFALFSGWYFWIPKILGLDYNLLY 409
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
K F+ +F GVN+TFFPQHFLGL G+PRR SDYPD
Sbjct: 410 SKAHFWVLFTGVNLTFFPQHFLGLQGMPRRISDYPD 445
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 204 bits (499), Expect = 1e-51
Identities = 96/151 (63%), Positives = 114/151 (75%)
Frame = -2
Query: 623 VGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLT 444
VG+ + RAYFTSAT+IIA+PTGIK F LAT G I ++P +L LGF+FLFTVGGLT
Sbjct: 296 VGMXVXPRAYFTSATMIIAIPTGIKAFSWLATXXGGTIKWDPPMLWALGFIFLFTVGGLT 355
Query: 443 GVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQF 264
G++LANSS+DI LHDTYYVVAHFHYVLS + +PLFTG +LN+ K F
Sbjct: 356 GIVLANSSLDIALHDTYYVVAHFHYVLSMGAVFAILAGFTHWFPLFTGYTLNNAWAKAHF 415
Query: 263 FTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
+F GVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 416 GVMFTGVNLTFFPQHFLGLAGMPRRYSDYPD 446
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 199 bits (485), Expect = 6e-50
Identities = 91/156 (58%), Positives = 116/156 (74%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH++TVG+D+DTRAYFT+AT+IIA+PTG+KIF LAT +G +++ +L LGFV +FT
Sbjct: 316 HHMYTVGLDVDTRAYFTAATLIIAIPTGVKIFSWLATCYGGSLHFTTPMLFALGFVVMFT 375
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GGL+GV+LAN+S +I HDTYYVVAHFHYVLS P GLS ++
Sbjct: 376 IGGLSGVVLANASENIAFHDTYYVVAHFHYVLSMGAVFALFSGWYFWIPKIIGLSYDTKA 435
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
KI F+ +FIGVN+TFFPQHFLGL G+PRR SDYPD
Sbjct: 436 SKIHFWILFIGVNLTFFPQHFLGLQGMPRRISDYPD 471
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 196 bits (478), Expect = 4e-49
Identities = 91/156 (58%), Positives = 114/156 (73%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF +ATI I+ +L +GF+FLFT
Sbjct: 297 HHMYTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATIWEGSIHLKTPMLFAIGFIFLFT 356
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GGLTG++LANS +DI+LHDTYYVVAHFHYVLS + TGL +
Sbjct: 357 IGGLTGIVLANSGLDISLHDTYYVVAHFHYVLSMGAVFAIFAGFYYWFGKITGLQYPETL 416
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
+I F++ FIGVN+TF P HFLGLAG+PRR DYPD
Sbjct: 417 GQIHFWSTFIGVNLTFMPMHFLGLAGMPRRIPDYPD 452
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 194 bits (473), Expect = 2e-48
Identities = 92/157 (58%), Positives = 115/157 (73%), Gaps = 2/157 (1%)
Frame = -2
Query: 635 HIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN--YNPNIL*RLGFVFLF 462
H++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT+ G+ N + + LGF+FLF
Sbjct: 256 HMYVVGMDVDTRAYFTAATMIIAVPTGIKIFSWLATVSGSGRNLIFTTPMAWALGFIFLF 315
Query: 461 TVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSY 282
T+GGLTG++L+NSS+DI LHDTYYVVAHFHYVLS + TG +
Sbjct: 316 TIGGLTGIVLSNSSLDILLHDTYYVVAHFHYVLSMGAVFAIFGGFYLWFGKITGYAYKDI 375
Query: 281 ILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
I F+ +F+GVNITFFPQHFLGLAG+PRRY+DYPD
Sbjct: 376 YGLIHFWLMFLGVNITFFPQHFLGLAGLPRRYADYPD 412
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 194 bits (472), Expect = 2e-48
Identities = 90/156 (57%), Positives = 111/156 (71%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+FTVG+D+DTRAYFT+AT+IIAVPTGIKIF +AT+ G I Y +L +GF+FLFT
Sbjct: 292 HHMFTVGLDVDTRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFT 351
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GGLTG++LANS +DI LHDTYYVVAHFHYVLS G + +
Sbjct: 352 IGGLTGIVLANSGLDIALHDTYYVVAHFHYVLSMGAVFALFAGFYYWVGKIFGRTYPETL 411
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
+I F+ F GVN+TFFP HFLGL+G+PRR DYPD
Sbjct: 412 GQIHFWITFFGVNLTFFPMHFLGLSGMPRRIPDYPD 447
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 186 bits (454), Expect = 3e-46
Identities = 82/156 (52%), Positives = 110/156 (70%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+FT G+ ++ + YFT+AT++IAVPTGIKIF +ATI G I++ ++ LGF+FLFT
Sbjct: 332 HHMFTTGMSVNVKMYFTAATMVIAVPTGIKIFSWIATIWGGSISFKTPMVWALGFIFLFT 391
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
VGG+TGV+LAN +D LHDTYYVVAHFHYVLS +P +G N ++
Sbjct: 392 VGGVTGVVLANGGVDDVLHDTYYVVAHFHYVLSLGAVFGLFAGFYYWFPKMSGKMYNEFL 451
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
++ F+ F GVN+ FFP HFLGL+G+PRRY DYP+
Sbjct: 452 GQLHFWVFFAGVNLLFFPMHFLGLSGMPRRYPDYPE 487
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 179 bits (436), Expect = 5e-44
Identities = 84/159 (52%), Positives = 108/159 (67%), Gaps = 3/159 (1%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY---NPNIL*RLGFVF 468
HH+F G+DIDTRAYFT+AT++IAVPTG+K+F LATI G + +P+ +G V
Sbjct: 293 HHMFVAGLDIDTRAYFTAATLMIAVPTGVKVFNWLATIFGGVYSLKHSHPSTFWAIGVVL 352
Query: 467 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 288
LFT+GGLTGVILAN+++ LHD+YYVVAHFHYVLS +P +TG+
Sbjct: 353 LFTIGGLTGVILANAALSTLLHDSYYVVAHFHYVLSMGAVFAIFGGFWFWFPFWTGMVPR 412
Query: 287 SYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
++ F FIGVN TFFP H++GL G+PRRY DYPD
Sbjct: 413 KDLVLTHFMLTFIGVNFTFFPMHWMGLTGMPRRYQDYPD 451
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 117 bits (282), Expect(2) = 4e-43
Identities = 60/100 (60%), Positives = 73/100 (73%), Gaps = 14/100 (14%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH++TVG+D+DTRAYFT+AT+IIAVPTGIKIF LAT +G I P +L LGFVFLFT
Sbjct: 349 HHMYTVGLDVDTRAYFTAATLIIAVPTGIKIFSWLATCYGGSIKMTPVMLFSLGFVFLFT 408
Query: 458 VGGL--------------TGVILANSSIDITLHDTYYVVA 381
+GGL +GV+LAN+S+DI HDTYYVVA
Sbjct: 409 IGGLLNHLLWKINKFRFVSGVVLANASLDIAFHDTYYVVA 448
Score = 80.6 bits (190), Expect(2) = 4e-43
Identities = 37/77 (48%), Positives = 46/77 (59%)
Frame = -2
Query: 401 DTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQ 222
+T + HFHYVLS P G + + + K+QF+ +FIGVN TFFPQ
Sbjct: 476 ETMLFIVHFHYVLSMGAVFAMFAGWYFWSPKMLGFNYDLNLAKMQFWLLFIGVNATFFPQ 535
Query: 221 HFLGLAGIPRRYSDYPD 171
HFLGL G+PRR SDYPD
Sbjct: 536 HFLGLQGMPRRISDYPD 552
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 173 bits (420), Expect = 5e-42
Identities = 79/122 (64%), Positives = 93/122 (76%)
Frame = -2
Query: 536 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSX 357
LAT+HG I ++P +L LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS
Sbjct: 325 LATLHGGTIKWDPPMLWALGFIFLFTVGGLTGIVLANSSLDIALHDTYYVVAHFHYVLSM 384
Query: 356 XXXXXXXXXXIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 177
+ +PLFTG +LNS K F +F GVN+TFFPQHFLGLAG+PRRYSDY
Sbjct: 385 GAVFAILAGFTHWFPLFTGYTLNSAWAKAHFGVMFTGVNLTFFPQHFLGLAGMPRRYSDY 444
Query: 176 PD 171
PD
Sbjct: 445 PD 446
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 171 bits (415), Expect = 2e-41
Identities = 81/157 (51%), Positives = 105/157 (66%), Gaps = 1/157 (0%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQI-NYNPNIL*RLGFVFLF 462
HH++T GID T+AYFT+AT++IA+PTGIK+F +AT+ G I Y P GFV LF
Sbjct: 293 HHMYTSGIDTSTKAYFTAATMVIAIPTGIKVFNWIATMWGGSIWMYTPMYF-AAGFVVLF 351
Query: 461 TVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSY 282
T+GG+TG+IL+N+ ID ++HDT+YVV HFHYVLS + TGLS +
Sbjct: 352 TIGGITGIILSNAGIDTSIHDTHYVVGHFHYVLSMGAVFAIYGGFYYWWGKMTGLSYSES 411
Query: 281 ILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
+ + F+ FIGVN TFFP HFLG G+PRR DYPD
Sbjct: 412 LGQAHFWMTFIGVNFTFFPMHFLGSGGMPRRIPDYPD 448
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 169 bits (412), Expect = 4e-41
Identities = 78/130 (60%), Positives = 101/130 (77%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+FTVG+D+DTRAYFTSAT+IIA+PTG+K+F LAT+HG I ++ +L LGF+FLFT
Sbjct: 55 HHMFTVGMDVDTRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWDTPMLWALGFIFLFT 114
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
VGGLTG+ILANSS+DI LHDTYYVVAHFHYVLS ++ +PLF+G +L++
Sbjct: 115 VGGLTGIILANSSLDIVLHDTYYVVAHFHYVLSMGAVFAIMGGFVHWFPLFSGYTLHNTW 174
Query: 278 LKIQFFTIFI 249
KI F +F+
Sbjct: 175 TKIHFGVMFM 184
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 168 bits (409), Expect = 1e-40
Identities = 77/156 (49%), Positives = 101/156 (64%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH++T G+DIDTR YF++AT+IIA+P+ +KIF L T G+ P F+FLFT
Sbjct: 300 HHMYTAGLDIDTRTYFSAATMIIAIPSAVKIFNWLGTFFGSNQKMQPLWCWTYSFIFLFT 359
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
VGGL+G+IL+ +S+DI LHDTYYVVAHFHY LS P G+S +S +
