Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV11g01f
         (600 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC021215-1|AAH21215.1|  442|Homo sapiens chromosome 5 open readi...    30   5.4  
X05839-1|CAA29283.1|  390|Homo sapiens transforming growth facto...    29   9.4  
X02812-1|CAA26580.1|  391|Homo sapiens protein ( Human mRNA for ...    29   9.4  
M38449-1|AAA36735.1|  112|Homo sapiens transforming growth facto...    29   9.4  
BT007245-1|AAP35909.1|  390|Homo sapiens transforming growth fac...    29   9.4  
BC022242-1|AAH22242.1|  390|Homo sapiens transforming growth fac...    29   9.4  
BC001180-1|AAH01180.1|  390|Homo sapiens transforming growth fac...    29   9.4  
BC000125-1|AAH00125.1|  390|Homo sapiens transforming growth fac...    29   9.4  
AK002055-1|BAA92060.1|  442|Homo sapiens protein ( Homo sapiens ...    29   9.4  

>BC021215-1|AAH21215.1|  442|Homo sapiens chromosome 5 open reading
           frame 22 protein.
          Length = 442

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 14/49 (28%), Positives = 19/49 (38%)
 Frame = +1

Query: 4   KIPNIAMKRXXXXXXXXXXXXXXGTELPLATPCDEEACKLPDCRCSSTN 150
           K P +A++               G E   AT   ++ C  P C CSS N
Sbjct: 178 KKPKLALEDSENTASTNCDSSSEGLEKDTATQRSDQTCLEPSCSCSSEN 226


>X05839-1|CAA29283.1|  390|Homo sapiens transforming growth factor
           beta 1 precursor protein.
          Length = 390

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 258 PQQLEPLPSRSYLLRQPRVHKLS 326
           PQ LEPLP   Y+ R+P+V +LS
Sbjct: 358 PQALEPLPIVYYVGRKPKVEQLS 380


>X02812-1|CAA26580.1|  391|Homo sapiens protein ( Human mRNA for
           transforming growth factor-beta (TGF-beta). ).
          Length = 391

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 258 PQQLEPLPSRSYLLRQPRVHKLS 326
           PQ LEPLP   Y+ R+P+V +LS
Sbjct: 359 PQALEPLPIVYYVGRKPKVEQLS 381


>M38449-1|AAA36735.1|  112|Homo sapiens transforming growth
           factor-beta protein.
          Length = 112

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 258 PQQLEPLPSRSYLLRQPRVHKLS 326
           PQ LEPLP   Y+ R+P+V +LS
Sbjct: 80  PQALEPLPIVYYVGRKPKVEQLS 102


>BT007245-1|AAP35909.1|  390|Homo sapiens transforming growth
           factor, beta 1 (Camurati-Engelmann disease) protein.
          Length = 390

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 258 PQQLEPLPSRSYLLRQPRVHKLS 326
           PQ LEPLP   Y+ R+P+V +LS
Sbjct: 358 PQALEPLPIVYYVGRKPKVEQLS 380


>BC022242-1|AAH22242.1|  390|Homo sapiens transforming growth
           factor, beta 1 protein.
          Length = 390

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 258 PQQLEPLPSRSYLLRQPRVHKLS 326
           PQ LEPLP   Y+ R+P+V +LS
Sbjct: 358 PQALEPLPIVYYVGRKPKVEQLS 380


>BC001180-1|AAH01180.1|  390|Homo sapiens transforming growth
           factor, beta 1 protein.
          Length = 390

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 258 PQQLEPLPSRSYLLRQPRVHKLS 326
           PQ LEPLP   Y+ R+P+V +LS
Sbjct: 358 PQALEPLPIVYYVGRKPKVEQLS 380


>BC000125-1|AAH00125.1|  390|Homo sapiens transforming growth
           factor, beta 1 protein.
          Length = 390

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 13/23 (56%), Positives = 17/23 (73%)
 Frame = +3

Query: 258 PQQLEPLPSRSYLLRQPRVHKLS 326
           PQ LEPLP   Y+ R+P+V +LS
Sbjct: 358 PQALEPLPIVYYVGRKPKVEQLS 380


>AK002055-1|BAA92060.1|  442|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11193 fis, clone PLACE1007621. ).
          Length = 442

 Score = 29.5 bits (63), Expect = 9.4
 Identities = 14/49 (28%), Positives = 19/49 (38%)
 Frame = +1

Query: 4   KIPNIAMKRXXXXXXXXXXXXXXGTELPLATPCDEEACKLPDCRCSSTN 150
           K P +A++               G E   AT   ++ C  P C CSS N
Sbjct: 178 KKPKLALEDSENTASTNCDSSPEGLEKDTATQRSDQTCLEPSCSCSSEN 226


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,166,262
Number of Sequences: 237096
Number of extensions: 2088191
Number of successful extensions: 5797
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5797
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)