Sbjct: 360 VGGLSGIILSAASLDIILHDTYYVVAHFHYTLSLGAIYGIFCGFCLWLPYMYGISFDSVM 419
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
+ F F+G N+TFFP HF GL G+PR+ DYPD
Sbjct: 420 MMAVFVCFFVGTNMTFFPMHFAGLQGMPRKILDYPD 455
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 165 bits (401), Expect = 9e-40
Identities = 76/156 (48%), Positives = 102/156 (65%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH++TVG+ + +AYF AT++IAVPTGIKIF +AT+ I++ ++ LGF+FLFT
Sbjct: 395 HHMYTVGMTLTQQAYFMVATMVIAVPTGIKIFSWIATMWMGSISFKTPMMFALGFIFLFT 454
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GG TG+IL+ + +D HDTYYVVAHFHYV+S +G +
Sbjct: 455 LGGTTGIILSQAGVDRAYHDTYYVVAHFHYVMSLGAVFGIFAAVYYWIGKMSGRQYPEWA 514
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
++ F+ FIG NITFFPQHFLG G+PRRY DYPD
Sbjct: 515 GQVHFWVFFIGTNITFFPQHFLGRQGMPRRYIDYPD 550
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 158 bits (383), Expect = 1e-37
Identities = 70/117 (59%), Positives = 91/117 (77%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+FTVG+D+DTRAYFT+AT+IIAVPTGIK+F +AT+ G+ + + + LGFVFLFT
Sbjct: 267 HHMFTVGMDVDTRAYFTAATMIIAVPTGIKVFSWMATLQGSNLQWETPLFWALGFVFLFT 326
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 288
+GGLTG++LANSSID+ LHDTYYVVAHFHYVLS + +PLF+G +L+
Sbjct: 327 LGGLTGIVLANSSIDVVLHDTYYVVAHFHYVLSMGAVFAIFAGFTHWFPLFSGYNLH 383
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 155 bits (375), Expect = 1e-36
Identities = 77/138 (55%), Positives = 91/138 (65%)
Frame = -2
Query: 617 IDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGV 438
+ + TRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY+P++L LGFVFLFTVGGLTGV
Sbjct: 1 LTLHTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYSPSLLWALGFVFLFTVGGLTGV 60
Query: 437 ILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQFFT 258
+LANSS+DI LHDTYYVVAHFHYVLS P + ++K F
Sbjct: 61 VLANSSLDIVLHDTYYVVAHFHYVLSMGACICYYVSIYPLMPFINWVINKPLMIKNSIFN 120
Query: 257 IFIGVNITFFPQHFLGLA 204
FP FL ++
Sbjct: 121 NIFSCKFNIFPPTFLSIS 138
Score = 51.2 bits (117), Expect = 2e-05
Identities = 30/64 (46%), Positives = 36/64 (56%)
Frame = -1
Query: 345 CNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLI 166
C Y IY L+ FI K L KNSIF NI+ K+NIF TF S + ST+ LS LI
Sbjct: 92 CYYVSIYPLMPFINWVINKPLMIKNSIFNNIFSCKFNIFPPTFLSISRDASTMLWLSWLI 151
Query: 165 YFMK 154
+K
Sbjct: 152 LLLK 155
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 147 bits (357), Expect = 2e-34
Identities = 71/155 (45%), Positives = 99/155 (63%), Gaps = 1/155 (0%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY-NPNIL*RLGFVFLF 462
HH+F VG D T +F+S T+II VPTGIK+F L ++ + +P + +GF+FLF
Sbjct: 380 HHMFMVGFDSLTGVFFSSITMIIGVPTGIKVFSWLYMLNSCGMRVLDPIVWWLVGFIFLF 439
Query: 461 TVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSY 282
TVGG+TGV L+ S++DI HDT++VVAHFHYVLS + +P G SLN Y
Sbjct: 440 TVGGVTGVALSASALDILFHDTWFVVAHFHYVLSLGSYSSIVIMLVWWWPFIVGYSLNKY 499
Query: 281 ILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 177
+L+ + +G N+ FFP H+LG+ G+PRR S Y
Sbjct: 500 LLQGHWLLSMVGFNLCFFPMHYLGIHGLPRRVSCY 534
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 145 bits (351), Expect = 1e-33
Identities = 71/158 (44%), Positives = 97/158 (61%), Gaps = 2/158 (1%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY-NPNIL*RLGFVFLF 462
HH++T G+++DTRAYFTS TI+I++PTG K+F + T + + + L L F+ F
Sbjct: 295 HHMYTTGLEVDTRAYFTSTTILISIPTGTKVFNWICTYMSSNFGMIHSSSLLSLLFICTF 354
Query: 461 TVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSL-NS 285
T GG TGVIL N++ID+ LHDTYYV+AHFH+VLS F G +L +
Sbjct: 355 TFGGTTGVILGNAAIDVALHDTYYVIAHFHFVLSIGAIIGLFTTVSAFQDNFFGKNLREN 414
Query: 284 YILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
I+ + F+GV +TF P HFLG +PRR DYPD
Sbjct: 415 SIVILWSMLFFVGVILTFLPMHFLGFNVMPRRIPDYPD 452
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 141 bits (341), Expect = 2e-32
Identities = 71/157 (45%), Positives = 97/157 (61%), Gaps = 3/157 (1%)
Frame = -2
Query: 632 IFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQ--INYNPNIL*RLGFVFLFT 459
++T G+++DTRA+FTS TI+I++PTG K+F L T T I ++ ++L L F+ FT
Sbjct: 1 MYTTGLEVDTRAFFTSTTILISIPTGTKVFNWLCTYMSTNFGITHSSSLL-SLLFICTFT 59
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSL-NSY 282
GG TGVIL N +ID+ LHDTYYV+AHFH+VLS F G +L +
Sbjct: 60 FGGTTGVILGNGAIDVALHDTYYVIAHFHFVLSIGAIIALFTSVSFFQESFFGKTLRENT 119
Query: 281 ILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
I+ + F+GV +TF P HFLG +PRR DYPD
Sbjct: 120 IIVLWSILFFVGVVLTFLPMHFLGFNVMPRRIPDYPD 156
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 136 bits (329), Expect = 5e-31
Identities = 66/156 (42%), Positives = 92/156 (58%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+F VG+ + +F +++IA+PTGIK+F AT+ G +I +N ++ + F+ F
Sbjct: 308 HHMFAVGLGMYADIFFAVGSLLIAIPTGIKVFNWTATLWGGEIQFNTSLHFAVAFLLQFV 367
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GGLTG++ A ID L DTY+VVAHFHYVL +P TG LN I
Sbjct: 368 IGGLTGIMFAAVPIDWQLTDTYFVVAHFHYVLIGGLVFALFSAAYYWFPKMTGRMLNERI 427
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
+QF+ +G N+TF QHFLGL G+PRR Y D
Sbjct: 428 GILQFWLWVLGFNMTFMVQHFLGLMGMPRRVYTYAD 463
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 136 bits (328), Expect = 6e-31
Identities = 65/156 (41%), Positives = 96/156 (61%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+FT G+ +FT+++ +IA+P+G++IF +AT+ G++ +L LGF +F
Sbjct: 311 HHMFTAGLPQLGSNFFTASSAMIAIPSGVQIFCWIATLWGSKPKLATPLLHVLGFFLIFI 370
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GGL+GV++A+ D+ HDTY+VVAHFHYVL YP FTG ++ +
Sbjct: 371 IGGLSGVMVASVPFDMQAHDTYFVVAHFHYVLIGGAVFPLLGGLYYWYPKFTGRMMSERL 430
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
K+ F+ F G N+TFFP H LGL G+PRR Y D
Sbjct: 431 GKVAFWVTFAGFNLTFFPMHKLGLEGMPRRVYTYLD 466
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 136 bits (328), Expect = 6e-31
Identities = 67/159 (42%), Positives = 100/159 (62%), Gaps = 3/159 (1%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN---PNIL*RLGFVF 468
HH+FT GI + +F++A++ +A+P+GI++F +ATI ++ + P++ LGF+F
Sbjct: 315 HHMFTTGIPSLSLGFFSAASMAVAIPSGIQVFSWIATIASSKERFRITTPSLF-VLGFLF 373
Query: 467 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 288
+FTVGG+TGV++A ID +HDTY+VVAHFHYVL P F+ L+
Sbjct: 374 IFTVGGVTGVMVALVPIDFQVHDTYFVVAHFHYVLIGGMVFPLFATFYYWIPAFSRNMLS 433
Query: 287 SYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
+ + F+ +FIG N+TFFP H GL G+PRR YPD
Sbjct: 434 ERLGRWVFWLMFIGFNVTFFPMHMAGLLGMPRRVRTYPD 472
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 136 bits (328), Expect = 6e-31
Identities = 67/154 (43%), Positives = 92/154 (59%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+FT G R +F + T++IAVPTGIKIF T+ G +I N +L GF+ F
Sbjct: 300 HHMFTSGTPGWLRMFFMATTMLIAVPTGIKIFSWCGTLWGGKIQLNSAMLFAFGFLSSFM 359
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GGLTGV++A+ DI +HDTY+VV HFHYVL + +P TG +N +
Sbjct: 360 IGGLTGVMVASVPFDIHVHDTYFVVGHFHYVLFGGSAFALFSGVYHWFPKMTGRMVNEPL 419
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 177
++ F FIG+N+TF P H LGL G+ RR + Y
Sbjct: 420 GRLHFILTFIGMNLTFMPMHELGLMGMNRRIALY 453
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 135 bits (326), Expect = 1e-30
Identities = 62/156 (39%), Positives = 97/156 (62%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+FTVG+D+DTR YF+SAT++IA+PT IK+F + + + + + F+ +F
Sbjct: 47 HHMFTVGLDVDTRVYFSSATLLIALPTSIKVFSWMVGLRRMALASSAAWY-VVAFLLMFL 105
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GG+TG++LANS +D+ +HD+YYVVAHFHYVLS ++ + L +G +++
Sbjct: 106 LGGVTGLVLANSEVDLVMHDSYYVVAHFHYVLSLGAVFGLLNGVLSCHELCSGYRSAAWL 165
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
L++Q + G F+ H G G+PRR D PD
Sbjct: 166 LRVQVVLLVWGTTCIFWGMHLSGTLGLPRRVPDAPD 201
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 133 bits (322), Expect = 3e-30
Identities = 67/150 (44%), Positives = 89/150 (59%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+FT G+ A F AT+ IA+PTGIKIF L TI G + Y +L + F+ F
Sbjct: 298 HHMFTTGLGPIANAIFAVATMAIAIPTGIKIFNWLLTIWGGNVKYTTAMLYAVSFIPSFV 357
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GG+TGV+LA ++ D HDTY+VVAHFHYV+ +P G L+ +
Sbjct: 358 LGGVTGVMLAAAAADYQFHDTYFVVAHFHYVIIGGVVFGLLAGVHFWWPKMFGKILHETM 417
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRR 189
KI F FIG ++TFF QHF+GL G+PRR
Sbjct: 418 GKISFVLFFIGFHLTFFIQHFVGLMGMPRR 447
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 132 bits (318), Expect = 1e-29
Identities = 62/153 (40%), Positives = 90/153 (58%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+FT G++ F +T++IA+P+ IK F ATI G ++ +N L + F+ +F
Sbjct: 341 HHMFTSGMNPAVGMAFMVSTMMIALPSAIKTFNWTATIWGGKLEFNTVTLNCIAFLSMFI 400
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
VGGL+G+ +A +D+ HDTY++VAHFHY+L +P G +N +
Sbjct: 401 VGGLSGIFMAAVPVDVYFHDTYFIVAHFHYILFGATLFGVFAGIQFWFPKMFGRMMNEKL 460
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSD 180
K F FIG N TFFP HFLG+ G+PRRY+D
Sbjct: 461 GKTHFVLTFIGANGTFFPMHFLGMQGMPRRYAD 493
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 131 bits (317), Expect = 1e-29
Identities = 66/157 (42%), Positives = 95/157 (60%), Gaps = 2/157 (1%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+F VG+D+D+RAYF +I+I +PT +K+F + + T + + + F+F+F
Sbjct: 292 HHMFVVGMDVDSRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFL 351
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+G +TG+ L+N IDI LHDTY+VV HFHYVLS I + L L + Y+
Sbjct: 352 IGAVTGLFLSNVGIDIMLHDTYFVVGHFHYVLSLGAVVGFFTGFI--HFLAKWLPIELYL 409
Query: 278 LKIQFF--TIFIGVNITFFPQHFLGLAGIPRRYSDYP 174
+ +F T+FIG N+ FFP H LG+ PRR SDYP
Sbjct: 410 FWMFYFISTLFIGSNMLFFPMHSLGMYAFPRRISDYP 446
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 131 bits (316), Expect = 2e-29
Identities = 64/154 (41%), Positives = 92/154 (59%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+F VG+ A+F +A+ +IAVPTG+KIF LAT+ +N ++L +GF+ +F
Sbjct: 307 HHMFAVGLGPLANAFFGAASFLIAVPTGVKIFNWLATMWQGSLNLTTSMLYAIGFISMFI 366
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GG++GV LA+ I++ D+YYVVAH HYVL +P TG L+ +
Sbjct: 367 IGGISGVTLASPPINVQQTDSYYVVAHMHYVLFGGAIQGIFAGIFYWFPKMTGRMLDERL 426
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 177
K QF+ + I N+TFFP H G AG+PRR Y
Sbjct: 427 GKWQFWLMLISFNLTFFPMHLSGNAGMPRRIYTY 460
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 130 bits (315), Expect = 2e-29
Identities = 66/155 (42%), Positives = 92/155 (59%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+F G+ TR F+ T++IAVPTGIKIF + T++ I++ +L LG VF+F
Sbjct: 245 HHMFVSGVPNWTRVLFSYTTLLIAVPTGIKIFNWMLTLYRGAIHFRSQMLYALGGVFMFL 304
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GGLTG+ L +ID+ + D+ +VV HFHYVL I+ +PL TG +
Sbjct: 305 IGGLTGLPLGMVAIDLGVSDSLFVVGHFHYVLGMAITLGILGAVIHWFPLATGKYYPENL 364
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 174
K+ F+ IF G NI +F Q G+ G PRRY DYP
Sbjct: 365 GKLSFWLIFAGANIFYFLQMVAGMLGNPRRYPDYP 399
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 130 bits (315), Expect = 2e-29
Identities = 65/154 (42%), Positives = 92/154 (59%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH FT+G ++F+ T+ I++PTG+KIF L T++ +I++ +L L F+ F
Sbjct: 329 HHFFTMGNSASVNSFFSITTMAISIPTGVKIFNWLFTMYKGRISFTTPMLWALAFIPNFV 388
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GG+TGV+LA ++ D H+TY++V+HFHYVL I YP G LN I
Sbjct: 389 IGGVTGVMLAMAAADYQYHNTYFLVSHFHYVLIAGTVFACFAGFIFWYPKMFGHKLNERI 448
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 177
K F+ IG NI FFPQ+FLGL G+PRR Y
Sbjct: 449 GKWFFWIFMIGFNICFFPQYFLGLQGMPRRIYTY 482
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 128 bits (309), Expect = 1e-28
Identities = 63/154 (40%), Positives = 91/154 (59%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+F G+ ++FT++++ IAVP G++IF LATI + + L +GF+ +F
Sbjct: 305 HHMFVAGLPRLGESFFTASSMAIAVPAGLQIFCWLATIWAGRPIFKTPFLFVIGFIVVFV 364
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GGLTGV++A+ D +HDTY+VVAHFHYVL +P TG ++ +
Sbjct: 365 IGGLTGVMVASVPFDTQVHDTYFVVAHFHYVLVGGAVFPLLGAIYYWFPKLTGRMMSETL 424
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 177
+ F IF G N+TFFP H LGL G+PRR Y
Sbjct: 425 GRWSFGLIFSGFNLTFFPMHILGLQGMPRRIYTY 458
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 128 bits (309), Expect = 1e-28
Identities = 58/151 (38%), Positives = 89/151 (58%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+F G++ + F T+IIAVP+ +K F + T+ I + P ++ +G V +F
Sbjct: 351 HHMFVTGMNPFLGSVFMFLTLIIAVPSAVKSFNYITTLWRGNIIFTPAMMFSIGLVSMFI 410
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
GG+TG+IL N+++DI LHDTYYVVAHFH V+ + +P G ++ +
Sbjct: 411 SGGVTGIILGNNAMDIQLHDTYYVVAHFHLVMGSASFFGMMAGVYHWFPKMFGRMMDEKL 470
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRY 186
I F+ F+G + FFP H++G+AG PRRY
Sbjct: 471 GYIHFWFTFVGAYLVFFPMHYIGIAGFPRRY 501
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 127 bits (306), Expect = 3e-28
Identities = 61/154 (39%), Positives = 86/154 (55%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+F G+D RA F + ++ IAVP+ +K F + T+ I +L +GFV F
Sbjct: 374 HHMFATGLDPRLRASFMAVSLAIAVPSAVKTFNWITTMWNGNIRLTTPMLFSVGFVANFI 433
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GG+TGV LA+ +D+ LH TYYVV HFHY++ +PL+TG +
Sbjct: 434 LGGVTGVFLASIPVDLVLHATYYVVGHFHYIVMGAIAFAGFAGIYYWFPLYTGRMYQRTL 493
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 177
K+ F+ IG NITFF LG G+PRRY+ Y
Sbjct: 494 GKMHFWLSMIGTNITFFAMILLGYGGMPRRYATY 527
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 126 bits (305), Expect = 4e-28
Identities = 59/153 (38%), Positives = 88/153 (57%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+F G++ F AT++IA+P+ +K F L T++G ++ + +L L FV +F
Sbjct: 338 HHMFVSGMNPGLGMTFMVATMMIALPSAVKTFNWLGTVYGGKVQFTTPMLFALSFVSMFV 397
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GGL+G+ +A + +DI +HDTY++VAHFHYVL +P G +N
Sbjct: 398 IGGLSGIFMAATPVDIVIHDTYFIVAHFHYVLFAGTAMAVFGSIYFWFPKMFGRMMNETA 457
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSD 180
KI F FI +N TFF H LG+ G PRR +D
Sbjct: 458 GKIHFALTFIFLNGTFFTMHILGVGGFPRRLAD 490
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 126 bits (303), Expect = 7e-28
Identities = 69/165 (41%), Positives = 92/165 (55%), Gaps = 9/165 (5%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP-NIL*RLGFVFLF 462
HH+ TVG++ DTRAYF++ TI+IA+PTG KIF L T + ++ L F+ LF
Sbjct: 3 HHMMTVGLEGDTRAYFSAMTIMIAIPTGTKIFNWLGTYMASHNTTRTIDLWAALCFILLF 62
Query: 461 TVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN-- 288
T+GG TGV++ N+ +DI LHDTYY+VAHFH+VLS + G +LN
Sbjct: 63 TLGGTTGVVMGNAGMDIALHDTYYIVAHFHFVLSLGAILATICGFVFYSKDMFGDTLNLF 122
Query: 287 ------SYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
S L I F + + F P H LG +PRR DYPD
Sbjct: 123 HVNTGSSPYLNIWFVVFLASIMLIFLPMHILGFNVMPRRIPDYPD 167
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 125 bits (302), Expect = 9e-28
Identities = 60/156 (38%), Positives = 87/156 (55%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH++ G+ +F + T+IIA+PT IK++ + T+ I+ +L LGF+ F
Sbjct: 329 HHMYVSGMYPYFGFFFATTTLIIAIPTAIKVYNWVLTLWHGDIHLTVPMLFALGFIITFV 388
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
GGLTG+ L N +D+ L DT +VVAHFH V+ + YP TG LN +
Sbjct: 389 NGGLTGLFLGNVVVDVPLSDTMFVVAHFHMVMGVAPIMVVLGAIYHWYPKVTGRMLNDVL 448
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
K F+ F+G + FFP H+LGL G+PRRY + D
Sbjct: 449 GKFHFWVTFLGAYLIFFPMHYLGLLGVPRRYFELGD 484
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 124 bits (300), Expect = 2e-27
Identities = 64/154 (41%), Positives = 88/154 (57%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+FTVG+ + F+ T+ IAVPTG+KIF L+T+ G QI + +L +GF+ FT
Sbjct: 309 HHMFTVGMGPVVNSIFSLTTMAIAVPTGVKIFNWLSTMWGGQIRFTAAMLFAIGFIASFT 368
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GGL+G + A + D HDTY+VVAHFHYVL + +P G L+ +
Sbjct: 369 IGGLSGFMHAAAPSDAQQHDTYFVVAHFHYVLIGGSIFAILSGIHHWFPKVFGRMLDERL 428
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 177
+ F IF G + FP H LGL G+PRR Y
Sbjct: 429 GRWSFALIFTGFHTFAFPFHILGLLGMPRRIYTY 462
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 122 bits (295), Expect = 6e-27
Identities = 66/158 (41%), Positives = 99/158 (62%), Gaps = 2/158 (1%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQINYNPNIL*RLGFVFLF 462
HH++T G+DIDTR+YFT+AT+IIAVPTGIKIF L++ + ++ N ++ F+ F
Sbjct: 273 HHMYTAGLDIDTRSYFTAATMIIAVPTGIKIFTWLSSLLTMKRMTLNSLTFLQVSFIVSF 332
Query: 461 TVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSY 282
+GG +G+IL+N+S+D LHDTYYVVAHFH V++ Y L + LSL
Sbjct: 333 AIGGTSGIILSNASVDHYLHDTYYVVAHFHIVVALSLVYGILVGL---YYLSSYLSLPFS 389
Query: 281 ILKIQFFTIFIGVNITFFP-QHFLGLAGIPRRYSDYPD 171
+ + ++F+ + + F QHF G + +PRRY + D
Sbjct: 390 LPLSGYASLFVFSSFSVFALQHFQGYSAMPRRYFMHSD 427
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 122 bits (293), Expect = 1e-26
Identities = 59/154 (38%), Positives = 88/154 (57%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH++ G+ R T++I++P G+ + + T++G I++ +L LGF+FLF
Sbjct: 290 HHLYVTGMPDWLRVGQMVTTVLISIPVGLMVIGLVGTLYGGSISFETPMLYALGFIFLFL 349
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GGLTGV LA S+ + L +TYYVV HFHYV++ +P TG N I
Sbjct: 350 IGGLTGVPLALVSLTVHLSETYYVVGHFHYVMAVAGTFAIFGGVYYIFPKMTGKMYNETI 409
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 177
K F+ F+GVNI F+ +G+ G+PRRY DY
Sbjct: 410 GKWAFWITFVGVNIVFWIMMDIGVEGMPRRYYDY 443
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 122 bits (293), Expect = 1e-26
Identities = 56/154 (36%), Positives = 86/154 (55%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+FT GID R+ F + ++ I++P+ +K+F + T+ ++ +L +GFV F
Sbjct: 343 HHMFTTGIDPRIRSSFMAVSLAISIPSAVKVFNWITTMWNGKLRLTAPMLFCIGFVQNFI 402
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GG+TGV LA ID+ LHDTYYVV HFH+++ +P+ TG +
Sbjct: 403 IGGVTGVFLAVIPIDLILHDTYYVVGHFHFIVYGAIGFALFAASYYWFPMVTGRMYQKRL 462
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 177
F+T +G N TF +LG G+PRRY+ Y
Sbjct: 463 AHAHFWTALVGSNATFLAMLWLGYGGMPRRYATY 496
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 121 bits (292), Expect = 1e-26
Identities = 60/157 (38%), Positives = 87/157 (55%), Gaps = 1/157 (0%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQINYNPNIL*RLGFVFLF 462
HH+FTVG+DID+R+YF+ AT II++PT +K+F + T G N + F+ F
Sbjct: 299 HHMFTVGLDIDSRSYFSIATSIISIPTSVKMFSYINTWASGRGFRGNNSSWSFFSFLICF 358
Query: 461 TVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSY 282
GG TG++L++ S+DI LHDTY+VV HFH VLS P+ S+
Sbjct: 359 CFGGFTGLLLSSGSLDIMLHDTYFVVGHFHTVLSLAATFGLLIAHYFFLPIIFSYSIFES 418
Query: 281 ILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
F + +G + F+P H GL+G+ RR +Y D
Sbjct: 419 FSFYHTFLLLVGALLVFYPMHLAGLSGMARRVPEYAD 455
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 121 bits (291), Expect = 2e-26
Identities = 58/154 (37%), Positives = 87/154 (56%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+FTVG + F T +IAVPTG+K+F + T+ G ++ + LGF+F F
Sbjct: 299 HHMFTVGESTLFQIAFAFFTALIAVPTGVKLFNIIGTLWGGKLQMKTPLYWVLGFIFNFL 358
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GG+TGV+L+ + +D HD+Y+VVAHFH VL +P TG + +
Sbjct: 359 LGGITGVMLSMTPLDYQFHDSYFVVAHFHNVLMAGSGFGAFAGLYYWWPKMTGRMYDERL 418
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 177
++ F+ +G +TF PQ+ LG G+PRRY Y
Sbjct: 419 GRLHFWLFLVGYLLTFLPQYALGYLGMPRRYYTY 452
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 119 bits (287), Expect = 6e-26
Identities = 59/155 (38%), Positives = 87/155 (56%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+F GI A+F +A+++I++P+ + +F +ATI + + L GFV +F
Sbjct: 325 HHMFATGIAPLALAFFGAASMLISIPSAVAVFAWIATIWTGRPVFRTPFLYFAGFVLMFV 384
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
VGG++GV+ A +D L DTY+VVAH HYVL +P FTG +N
Sbjct: 385 VGGVSGVMTAAVPLDWQLTDTYFVVAHLHYVLLGINVFPVLGGVAYWFPKFTGRMMNERF 444
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 174
K+ F+ + +G N+ FFP H GL G+PRR YP
Sbjct: 445 GKLTFWVVLVGFNLGFFPMHISGLLGMPRRIYTYP 479
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 119 bits (287), Expect = 6e-26
Identities = 52/86 (60%), Positives = 70/86 (81%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+FTVG+D D+RAYF+ A++IIA+PTG KIF LATI+G + + +L +GF+ LFT
Sbjct: 307 HHMFTVGLDADSRAYFSGASLIIAIPTGSKIFSWLATIYGGTLRWTTPLLYAVGFIVLFT 366
Query: 458 VGGLTGVILANSSIDITLHDTYYVVA 381
+GG+TGV++ANSS+DI HDTYYVVA
Sbjct: 367 IGGVTGVVIANSSLDIMFHDTYYVVA 392
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 117 bits (282), Expect = 2e-25
Identities = 61/155 (39%), Positives = 84/155 (54%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+F VGI + F +T+I+AVPTG+KIF + T+ G +I +GF+F F
Sbjct: 307 HHMFAVGIPEAWQIAFMISTLIVAVPTGVKIFNLIGTLWGGRILMRMPTYWLIGFIFNFL 366
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GG+TGV L D + +YYVVAHFH V+ +P TG L+ +
Sbjct: 367 IGGITGVSLGMIPFDYQVTMSYYVVAHFHNVMMFGTAFLAMAGLYYWWPKMTGRFLDEKV 426
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 174
F+ IG +TF PQ+ LGL G+PRRY YP
Sbjct: 427 GLAHFWLFMIGSWLTFLPQYILGLLGMPRRYYTYP 461
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 117 bits (282), Expect = 2e-25
Identities = 57/155 (36%), Positives = 91/155 (58%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+F G+ I + + F++A+ ++AVPTG++IF +AT+ + + LGF+F+F
Sbjct: 331 HHMFATGLPILSLSLFSAASTMVAVPTGVQIFCFIATLSQGKPRLTVPMHFILGFLFIFV 390
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GG+TGV++A ++ HD+Y+VVAH HYVL P FTG ++ +
Sbjct: 391 LGGMTGVMVAAVPFNLQAHDSYFVVAHLHYVLIGGMVFPMFGALYYWVPHFTGRMMSERL 450
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 174
K F+ +F G N+ FF H G+ G+PRR + YP
Sbjct: 451 GKWVFWLMFSGFNLAFFMMHLTGMRGMPRRVATYP 485
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 116 bits (280), Expect = 4e-25
Identities = 56/155 (36%), Positives = 89/155 (57%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+FT G+ + +F++A+ + +PTGI++F +AT+ ++ +L G + +FT
Sbjct: 331 HHMFTTGLPALSLGFFSAASEAVVIPTGIQLFAFVATLMVGRVKMILPMLWIAGGLAVFT 390
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
GGLTGV++A + D +HDTY++VAH HY L YP+ T +L+ +
Sbjct: 391 AGGLTGVMVAIAPFDWQVHDTYFIVAHLHYTLFGGMVFPIIAGVYYFYPVITKKALSERL 450
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 174
+ F+ +F G N+TF P H GL G+PRR YP
Sbjct: 451 GRWSFWLLFTGFNVTFLPMHLTGLKGMPRRVFTYP 485
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 116 bits (279), Expect = 5e-25
Identities = 52/83 (62%), Positives = 67/83 (80%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH++ VG+D+DTRAYFT+AT+IIAVPTGIKIF LAT++G + +L LGF+ LFT
Sbjct: 289 HHMYAVGLDVDTRAYFTAATMIIAVPTGIKIFSWLATLYGGSLRITTPMLFALGFIALFT 348
Query: 458 VGGLTGVILANSSIDITLHDTYY 390
+GGLTGVILAN+S+D+ LHD Y
Sbjct: 349 IGGLTGVILANASLDVALHDLKY 371
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 116 bits (278), Expect = 7e-25
Identities = 56/156 (35%), Positives = 89/156 (57%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+F G + +F+ T +I+VPTG+K F + T+ I + ++ +GF+ F
Sbjct: 314 HHMFVTGAVL--LPFFSFMTFLISVPTGVKFFNWVGTMWKGHITWETPMIWSVGFMATFL 371
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
GGLTG++LA+ +D L D+Y+++AHFHY L +P TG ++ +
Sbjct: 372 FGGLTGIMLASPPLDFHLADSYFLIAHFHYTLFGTVVFASCAGVYFWFPKMTGRMMDERL 431
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
KI F+ F+G + TF QH++G G+PRRY+DY D
Sbjct: 432 GKIHFWLTFVGFHGTFLIQHWVGNMGMPRRYADYLD 467
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 114 bits (274), Expect = 2e-24
Identities = 57/156 (36%), Positives = 84/156 (53%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+F G++ + F+ T+II +P + L +++G+++ N L LGF+ +F
Sbjct: 337 HHMFVSGMNPLSSLVFSFPTLIITIPATVLTLIWLGSLYGSRLRINSASLFALGFISMFV 396
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
GG++G LA SIDI LH TY+VV HFH V+ +P TG +N +
Sbjct: 397 SGGVSGFFLAQPSIDIYLHATYFVVGHFHLVMGVAAIFGVFAGTYFWFPKMTGHMMNETL 456
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
KI F+ FIG F P H+LG+ G RRYS + D
Sbjct: 457 GKIHFWGTFIGAYCIFMPFHYLGMVGNVRRYSSFVD 492
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 113 bits (272), Expect = 4e-24
Identities = 60/158 (37%), Positives = 90/158 (56%), Gaps = 4/158 (2%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI----L*RLGFV 471
HH+FT GI + ++F +A+ +A+P+G+++F +AT + I L LGF+
Sbjct: 374 HHMFTTGIPQLSLSFFQAASTAVAIPSGMQVFAWIATFARGRATGRVRIATPTLFILGFL 433
Query: 470 FLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSL 291
F+F +GGLTGV++A D HD+Y++VAH HYVL P + +L
Sbjct: 434 FIFVLGGLTGVMVAVIPFDWQAHDSYFIVAHLHYVLVGGMVFPLFAAFYYWMPYTSRQAL 493
Query: 290 NSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 177
+ + + F +F+G NITFFP HF GLAG+PRR Y
Sbjct: 494 SERLGRWVFGLMFVGFNITFFPMHFTGLAGMPRRVYTY 531
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 113 bits (272), Expect = 4e-24
Identities = 57/154 (37%), Positives = 83/154 (53%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+F G R F T++IA+PTG+K+F L T+ + N +L +G + F
Sbjct: 315 HHMFYTGTPNWMRHIFMFTTMLIAIPTGVKVFAWLGTLWAGNLRLNTPMLFCIGGLINFI 374
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
G+TGV+LA IDI + +TY+VVAHFHYV+ + +P FTG +
Sbjct: 375 FAGITGVMLATVPIDIHVGNTYFVVAHFHYVIFNTIVFGVFAGIYHWFPKFTGKMYYEGL 434
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 177
K+ F FIG + + P H+ GL G+PRR + Y
Sbjct: 435 GKVHFVLTFIGATLNWLPLHWAGLLGMPRRVASY 468
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 110 bits (265), Expect = 3e-23
Identities = 50/80 (62%), Positives = 64/80 (80%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH++ VG+D DTRAYFTSAT+IIA+PTGIKIF LATI+G I ++ + F+FLFT
Sbjct: 290 HHMYIVGLDADTRAYFTSATMIIAIPTGIKIFSWLATIYGGSIRLAVPMMFAIAFLFLFT 349
Query: 458 VGGLTGVILANSSIDITLHD 399
VGGLTGV+LAN+S+D+ HD
Sbjct: 350 VGGLTGVVLANASLDVAFHD 369
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 110 bits (264), Expect = 4e-23
Identities = 56/157 (35%), Positives = 86/157 (54%), Gaps = 2/157 (1%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH FT+G + A+F AT+II++PTG+K+F L TI+ ++ + IL LGF+ F+
Sbjct: 334 HHFFTMGSGANVNAFFGIATMIISIPTGVKLFNWLFTIYKGRLRFETPILWTLGFMVTFS 393
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GG+TGV+LA D LH++ +++AHFH + +P G LN +
Sbjct: 394 IGGMTGVLLAVPGADYVLHNSLFLIAHFHNTIIGGAVFGYLAGVSFWFPKVFGFKLNDKL 453
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRR--YSDYP 174
K F+ IG F P + LG G+ RR ++D P
Sbjct: 454 GKASFWFWQIGFMFAFMPLYVLGFLGMTRRLNHTDNP 490
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 109 bits (262), Expect = 6e-23
Identities = 55/157 (35%), Positives = 85/157 (54%), Gaps = 2/157 (1%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH FT+G +F AT++I++PTG+K+F L TI+ ++ + I+ LGF+ F+
Sbjct: 333 HHFFTMGAGASVNTFFGLATMLISIPTGVKLFNWLFTIYQGRLRFTAPIMWTLGFMITFS 392
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GG+TGV+LA D LH++ +V+AHFH V+ +P G +LN
Sbjct: 393 IGGMTGVLLAVPGADFVLHNSLFVIAHFHNVIIGGAVFGYIAGFAYWFPKAFGFTLNEKW 452
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRR--YSDYP 174
K F+ G + F P + LG G+ RR +SD P
Sbjct: 453 GKAAFWFWISGFYVAFMPLYALGFMGMTRRLNHSDNP 489
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 105 bits (253), Expect = 8e-22
Identities = 59/144 (40%), Positives = 81/144 (56%), Gaps = 2/144 (1%)
Frame = -2
Query: 596 YFTSATIIIAVPTGIKIFR*LATIHGTQ-INYNPNIL*RLGFVFLFTVGGLTGVILANSS 420
YFT+ TI+IA+PTG KIF + T+ + I +L + F+ F +GG TGV+L N+
Sbjct: 309 YFTTVTILIALPTGNKIFNWVTTLQCVESIKSLGLVLFTVLFIVNFVIGGTTGVVLGNAG 368
Query: 419 IDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*Y-PLFTGLSLNSYILKIQFFTIFIGV 243
ID+ LHDT YVV HFH+VLS I L G+ L++ + + I V
Sbjct: 369 IDLALHDTVYVVGHFHFVLSIGAIISMICFIIYIQRMLLFGIILSNRLSSLIAPIFMISV 428
Query: 242 NITFFPQHFLGLAGIPRRYSDYPD 171
+TF P HF G + +PRR DYPD
Sbjct: 429 LLTFLPMHFTGFSPLPRRIPDYPD 452
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 105 bits (251), Expect = 1e-21
Identities = 52/156 (33%), Positives = 76/156 (48%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+FT G F ++ + + T IK+F AT++ I + GF+F
Sbjct: 308 HHMFTSGQSAFNGGVFGVLSMFVGIFTAIKVFNWTATLYKGSIYFATPFAYFAGFLFFLV 367
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
GG+TG+ LA S+D+ HDTY++VAHFH+++ +P G L
Sbjct: 368 FGGMTGIALATVSLDVHWHDTYFIVAHFHFIMVGATVMAFLAALHYWFPKIAGKRLPEGW 427
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
+ I +G N TF PQ LG G+PRRY YP+
Sbjct: 428 GLVAAVMIILGFNFTFIPQFLLGNEGMPRRYFSYPE 463
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 104 bits (250), Expect = 2e-21
Identities = 51/156 (32%), Positives = 77/156 (49%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+F G F T+I+ V T IK+F + T++ + + GF+F
Sbjct: 315 HHMFVSGQSTFAGGLFGVLTMIVGVFTAIKVFNWVGTVYKGAVEFKTPFAYFCGFLFFTV 374
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
GG+TG+ L S+D+ HDTY+VVAHFH+++ +P G + +
Sbjct: 375 FGGMTGIALGTVSLDVAWHDTYFVVAHFHFIMVGATIMAFLAALHYWFPKMFGRTYHEGW 434
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
+ I +G N TF PQ LG G+PRRY +YP+
Sbjct: 435 GLVAAALIILGFNATFIPQFLLGNNGMPRRYYEYPE 470
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 103 bits (247), Expect = 4e-21
Identities = 52/155 (33%), Positives = 83/155 (53%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+FT D R AT+ +A+P+G+K+F +AT++G +I +L L F+ F
Sbjct: 299 HHMFTAVQDFAPRVAMAIATMAVAIPSGVKVFNWVATLYGGRIQLKAPMLFMLTFLLFFI 358
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
VGG+TGV ++D+ LHDTY+V+ HFHY+++ +P TG + +
Sbjct: 359 VGGVTGVFFPVITLDLHLHDTYFVLGHFHYIVNAIAFGVFGALLYY-FPHLTGRWYDERL 417
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 174
+I + I +G T+ G+ G PRRY+ P
Sbjct: 418 ARISWALITVGGFATYTLMSAAGVLGSPRRYAAAP 452
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 102 bits (244), Expect = 1e-20
Identities = 50/155 (32%), Positives = 76/155 (49%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+F G+ + F T+ + + +F +AT+ +I ++ ++ +G + LF
Sbjct: 291 HHMFATGMSFTEKTVFMLGTLAAVPASAMHVFNFVATMWNGRIRFDSPMMWSIGGIALFF 350
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
G GV+ A +D T HDTY+VV HFH + +P TG N +
Sbjct: 351 SAGAGGVLNAAMPLDFTTHDTYWVVGHFHLFVMGTIAFGSIGFFYYMFPFVTGRMYNEKL 410
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 174
KI F F+G + FF QH LG+ G+PRR DYP
Sbjct: 411 GKIHFVFSFVGAVLLFFTQHILGIYGMPRRVYDYP 445
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 101 bits (242), Expect = 2e-20
Identities = 52/154 (33%), Positives = 84/154 (54%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH FT+G A F A+++I +PTG+KI+ + T+ +I ++ ++ L F+FLF
Sbjct: 353 HHFFTMGQSGHINAVFGIASMLIGIPTGVKIYDWMWTMLRGRIRFSVPMIYSLAFIFLFV 412
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GG+TG++LAN +D +H+T ++VAHFH ++ +P G L+
Sbjct: 413 IGGITGIMLANPILDYQVHNTVFLVAHFHNMVVPGVLFGMLAGYTFWFPKAFGFRLDERW 472
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 177
+I + G FFP + LGL G+PRR Y
Sbjct: 473 GRISAYCWIFGWMGAFFPLYILGLMGLPRRSVAY 506
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 99 bits (238), Expect = 5e-20
Identities = 51/154 (33%), Positives = 86/154 (55%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH FT+G +F++AT+++ +PTG+K+F T+ ++ + P +L LG +FL
Sbjct: 352 HHFFTMGAGPGINIFFSTATMLVGIPTGVKVFNWALTLWRGRLRFEPPMLWALGALFLLL 411
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
VGGLTG++LA +I+ T+H++ +VVAHFH ++ +P G L++
Sbjct: 412 VGGLTGMMLAIPAINYTVHNSVFVVAHFHCMMLLIAYAIFGAIIF-WFPKLFGFHLDAPS 470
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 177
+ F++ +G + F LGL G+ RR DY
Sbjct: 471 ARANFWSFSVGTVLVFGAMFALGLMGMTRRL-DY 503
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 99.5 bits (237), Expect = 7e-20
Identities = 48/155 (30%), Positives = 83/155 (53%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH++ VG+D +R +++ TI+I++P IK+ ++ + + L + F+ LF
Sbjct: 450 HHMYLVGLDHRSRTMYSTITIMISMPATIKVVNWTLSLVNGALKVDLPFLFSMSFLLLFL 509
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
V G TG+ L++ S+++++HDT+YVVAHFH +LS + G+ +
Sbjct: 510 VAGFTGMWLSHVSLNVSMHDTFYVVAHFHIMLSGAAITGIFSGFYYYFNALFGIKFSRMF 569
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 174
+ G + F PQ +LG +G+PRR DYP
Sbjct: 570 GYMHLIYYSGGQWVAFVPQFYLGFSGMPRRIHDYP 604
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 99.1 bits (236), Expect = 9e-20
Identities = 52/154 (33%), Positives = 82/154 (53%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+F G +I TR +++ TI+I++P + + + T++ ++ Y +L +G + F
Sbjct: 297 HHMFITGTNIYTRLFYSITTILISIPFEMAVMSFIFTLYKGRLVYTVPMLFAVGALLNFI 356
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GG TGV L + +ID TY+VVAHFHY+L +P TG + + +
Sbjct: 357 IGGSTGVYLGSIAIDRGFRGTYWVVAHFHYILVGTVTLGLIAGLYYWWPKITGRTYSERL 416
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 177
KI F +GV +TF PQ L +PRRY Y
Sbjct: 417 GKIHFALAMLGVALTFLPQ--FALMDMPRRYFTY 448
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 98.3 bits (234), Expect = 2e-19
Identities = 54/156 (34%), Positives = 80/156 (51%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+F GI++ + F + TI I++P + +F + T+ ++ + L LG + LF
Sbjct: 311 HHMFLTGINLPIKTIFMATTIGISLPFDLMVFSLIYTMAKGRVRFTTPFLFSLGALILFI 370
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GG+TGV L +D TY+VVAHFHYV+ YP TG N +
Sbjct: 371 IGGITGVFLGAIVLDYQFRGTYWVVAHFHYVM-VAGATALFGGLYYWYPKITGKMYNETL 429
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
KIQF F+G N+ +FP F+ PRR YP+
Sbjct: 430 GKIQFGVYFLGFNLLYFPM-FIAWE-TPRRVFVYPE 463
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 97.1 bits (231), Expect = 4e-19
Identities = 54/157 (34%), Positives = 87/157 (55%), Gaps = 3/157 (1%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH FT+G + +F+ +T+IIA+PTG+KIF + TI + + + F+ +F+
Sbjct: 328 HHFFTMGSGYLSNIFFSISTMIIAIPTGVKIFNWIFTILFSNFKKDILFFWFISFIIIFS 387
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPL-FTGLSLNSY 282
+GG +GVIL+ ++D H++ +++AHFH V+ Y L + LN+
Sbjct: 388 IGGFSGVILSIPNLDFIFHNSMFLIAHFHSVIIGGVLFGYLSGISLWYNLIYNNCELNN- 446
Query: 281 ILKIQFFTIF--IGVNITFFPQHFLGLAGIPRRYSDY 177
K F +F IGV +TFFP +FLG G+ RR + Y
Sbjct: 447 --KFNFNILFWLIGVILTFFPFYFLGYCGMIRRINIY 481
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 97.1 bits (231), Expect = 4e-19
Identities = 45/55 (81%), Positives = 50/55 (90%)
Frame = -2
Query: 614 DIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGG 450
D+DTRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY P++L LGFVFLFTVGG
Sbjct: 1 DVDTRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYTPSLLWALGFVFLFTVGG 55
Score = 45.2 bits (102), Expect = 0.002
Identities = 35/87 (40%), Positives = 42/87 (48%)
Frame = -3
Query: 274 KFNFLQYLLE*I*HFFHNIF*V*LEYLDDIQIIQTHIFHEI*FLH*VHIFLYYQ***Y*L 95
KFN Y LE I HF HNIF EYLDDIQI + E+ + +L + L
Sbjct: 115 KFNLQLYFLELILHFSHNIFLDLPEYLDDIQIFLMDLIVEMLYQDLDLYYLLLELSISYL 174
Query: 94 LSENQ*LTNELTYFL*ISHHQLNDIKI 14
L E + + YFL H LND KI
Sbjct: 175 LFEKELSQIDQFYFLLNYRHLLNDTKI 201
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 96.3 bits (229), Expect = 6e-19
Identities = 53/154 (34%), Positives = 80/154 (51%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+FT GI A+F++A+ ++AVPT +++F + T+ + +L L F F
Sbjct: 305 HHMFTTGIPHLGLAFFSAASTLVAVPTAVQLFIWIGTLAKGAPRLHLPMLWLLAFFATFV 364
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GGLTGV++A D +HDTY++VAH HYVL P FTG +
Sbjct: 365 IGGLTGVMVAIVPFDWQVHDTYFIVAHLHYVLIGGFVFPMLAALYYWLPHFTGRKTYFNL 424
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 177
F+ + IG + TF H+ GL G+ RR +
Sbjct: 425 GPTAFWLVVIGFHGTFLLLHWAGLLGMRRRIDSF 458
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 95.1 bits (226), Expect = 1e-18
Identities = 50/153 (32%), Positives = 79/153 (51%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+F G+ F T++I++P+ + + + T+ + Y+ +L LG VF+F
Sbjct: 327 HHMFMTGMSPLLGEGFMLFTLLISIPSMVVVVNWVLTLWQGSLRYDTPMLFALGTVFVFG 386
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
VGGLTG+ L + S+D+ LHDT +VV HFH+ ++ +P G L +
Sbjct: 387 VGGLTGLFLGDISMDLYLHDTMFVVGHFHFTMAAASVMGAFTGIYFWFPKMFGRRLGERL 446
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSD 180
KI F+ F+G+ + F Q G AG RR D
Sbjct: 447 GKIHFWFTFLGLTLVFGGQLLAGYAGQERRLFD 479
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 95.1 bits (226), Expect = 1e-18
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = -2
Query: 596 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 435
YFTSAT+IIAVPTGIKIF LAT HGTQINY+P+IL LGFVFLFTVGGLTGVI
Sbjct: 97 YFTSATMIIAVPTGIKIFSWLATFHGTQINYSPSILWSLGFVFLFTVGGLTGVI 150
Score = 45.2 bits (102), Expect = 0.002
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -1
Query: 690 NNLCYTSNWVIRIYCLSSSYIH 625
+NLCY SNW+I IYCLSSSYI+
Sbjct: 66 DNLCYISNWIISIYCLSSSYIY 87
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 92.3 bits (219), Expect = 1e-17
Identities = 53/155 (34%), Positives = 81/155 (52%), Gaps = 1/155 (0%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATI-HGTQINYNPNIL*RLGFVFLF 462
HH+FT GI A F++A+ ++AVPT +++F + T+ GT P ++ L F F
Sbjct: 305 HHMFTTGIPHMGLALFSAASTLVAVPTAVQLFAWIGTLWRGTPEMRLP-MMWILAFFATF 363
Query: 461 TVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSY 282
+GGLTGV++A D +HDT+++VAH HYVL P TG
Sbjct: 364 VIGGLTGVMVAVVPFDWQVHDTHFIVAHLHYVLVGGFVFPMLAALYYWMPHVTGRKRFFR 423
Query: 281 ILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 177
+ + F+ + +G + TF H++GL G RR Y
Sbjct: 424 VGDVAFWLVTVGFHATFLAVHWVGLLGQRRRTETY 458
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 89.8 bits (213), Expect = 5e-17
Identities = 46/155 (29%), Positives = 78/155 (50%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH+FT + + ++ T+ IA+P+G+K+ AT++G +I Y + + F+ +F
Sbjct: 288 HHMFTAIDNTLVQIVSSATTMAIAIPSGVKVLNWTATLYGGEIRYKTPTILLISFIVMFL 347
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GG+TGV ID L+ TY+VV HFHY++ +P ++G N +
Sbjct: 348 LGGITGVFFPLVPIDYALNGTYFVVGHFHYMVYAILYALLGALFYY-FPFWSGKWYNDDL 406
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 174
K + G +T G+ G+PRRY+ P
Sbjct: 407 GKTGAILLVAGTFLTATGMSIAGILGMPRRYAVIP 441
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 86.6 bits (205), Expect = 5e-16
Identities = 50/154 (32%), Positives = 73/154 (47%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH FT D + T T +++PTG + TI G ++ N +L L + F
Sbjct: 382 HHYFTAVSDARMPIFMT-ITETVSIPTGFIYLSAIGTIWGGRLRINAAVLLVLMAMMNFL 440
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GGLTG+ A+ D+ LH+TY+V+AHFH +P TG +N +
Sbjct: 441 IGGLTGIFNADVPADLQLHNTYWVIAHFHIRCFGGVIFTWIAALYWWFPKVTGRKINEFW 500
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 177
K + F+ N TFFP GL G+ RR + Y
Sbjct: 501 GKFHAWWSFVFFNCTFFPMFIAGLDGMNRRIAIY 534
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 81.4 bits (192), Expect = 2e-14
Identities = 50/115 (43%), Positives = 57/115 (49%)
Frame = -2
Query: 596 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 417
Y SA P G+K F + + G P I F GGLTGVILANSS
Sbjct: 223 YLXSAXXFXXGPPGVK-FLGDSYLSGNFNFXKPQIFMIFSIYFSIHGGGLTGVILANSSX 281
Query: 416 DITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILKIQFFTIF 252
DI LHDTYYVVAH HYVLS + +PLFTGL+L I F I+
Sbjct: 282 DIILHDTYYVVAHXHYVLSMGAVFAILAGIVQWFPLFTGLTLTMNIKNTIFSYIY 336
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = -1
Query: 276 KNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLIYFMK 154
KN+IF IYWSK+NIFS+T S NT+T+F LS ++FMK
Sbjct: 328 KNTIFSYIYWSKFNIFSSTLCSISSNTTTLFWLSSCLHFMK 368
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 81.0 bits (191), Expect = 3e-14
Identities = 50/154 (32%), Positives = 74/154 (48%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH F GI + T I++PT + I +AT+ G + + IL L F
Sbjct: 318 HHTFMTGIVFAWLMADSIFTETISIPTSMLIVGLIATMIGGRHKFQTPILFALAASTSFM 377
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
+GG++GV ++ +ID +H YYVVAHFHY + +P FTG + +
Sbjct: 378 IGGVSGVTQSSLAIDTIVHGDYYVVAHFHYFMVGVAVMGLMGNLYYYFPKFTGRMYSEKL 437
Query: 278 LKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 177
+I + + GVNI +FP F L +PRR Y
Sbjct: 438 GRIHWAFAYPGVNILYFPMFF--LYDLPRRVYTY 469
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 77.0 bits (181), Expect = 4e-13
Identities = 50/131 (38%), Positives = 62/131 (47%)
Frame = -1
Query: 546 F*MTSYNTWNSN*L*P*YFMKIRFCIFIHSRRINRCNFSQFFXXXXXXXYXXXXXXXXXX 367
F MT Y +W++N L P + FC FI+ N +FSQF Y
Sbjct: 24 FLMTCYPSWDTNLLHPSPPLSFSFCFFIYRWSFNSGSFSQFLNWYYSTWYLLCCSSFPLR 83
Query: 366 XXXXXXICNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTI 187
ICNY IY L+ + F K KNSI+ NIY SK NIFS TFF +T +
Sbjct: 84 SFNSSSICNYISIYPLMPPLNWTFYKSKMIKNSIYNNIYSSKSNIFSPTFFSACRDTPPL 143
Query: 186 FRLSRLIYFMK 154
F SRLI +K
Sbjct: 144 FWFSRLILLLK 154
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 69.3 bits (162), Expect = 8e-11
Identities = 28/35 (80%), Positives = 32/35 (91%)
Frame = -2
Query: 275 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
KI F +F+GVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 400 KIHFGVMFVGVNLTFFPQHFLGLAGMPRRYSDYPD 434
>UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 541
Score = 69.3 bits (162), Expect = 8e-11
Identities = 38/115 (33%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
Frame = -2
Query: 503 NPNIL*RLGFVFLFT-VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXX 327
NP +L L F F+ GG G+I + +D T+H+T ++ HFH + +
Sbjct: 325 NPQML-ALAFSFVMLGFGGAGGLINMSYQLDTTIHNTQWITGHFHLIFAGAIVTMYFAIA 383
Query: 326 IN*YPLFTGLSLNSY-ILKIQFFTIFIGVNITFFPQHFLGLAGIPRR--YSDYPD 171
+ +P TG +L +++ Q + FIG+ +T FP H++G+ G+PRR Y DY D
Sbjct: 384 YDLWPHLTGRALTHVRLMRWQLWLWFIGMIVTTFPWHWVGILGMPRRMAYYDYGD 438
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 68.9 bits (161), Expect = 1e-10
Identities = 46/124 (37%), Positives = 53/124 (42%)
Frame = -1
Query: 525 TWNSN*L*P*YFMKIRFCIFIHSRRINRCNFSQFFXXXXXXXYXXXXXXXXXXXXXXXXI 346
TWNSN +M I CIFIH + F
Sbjct: 31 TWNSNLFFSITYMGISICIFIHLLEDLQELFLLILLLMLFYMTLIMLCSFSLCFIYSSCF 90
Query: 345 CNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLI 166
CNY GIY L+ I K L KNSIFYNI+ K IFSTTFF S +T T+ S LI
Sbjct: 91 CNYIGIYSLMPLINSTNNKSLMIKNSIFYNIFSGKSYIFSTTFFSISSDTPTMLSFSSLI 150
Query: 165 YFMK 154
+K
Sbjct: 151 QLLK 154
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = -2
Query: 611 IDTRAYFTSATIIIAVPTGIKIFR*LAT 528
+DTRAYFTSAT+IIAVPTGIKIF LAT
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIFSWLAT 29
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 62.5 bits (145), Expect = 9e-09
Identities = 29/48 (60%), Positives = 34/48 (70%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 495
HH++ VG+D DTRAYFTSAT+IIA+PTGIKIF L N N N
Sbjct: 290 HHMYIVGLDADTRAYFTSATMIIAIPTGIKIFSWLMNPFSKDKNKNKN 337
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 61.7 bits (143), Expect = 2e-08
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL-*RLGFVFLF 462
HH+F VG D+ T +F+S T+II VPTGIK+F L + ++ N I+ +GF+FLF
Sbjct: 30 HHMFMVGFDVKTAVFFSSVTMIIGVPTGIKVFGWLYMLGTSRHCLNTVIVWWIIGFIFLF 89
Query: 461 TVGGLTG 441
T+GG G
Sbjct: 90 TMGGRQG 96
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 59.3 bits (137), Expect = 9e-08
Identities = 75/224 (33%), Positives = 79/224 (35%)
Frame = -3
Query: 685 FMLY*QLGY*DLLFEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKFLDD*LQYMELKLI 506
FM L Y DLLFE LKFL D +MELKLI
Sbjct: 271 FMQSWLLVYSDLLFELIMYLPSESMLKLELVLHQQLSLLLSQLGLKFLVDWQPFMELKLI 330
Query: 505 ITLIFYED*VLYFYSQ*ED*QV*F*PXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 326
+ L FYED L FY Q ED F
Sbjct: 331 MVLQFYEDWDLCFYLQSEDSLELFSLIHPLMLLYMMHIMLSHISIMFFPSGQYLLLSADL 390
Query: 325 XXXXXXXQAFH*ILIY*KFNFLQYLLE*I*HFFHNIF*V*LEYLDDIQIIQTHIFHEI*F 146
+ I Y KFNFL Y E I F NIF LEYLDDI IIQ EI F
Sbjct: 391 FIDTLYLLDYLSIHSYSKFNFLLYSSELISLFSLNIFSGSLEYLDDILIIQILTSLEISF 450
Query: 145 LH*VHIFLYYQ***Y*LLSENQ*LTNELTYFL*ISHHQLNDIKI 14
H F Y LL ENQ EL Y + LND KI
Sbjct: 451 HHSDLTFHCLPSYSYSLLFENQSFITELLYLPSMYLLLLNDTKI 494
>UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1;
Methylococcus capsulatus|Rep: Cytochrome c oxidase,
subunit I - Methylococcus capsulatus
Length = 537
Score = 58.0 bits (134), Expect = 2e-07
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Frame = -2
Query: 503 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXI 324
NP +L + + + +GG G++ A+ +++ +H+T +V HFH + +
Sbjct: 327 NPMVLAAILSLLMLVLGGFGGIVNASYAMNAMVHNTAWVPGHFHLIFAGTVITMYLAVAY 386
Query: 323 N*YPLFTGLSLNSYILK-IQFFTIFIGVNITFFPQHFLGLAGIPRRYS 183
+P G L S L +Q + FIG+ I P H LGL G PRR S
Sbjct: 387 KLWPELCGRRLYSVDLALVQLWGWFIGMVIMTTPWHILGLLGQPRRIS 434
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 56.8 bits (131), Expect = 5e-07
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 489
HH+FTVG+D++T +F+S T+II VPTGIK+F L + +++N IL
Sbjct: 53 HHMFTVGLDVNTAVFFSSVTMIIRVPTGIKVFTWLYMLSNSRVNKXDPIL 102
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/30 (76%), Positives = 29/30 (96%)
Frame = -2
Query: 632 IFTVGIDIDTRAYFTSATIIIAVPTGIKIF 543
++ VG+D+DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVPTGIKIF 30
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 54.8 bits (126), Expect = 2e-06
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL-- 465
HH+ T + +D RA+ T +T+++A +G+ + TI T Y+ LG FL
Sbjct: 54 HHLQTFPLPVDLRAWITVSTLVLASGSGLTVLNLGLTIL-TSKGYDYKD--PLGMTFLIA 110
Query: 464 ---FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 363
F +GG+ + L + I+ +H+TYYVV HFHY++
Sbjct: 111 LIGFIIGGVQALPLPINIINGVVHNTYYVVGHFHYMV 147
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 52.8 bits (121), Expect = 8e-06
Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 1/96 (1%)
Frame = -2
Query: 473 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLS 294
+ LF GG G+I A+ +I++ +H+T ++ HFH + P TG
Sbjct: 359 MILFAFGGAGGLINASYNINLVVHNTSWISGHFHLTVGTAVTLSFMGITYWLVPHLTGRR 418
Query: 293 LNSYILK-IQFFTIFIGVNITFFPQHFLGLAGIPRR 189
L S + +Q +T F+G+ I H LGL +PRR
Sbjct: 419 LWSPTMALVQAWTWFVGMGIFSHWMHMLGLLSMPRR 454
>UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8;
Bacillaceae|Rep: Cytochrome c oxidase subunit I -
Bacillus halodurans
Length = 564
Score = 50.0 bits (114), Expect = 5e-05
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Frame = -2
Query: 473 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLS 294
+ F GG+ G+I A+ ++ +H+T +VV HFH + P TG
Sbjct: 353 MLFFIPGGIGGIINASFQLNEVVHNTLWVVGHFHITVGAPVAMTFYGLTFWLVPYLTGRP 412
Query: 293 LNSYILK---IQFFTIFIGVNITFFPQHFLGLAGIPRR 189
+ K IQ T +G+ + QH LGL G PRR
Sbjct: 413 FSRLAKKLALIQVITWSLGMFLMSTAQHVLGLLGAPRR 450
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 49.2 bits (112), Expect = 9e-05
Identities = 19/40 (47%), Positives = 28/40 (70%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHG 519
HH+F VG D+ T +F+S T++I +PTGIK+F L + G
Sbjct: 54 HHMFMVGYDVHTAVFFSSVTMVIGIPTGIKVFSWLIMLGG 93
>UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxidase;
n=6; cellular organisms|Rep: Subunit I-homologue of
cytochrome oxidase - Natronomonas pharaonis
(Natronobacterium pharaonis)
Length = 581
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 1/97 (1%)
Frame = -2
Query: 467 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSL- 291
+F +G++ A +I+ +H+T++VV HFH + P TG L
Sbjct: 350 MFAAAAFSGMVNAGMNINYLVHNTWWVVGHFHLTVGTAVALTFMAVSYWFLPQITGKKLW 409
Query: 290 NSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSD 180
+ Q F+G+ H GLAG+PRR ++
Sbjct: 410 GKSVALAQVVLWFVGMTFMSNAMHRSGLAGMPRRTAE 446
>UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal
oxidase; n=8; Sulfolobaceae|Rep: Heme bearing subunit I
of the terminal oxidase - Sulfolobus solfataricus
Length = 593
Score = 48.4 bits (110), Expect = 2e-04
Identities = 39/159 (24%), Positives = 65/159 (40%), Gaps = 4/159 (2%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFT 459
HH++ V + I + T + +P+ + F AT G + +N +
Sbjct: 297 HHLYMVNLPIALKLLQEVLTYSVVIPSMMTFFNLWATAKGADVKWNIITAWTVTSFAGAI 356
Query: 458 VGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYI 279
G+TG+ A S D +H+T +VV HFH ++ Y + T +S +
Sbjct: 357 AAGVTGISNATISFDAIVHNTDWVVGHFHAMILFSIVPAAWAVL---YIMITMMSGRIWF 413
Query: 278 LKIQFFTIFIG--VNITFFPQHF--LGLAGIPRRYSDYP 174
K + +IG + TF F +G G+ RR YP
Sbjct: 414 SKGMAWLHYIGYMIGTTFLIVGFELIGFYGVVRRAEIYP 452
>UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1;
Caldivirga maquilingensis IC-167|Rep: Cytochrome-c
oxidase precursor - Caldivirga maquilingensis IC-167
Length = 529
Score = 47.2 bits (107), Expect = 4e-04
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 3/155 (1%)
Frame = -2
Query: 638 HHIFTVGID-IDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLF 462
HH++ + + +T+ I++ + + +F LA + + I P + L +F +
Sbjct: 313 HHLYLYPFEPLPVNLMSQLSTMGISIVSAVSVFALLAMMWRSGIKMTPPYMFSLIAMFAW 372
Query: 461 TVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YP-LFTGLSLNS 285
G +GV A + ++ LH+T +VVAHFH + P + ++L
Sbjct: 373 LEAGYSGVAQAIVAWNLYLHNTLWVVAHFHTMALLNIAMVAIALIYYLVPKAYPWVNLYD 432
Query: 284 YILKIQFFTIFIGVNITFFPQHFL-GLAGIPRRYS 183
K+ F+ +G F F G+ G+PRRY+
Sbjct: 433 KWSKVHFWMTLVG-GFGFVNTWFAEGVLGVPRRYA 466
>UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Cytochrome-c oxidase -
Halorubrum lacusprofundi ATCC 49239
Length = 597
Score = 46.8 bits (106), Expect = 5e-04
Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = -2
Query: 467 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLN 288
+F GG +G++ A +I+ +H+T +V HFH + +P T +
Sbjct: 358 MFAAGGFSGMVNAGMNINYMIHNTIWVPGHFHLTVGTAVALTFMAATYWIWPQITNKPIY 417
Query: 287 SYILKI-QFFTIFIGVNITFFPQHFLGLAGIPRRYSD 180
S + + Q FIG+ + H G+ G PRR ++
Sbjct: 418 SRSIGLFQVVLWFIGMALMSNAMHAQGILGAPRRTAE 454
>UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3;
Pyrobaculum|Rep: Cytochrome C oxidase subunit I -
Pyrobaculum aerophilum
Length = 557
Score = 46.0 bits (104), Expect = 9e-04
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
Frame = -2
Query: 473 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLS 294
+ LF + G +GV+ A+ +++ +H+T +VV HFH + PL G
Sbjct: 340 IILFGIAGFSGVVNASFNVNYNVHNTAWVVGHFHLTVGGGVTLTFIATSFLLVPLLFGRD 399
Query: 293 LNSYILKIQFFTI-FIGVNITFFPQHFLGLAGIPRR 189
+ L I T+ F+G I H GL PRR
Sbjct: 400 YVAKKLLIAVPTLWFVGQLIFGIGYHVAGLLHAPRR 435
>UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1;
Jannaschia sp. CCS1|Rep: Cytochrome c oxidase subunit I
- Jannaschia sp. (strain CCS1)
Length = 155
Score = 45.2 bits (102), Expect = 0.002
Identities = 29/92 (31%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Frame = -2
Query: 440 VILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNSYILK--IQ 267
+ L+ D T HDTYYVVAH HY+ Y L S+ + +
Sbjct: 29 IALSQPGADGTYHDTYYVVAHIHYL---GLLALLVVAVGTAYVLLLRRSVPRIAVSGAVA 85
Query: 266 FFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 171
+ +G PQ L G+PRRY+DY D
Sbjct: 86 ICMLCLGTAFMVAPQAVLPGGGMPRRYTDYAD 117
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 44.4 bits (100), Expect = 0.003
Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Frame = -2
Query: 638 HHIFTVGIDIDTRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN---PNIL*RLGFVF 468
HH+ T + I R + +T+I+A +G+ + TI T Y+ P + L +
Sbjct: 284 HHLQTWPLPIVLREWVNLSTLILATGSGLTVLNLGLTIF-TSRKYDWKDPVGMGALISLI 342
Query: 467 LFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVL 363
F + G ++L +SI+ H++YYVV HFH ++
Sbjct: 343 GFILAGAQALVLPENSINPLFHNSYYVVGHFHLMI 377
>UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1;
Clonorchis sinensis|Rep: Cytochrome oxidase subunit 1 -
Clonorchis sinensis
Length = 120
Score = 42.7 bits (96), Expect = 0.008
Identities = 23/44 (52%), Positives = 29/44 (65%)
Frame = +1
Query: 517 VPCIVASHLKILIPVGTAIIIVAEVKYARVSISIPTVNI**AQT 648
VP + +H K LIPVGT +I+V E+K V S PTVN+ AQT
Sbjct: 51 VPASMYNHEKTLIPVGTPMIMVTELKKTAVPKSSPTVNMWWAQT 94
>UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=3; Magnetospirillum|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 560
Score = 42.3 bits (95), Expect = 0.011
Identities = 25/102 (24%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
Frame = -2
Query: 482 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFT 303
L + +GG++GV + I+I +H+T YV HFH ++ P+
Sbjct: 351 LSLILFGFLGGISGVTMGVEQINIMIHNTIYVPGHFHATVAAGTTLAFMAITYFLVPVLF 410
Query: 302 GLSL-NSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSD 180
G L + K+Q + +G+ + G G+ RR+ D
Sbjct: 411 GRELILPGLAKLQPYLFGLGMGVFSLFMMGAGTLGVSRRHWD 452
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 41.5 bits (93), Expect = 0.019
Identities = 14/32 (43%), Positives = 25/32 (78%)
Frame = -2
Query: 467 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 372
LF +GG+TG++ A+ ++++ +H+T YV HFH
Sbjct: 354 LFFIGGITGIVNASYNVNLVVHNTAYVPGHFH 385
>UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1;
Rhodothermus marinus|Rep: Heme-copper oxygen reductase -
Rhodothermus marinus (Rhodothermus obamensis)
Length = 561
Score = 41.1 bits (92), Expect = 0.025
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = -2
Query: 503 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXI 324
+P++ +L + F GG+TG+I A+ +++ +H+T +V HFH +
Sbjct: 346 DPSLSAQLLAMITFVFGGITGLINASFTMNQVVHNTTWVPGHFHMTVGSAVAMTFMGVAY 405
Query: 323 N*YPLFTGLSLNSYILKIQFFTIF-IGVNITFFPQHFLGLAGIPRR 189
P TG L + + I+ IG+ I GL G+PRR
Sbjct: 406 WMVPYLTGKKLWGRKVALASNWIYTIGLLIFARGMISAGLEGMPRR 451
>UniRef50_Q34505 Cluster: Cytochrome c oxidase subunit I; n=46;
Neoptera|Rep: Cytochrome c oxidase subunit I - Eueides
tales
Length = 95
Score = 40.7 bits (91), Expect = 0.033
Identities = 23/59 (38%), Positives = 26/59 (44%)
Frame = -2
Query: 188 YSDYPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINQRINLFSLNLPSSIE*YQNY 12
YSDYPD INQR+ LFSLN+PSSIE YQN+
Sbjct: 1 YSDYPDNYMSWNIISSFGSYISLFSMILIIIIIWESMINQRMILFSLNMPSSIEWYQNF 59
>UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit I;
n=1; Aeropyrum pernix|Rep: Cytochrome c oxidase
(Ba3-type) subunit I - Aeropyrum pernix
Length = 548
Score = 39.5 bits (88), Expect = 0.076
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = -2
Query: 473 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 372
+ LF GG+TG+I A+ ++ +H+T ++V HFH
Sbjct: 340 IILFANGGITGIINASFQLNTVVHNTTWIVGHFH 373
>UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase,
subunit I 3; n=1; Natronomonas pharaonis DSM 2160|Rep:
Cytochrome-c-like terminal oxidase, subunit I 3 -
Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)
Length = 575
Score = 37.1 bits (82), Expect = 0.41
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Frame = -2
Query: 599 AYFTSATIIIAVPTGIKIFR*LATIHGTQINY-------NPNIL*RLGFVFLFT-VGGLT 444
A F S A+P G++ R + G + NP + + LF +GG+T
Sbjct: 316 AAFASMIHAFAIPAGLEAGRRQRGLGGGLFGWLTSGPWKNPVFSATIFSIILFGFMGGIT 375
Query: 443 GVILANSSIDITLHDTYYVVAHFH 372
GV++ +++T H+T+ V HFH
Sbjct: 376 GVLMGQLQLNMTWHNTFATVGHFH 399
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 36.7 bits (81), Expect = 0.54
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -2
Query: 74 NQRINLFSLNLPSSIE*YQN 15
NQRI LFSLN+PSSIE YQN
Sbjct: 451 NQRIILFSLNMPSSIEWYQN 470
>UniRef50_Q9EMW4 Cluster: AMV085; n=1; Amsacta moorei entomopoxvirus
'L'|Rep: AMV085 - Amsacta moorei entomopoxvirus (AmEPV)
Length = 204
Score = 34.7 bits (76), Expect = 2.2
Identities = 16/57 (28%), Positives = 33/57 (57%)
Frame = -1
Query: 333 GIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLIY 163
G+Y +I Y+ + LY K IF +I++ KYN++ + + +N + F +++ I+
Sbjct: 18 GLYDIIP--YKASLSILYNKKIIFNDIFFIKYNLYESRVDKKKFNNAISFLMNKNIF 72
>UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome c ba(3) subunit I); n=4; Deinococci|Rep:
Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome
c oxidase polypeptide I) (Cytochrome c ba(3) subunit I)
- Thermus thermophilus
Length = 108
Score = 33.5 bits (73), Expect = 5.0
Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 3/88 (3%)
Frame = -2
Query: 464 FTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLSXXXXXXXXXXXIN*YPLFTGLSLNS 285
F GG G++ A+ ++D +H+T +V HFH ++ P TG ++
Sbjct: 21 FIPGGAGGIVNASFTLDYVVHNTAWVPGHFHLQVASLVTLTAMGSLYWLLPNLTGKPISD 80
Query: 284 YILKIQFFTI---FIGVNITFFPQHFLG 210
++ + F+G+ I H+ G
Sbjct: 81 AQRRLGLAVVWLWFLGMMIMAVGLHWAG 108
>UniRef50_A5I8K9 Cluster: Putative uncharacterized protein; n=1;
Tribolium castaneum|Rep: Putative uncharacterized
protein - Tribolium castaneum (Red flour beetle)
Length = 102
Score = 33.1 bits (72), Expect = 6.6
Identities = 32/102 (31%), Positives = 38/102 (37%)
Frame = -1
Query: 489 MKIRFCIFIHSRRINRCNFSQFFXXXXXXXYXXXXXXXXXXXXXXXXICNYWGIY*LISF 310
M R CI I S R N NFS+F + I I LI
Sbjct: 1 MSTRICIPISSGRTNGSNFSKFINCHYTSGHLLGSSSLPLRSFYRSRIRYQGRISSLILP 60
Query: 309 IYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIF 184
IY K + +I +I SK NI S+ F R N TIF
Sbjct: 61 IYGLSTKPKIMQGAISNHIQGSKPNILSSAFPRLKRNARTIF 102
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 434,558,031
Number of Sequences: 1657284
Number of extensions: 6454792
Number of successful extensions: 15446
Number of sequences better than 10.0: 112
Number of HSP's better than 10.0 without gapping: 14957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15368
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -